RNA–Protein interactions for RNA: ENST00000254037.6

ZCCHC9-201, Transcript of zinc finger CCHC-type containing 9, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZCCHC9, Length 4,606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-201ENST00000254037 DNA2P51530 1060 aa13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 BMS1Q14692 1282 aaKnown RBP13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 SPECC1Q5M775 1068 aa13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 MAGI1Q96QZ7 1491 aaPredicted RBP13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 IGSF3O75054 1194 aa13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 CASTP20810 708 aaKnown RBP13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 C20orf194Q5TEA3 1177 aa13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 HDGFL1Q5TGJ6 251 aa13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 ZSWIM4Q9H7M6 989 aa13.97□□□□□ -0.17
ZCCHC9-201ENST00000254037 FAM177BA6PVY3 158 aa13.96□□□□□ -0.17
ZCCHC9-201ENST00000254037 MCM5P33992 734 aa13.96□□□□□ -0.17
ZCCHC9-201ENST00000254037 NUTM2GQ5VZR2 741 aa13.96□□□□□ -0.17
ZCCHC9-201ENST00000254037 CASQ1P31415 396 aa13.96□□□□□ -0.17
ZCCHC9-201ENST00000254037 IMMTQ16891 758 aaKnown RBP13.96□□□□□ -0.17
ZCCHC9-201ENST00000254037 FAM107BQ9H098 131 aa13.96□□□□□ -0.17
ZCCHC9-201ENST00000254037 PANK2Q9BZ23 570 aa13.96□□□□□ -0.18
ZCCHC9-201ENST00000254037 SCAND2PQ9GZW5 306 aaPredicted RBP13.96□□□□□ -0.18
ZCCHC9-201ENST00000254037 RPRD2Q5VT52 1461 aaKnown RBP13.96□□□□□ -0.18
ZCCHC9-201ENST00000254037 CPLX3Q8WVH0 158 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 SRGAP3O43295 1099 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 PSME1Q06323 249 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 DNAAF4Q8WXU2 420 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 SRCIN1Q9C0H9 1055 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 XRCC6P12956 609 aaKnown RBP eCLIP13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 CCT4P50991 539 aaKnown RBP13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 LUZP1Q86V48 1076 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 PRIMPOLQ96LW4 560 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 NLRP2Q9NX02 1062 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
ZCCHC9-201ENST00000254037 CCDC141Q6ZP82 1450 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 KRT222Q8N1A0 295 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 IFFO1Q0D2I5 559 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 CCDC175P0C221 793 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 GTF2A1P52655 376 aaPredicted RBP13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 SPA17Q15506 151 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 CCDC158Q5M9N0 1113 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 WDR63Q8IWG1 891 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 ZNF830Q96NB3 372 aaPredicted RBP13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 SLC26A8Q96RN1 970 aa13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 NOL7Q9UMY1 257 aaKnown RBP13.94□□□□□ -0.18
ZCCHC9-201ENST00000254037 CCDC69A6NI79 296 aa13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 NLRP6P59044 892 aa13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 AACSQ86V21 672 aa13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 PDIA4P13667 645 aaKnown RBP13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 PAFAH1B1P43034 410 aa13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 MICALCLQ6ZW33 695 aa13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 RBM27Q9P2N5 1060 aaKnown RBP13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 NF2P35240 595 aa13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 TMEM132AQ24JP5 1023 aa13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 TFIP11Q9UBB9 837 aaKnown RBP13.93□□□□□ -0.18
ZCCHC9-201ENST00000254037 GBP2P32456 591 aaPredicted RBP13.92□□□□□ -0.18
ZCCHC9-201ENST00000254037 ZNF165P49910 485 aa13.92□□□□□ -0.18
ZCCHC9-201ENST00000254037 HCLS1P14317 486 aaPredicted RBP13.92□□□□□ -0.18
ZCCHC9-201ENST00000254037 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
ZCCHC9-201ENST00000254037 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
ZCCHC9-201ENST00000254037 FKBP4Q02790 459 aaKnown RBP eCLIP13.92□□□□□ -0.18
ZCCHC9-201ENST00000254037 KRT32Q14532 448 aa13.92□□□□□ -0.18
ZCCHC9-201ENST00000254037 RPAP2Q8IXW5 612 aaPredicted RBP13.92□□□□□ -0.18
ZCCHC9-201ENST00000254037 SNW1Q13573 536 aaKnown RBP13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 HLTFQ14527 1009 aaKnown RBP eCLIP13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 GAS2L2Q8NHY3 880 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 CDKL5O76039 1030 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 TTC39AQ5SRH9 613 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 CTR9Q6PD62 1173 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 NEMFO60524 1076 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 SLC3A2P08195 630 aaKnown RBP13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 SSR1P43307 286 aaKnown RBP13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 NACAP1Q9BZK3 213 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 BIN1O00499 593 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 GUCY1B3Q02153 619 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 SULT6B1Q6IMI4 303 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 TMC6Q7Z403 805 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 NUTM1Q86Y26 1132 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 LARP6Q9BRS8 491 aaKnown RBP13.91□□□□□ -0.18
ZCCHC9-201ENST00000254037 GSTTP1A0A1W2PQM5 241 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 MCM3P25205 808 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 ZNF397Q8NF99 534 aaPredicted RBP13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 ATP2C2O75185 946 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 GNG11P61952 73 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 SMC1AQ14683 1233 aaKnown RBP13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 KLHL40Q2TBA0 621 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 PRPF40BQ6NWY9 871 aaKnown RBP13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 CNNM1Q9NRU3 951 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 RSPH14Q9UHP6 348 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 SLFN5Q08AF3 891 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 UBE4AQ14139 1066 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 CEP135Q66GS9 1140 aa13.9□□□□□ -0.18
ZCCHC9-201ENST00000254037 NOLC1Q14978 699 aaKnown RBP eCLIP13.89□□□□□ -0.19
ZCCHC9-201ENST00000254037 RNF216Q9NWF9 866 aaPredicted RBP13.89□□□□□ -0.19
ZCCHC9-201ENST00000254037 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms