RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 DDX19BQ9UMR2 479 aa24.04■■□□□ 1.44
TRIM47-201ENST00000254816 BTG4Q9NY30 223 aa24.03■■□□□ 1.44
TRIM47-201ENST00000254816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.03■■□□□ 1.44
TRIM47-201ENST00000254816 OVOS2A0A0G2JMS6 1433 aa24.03■■□□□ 1.44
TRIM47-201ENST00000254816 KDM6AO15550 1401 aaPredicted RBP24.03■■□□□ 1.44
TRIM47-201ENST00000254816 COL14A1Q05707 1796 aaKnown RBP24.03■■□□□ 1.44
TRIM47-201ENST00000254816 CYP27B1O15528 508 aa24.02■■□□□ 1.44
TRIM47-201ENST00000254816 EIF4A1P60842 406 aaKnown RBP24.01■■□□□ 1.43
TRIM47-201ENST00000254816 IFNL2Q8IZJ0 200 aa24.01■■□□□ 1.43
TRIM47-201ENST00000254816 ABCC4O15439 1325 aa24.01■■□□□ 1.43
TRIM47-201ENST00000254816 CARD10Q9BWT7 1032 aa24.01■■□□□ 1.43
TRIM47-201ENST00000254816 USP35Q9P2H5 1018 aa24.01■■□□□ 1.43
TRIM47-201ENST00000254816 AAMPQ13685 434 aa24■■□□□ 1.43
TRIM47-201ENST00000254816 G2E3Q7L622 706 aa24■■□□□ 1.43
TRIM47-201ENST00000254816 API5Q9BZZ5 524 aaKnown RBP24■■□□□ 1.43
TRIM47-201ENST00000254816 CACNA1FO60840 1977 aa23.99■■□□□ 1.43
TRIM47-201ENST00000254816 UBAP1LF5GYI3 381 aa23.99■■□□□ 1.43
TRIM47-201ENST00000254816 RGS12O14924 1447 aa23.98■■□□□ 1.43
TRIM47-201ENST00000254816 SHANK3Q9BYB0 1731 aa23.98■■□□□ 1.43
TRIM47-201ENST00000254816 CCDC30Q5VVM6 783 aa23.98■■□□□ 1.43
TRIM47-201ENST00000254816 STK31Q9BXU1 1019 aa23.97■■□□□ 1.43
TRIM47-201ENST00000254816 IL2RBP14784 551 aa23.96■■□□□ 1.43
TRIM47-201ENST00000254816 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
TRIM47-201ENST00000254816 PLEKHG2Q9H7P9 1386 aa23.96■■□□□ 1.43
TRIM47-201ENST00000254816 ADAMTS2O95450 1211 aa23.96■■□□□ 1.43
TRIM47-201ENST00000254816 ZBTB40Q9NUA8 1239 aa23.96■■□□□ 1.43
TRIM47-201ENST00000254816 EIF2S2P20042 333 aaKnown RBP23.95■■□□□ 1.43
TRIM47-201ENST00000254816 HDGFL1Q5TGJ6 251 aa23.95■■□□□ 1.43
TRIM47-201ENST00000254816 ERICH6Q7L0X2 663 aa23.95■■□□□ 1.43
TRIM47-201ENST00000254816 NFATC2IPQ8NCF5 419 aa23.95■■□□□ 1.43
TRIM47-201ENST00000254816 ZCRB1Q8TBF4 217 aaKnown RBP23.95■■□□□ 1.43
TRIM47-201ENST00000254816 SLC52A2Q9HAB3 445 aa23.95■■□□□ 1.43
TRIM47-201ENST00000254816 PTPRCP08575 1304 aa23.95■■□□□ 1.42
TRIM47-201ENST00000254816 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
TRIM47-201ENST00000254816 ZBTB7BO15156 539 aaPredicted RBP23.94■■□□□ 1.42
TRIM47-201ENST00000254816 SLC39A6Q13433 755 aa23.94■■□□□ 1.42
TRIM47-201ENST00000254816 DCAF5Q96JK2 942 aa23.94■■□□□ 1.42
TRIM47-201ENST00000254816 SOS1Q07889 1333 aaPredicted RBP23.93■■□□□ 1.42
TRIM47-201ENST00000254816 NUTM2BA6NNL0 878 aaPredicted RBP23.93■■□□□ 1.42
TRIM47-201ENST00000254816 NUTM2EB1AL46 878 aaPredicted RBP23.93■■□□□ 1.42
TRIM47-201ENST00000254816 NUTM2AQ8IVF1 878 aaPredicted RBP23.93■■□□□ 1.42
TRIM47-201ENST00000254816 PCDH11XQ9BZA7 1347 aa23.92■■□□□ 1.42
TRIM47-201ENST00000254816 PCDH11YQ9BZA8 1340 aa23.92■■□□□ 1.42
TRIM47-201ENST00000254816 PRAMEF22A3QJZ6 481 aa23.91■■□□□ 1.42
TRIM47-201ENST00000254816 F6X3S4 739 aa23.91■■□□□ 1.42
TRIM47-201ENST00000254816 DDX54Q8TDD1 881 aaKnown RBP23.91■■□□□ 1.42
TRIM47-201ENST00000254816 C1orf115Q9H7X2 142 aa23.91■■□□□ 1.42
TRIM47-201ENST00000254816 HSP90AB1P08238 724 aaKnown RBP23.9■■□□□ 1.42
TRIM47-201ENST00000254816 FLIIQ13045 1269 aa23.9■■□□□ 1.42
TRIM47-201ENST00000254816 MRC1P22897 1456 aa23.9■■□□□ 1.42
TRIM47-201ENST00000254816 RWDD1Q9H446 243 aaPredicted RBP23.9■■□□□ 1.42
TRIM47-201ENST00000254816 INTS3Q68E01 1043 aaKnown RBP23.89■■□□□ 1.42
TRIM47-201ENST00000254816 C5P01031 1676 aa23.89■■□□□ 1.41
TRIM47-201ENST00000254816 ZNF790Q6PG37 636 aa23.89■■□□□ 1.41
TRIM47-201ENST00000254816 PHAXQ9H814 394 aaKnown RBP23.89■■□□□ 1.41
TRIM47-201ENST00000254816 GIGYF1O75420 1035 aaPredicted RBP23.88■■□□□ 1.41
TRIM47-201ENST00000254816 HOXB7P09629 217 aa23.88■■□□□ 1.41
TRIM47-201ENST00000254816 SLC4A10Q6U841 1118 aa23.88■■□□□ 1.41
TRIM47-201ENST00000254816 CHPF2Q9P2E5 772 aa23.88■■□□□ 1.41
TRIM47-201ENST00000254816 CABP4P57796 275 aa23.87■■□□□ 1.41
TRIM47-201ENST00000254816 FKBP5Q13451 457 aaPredicted RBP23.87■■□□□ 1.41
TRIM47-201ENST00000254816 HEG1Q9ULI3 1381 aa23.87■■□□□ 1.41
TRIM47-201ENST00000254816 ANXA1P04083 346 aa23.87■■□□□ 1.41
TRIM47-201ENST00000254816 NRAPQ86VF7 1730 aa23.86■■□□□ 1.41
TRIM47-201ENST00000254816 RGS3P49796 1198 aa23.86■■□□□ 1.41
TRIM47-201ENST00000254816 WNK3Q9BYP7 1800 aa23.85■■□□□ 1.41
TRIM47-201ENST00000254816 CHMP4BQ9H444 224 aaKnown RBP23.84■■□□□ 1.41
TRIM47-201ENST00000254816 TOGARAM1Q9Y4F4 1720 aa23.84■■□□□ 1.41
TRIM47-201ENST00000254816 ANP32AP39687 249 aaKnown RBP23.83■■□□□ 1.41
TRIM47-201ENST00000254816 HDAC1Q13547 482 aaPredicted RBP23.83■■□□□ 1.41
TRIM47-201ENST00000254816 ZNF496Q96IT1 587 aaPredicted RBP23.82■■□□□ 1.4
TRIM47-201ENST00000254816 DISP2A7MBM2 1401 aa23.81■■□□□ 1.4
TRIM47-201ENST00000254816 PDE4AP27815 886 aa23.81■■□□□ 1.4
TRIM47-201ENST00000254816 NKX1-1Q15270 411 aaPredicted RBP23.81■■□□□ 1.4
TRIM47-201ENST00000254816 TTC5Q8N0Z6 440 aa23.81■■□□□ 1.4
TRIM47-201ENST00000254816 N4BP2Q86UW6 1770 aaPredicted RBP23.81■■□□□ 1.4
TRIM47-201ENST00000254816 PROSER3Q2NL68 480 aa23.81■■□□□ 1.4
TRIM47-201ENST00000254816 MEIS3Q99687 375 aa23.8■■□□□ 1.4
TRIM47-201ENST00000254816 PDZRN3Q9UPQ7 1066 aa23.8■■□□□ 1.4
TRIM47-201ENST00000254816 NOP58Q9Y2X3 529 aaKnown RBP23.8■■□□□ 1.4
TRIM47-201ENST00000254816 CERKQ8TCT0 537 aa23.8■■□□□ 1.4
TRIM47-201ENST00000254816 DBF4Q9UBU7 674 aaPredicted RBP23.79■■□□□ 1.4
TRIM47-201ENST00000254816 KAT6BQ8WYB5 2073 aa23.79■■□□□ 1.4
TRIM47-201ENST00000254816 CCT4P50991 539 aaKnown RBP23.79■■□□□ 1.4
TRIM47-201ENST00000254816 ERVV-2B6SEH9 535 aa23.78■■□□□ 1.4
TRIM47-201ENST00000254816 NPM2Q86SE8 214 aaKnown RBP23.78■■□□□ 1.4
TRIM47-201ENST00000254816 SIRT2Q8IXJ6 389 aa23.78■■□□□ 1.4
TRIM47-201ENST00000254816 CHMP4AQ9BY43 222 aa23.78■■□□□ 1.4
TRIM47-201ENST00000254816 NWD2Q9ULI1 1742 aa23.78■■□□□ 1.4
TRIM47-201ENST00000254816 ITGB4P16144 1822 aa23.77■■□□□ 1.4
TRIM47-201ENST00000254816 GLI3P10071 1580 aa23.76■■□□□ 1.39
TRIM47-201ENST00000254816 BACH2Q9BYV9 841 aa23.76■■□□□ 1.39
TRIM47-201ENST00000254816 UBR2Q8IWV8 1755 aa23.76■■□□□ 1.39
TRIM47-201ENST00000254816 PAPPAQ13219 1627 aa23.76■■□□□ 1.39
TRIM47-201ENST00000254816 IPO9Q96P70 1041 aaKnown RBP23.76■■□□□ 1.39
TRIM47-201ENST00000254816 FMNL2Q96PY5 1086 aa23.76■■□□□ 1.39
TRIM47-201ENST00000254816 USP16Q9Y5T5 823 aa23.75■■□□□ 1.39
TRIM47-201ENST00000254816 SPATA31A1Q5TZJ5 1347 aa23.75■■□□□ 1.39
TRIM47-201ENST00000254816 SLIT2O94813 1529 aa23.74■■□□□ 1.39
TRIM47-201ENST00000254816 SMC5Q8IY18 1101 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms