RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 INTS3Q68E01 1043 aaKnown RBP18.49■□□□□ 0.55
SAFB2-201ENST00000252542 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
SAFB2-201ENST00000252542 SRCIN1Q9C0H9 1055 aa18.48■□□□□ 0.55
SAFB2-201ENST00000252542 CWF19L2Q2TBE0 894 aaKnown RBP18.48■□□□□ 0.55
SAFB2-201ENST00000252542 UPF3BQ9BZI7 483 aaKnown RBP18.48■□□□□ 0.55
SAFB2-201ENST00000252542 PANK2Q9BZ23 570 aa18.47■□□□□ 0.55
SAFB2-201ENST00000252542 LRRCC1Q9C099 1032 aa18.47■□□□□ 0.55
SAFB2-201ENST00000252542 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
SAFB2-201ENST00000252542 AXIN2Q9Y2T1 843 aa18.47■□□□□ 0.55
SAFB2-201ENST00000252542 PIK3R4Q99570 1358 aa18.47■□□□□ 0.55
SAFB2-201ENST00000252542 NBPF7P0C2Y1 421 aaPredicted RBP18.47■□□□□ 0.55
SAFB2-201ENST00000252542 TTC22Q5TAA0 569 aa18.47■□□□□ 0.55
SAFB2-201ENST00000252542 UBE2Q2Q8WVN8 375 aa18.47■□□□□ 0.55
SAFB2-201ENST00000252542 CHAMP1Q96JM3 812 aa18.47■□□□□ 0.55
SAFB2-201ENST00000252542 MED14O60244 1454 aa18.46■□□□□ 0.55
SAFB2-201ENST00000252542 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
SAFB2-201ENST00000252542 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
SAFB2-201ENST00000252542 PA2G4Q9UQ80 394 aaKnown RBP18.46■□□□□ 0.55
SAFB2-201ENST00000252542 GNAI3P08754 354 aa18.45■□□□□ 0.54
SAFB2-201ENST00000252542 NEK4P51957 841 aa18.45■□□□□ 0.54
SAFB2-201ENST00000252542 IP6K1Q92551 441 aa18.45■□□□□ 0.54
SAFB2-201ENST00000252542 PTPRCP08575 1304 aa18.45■□□□□ 0.54
SAFB2-201ENST00000252542 IGSF1Q8N6C5 1336 aa18.45■□□□□ 0.54
SAFB2-201ENST00000252542 PROSER3Q2NL68 480 aa18.44■□□□□ 0.54
SAFB2-201ENST00000252542 RTL1A6NKG5 1358 aa18.44■□□□□ 0.54
SAFB2-201ENST00000252542 MCM4P33991 863 aa18.44■□□□□ 0.54
SAFB2-201ENST00000252542 RIC3Q7Z5B4 369 aa18.44■□□□□ 0.54
SAFB2-201ENST00000252542 TRAK2O60296 914 aa18.43■□□□□ 0.54
SAFB2-201ENST00000252542 KCNJ4P48050 445 aa18.43■□□□□ 0.54
SAFB2-201ENST00000252542 SSFA2P28290 1259 aa18.43■□□□□ 0.54
SAFB2-201ENST00000252542 DLC1Q96QB1 1528 aa18.43■□□□□ 0.54
SAFB2-201ENST00000252542 PTCD1O75127 700 aaKnown RBP18.42■□□□□ 0.54
SAFB2-201ENST00000252542 PDE1AP54750 535 aa18.42■□□□□ 0.54
SAFB2-201ENST00000252542 NFATC2IPQ8NCF5 419 aa18.42■□□□□ 0.54
SAFB2-201ENST00000252542 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
SAFB2-201ENST00000252542 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
SAFB2-201ENST00000252542 KAT6BQ8WYB5 2073 aa18.42■□□□□ 0.54
SAFB2-201ENST00000252542 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
SAFB2-201ENST00000252542 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
SAFB2-201ENST00000252542 CDC42BPGQ6DT37 1551 aa18.41■□□□□ 0.54
SAFB2-201ENST00000252542 MX1P20591 662 aa18.41■□□□□ 0.54
SAFB2-201ENST00000252542 OVOS2A0A0J9YW53 1432 aa18.41■□□□□ 0.54
SAFB2-201ENST00000252542 OVOS2Q6IE36 1432 aa18.41■□□□□ 0.54
SAFB2-201ENST00000252542 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
SAFB2-201ENST00000252542 XRCC6P12956 609 aaKnown RBP eCLIP18.41■□□□□ 0.54
SAFB2-201ENST00000252542 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
SAFB2-201ENST00000252542 DNAAF4Q8WXU2 420 aa18.4■□□□□ 0.54
SAFB2-201ENST00000252542 TNPO1Q92973 898 aaKnown RBP18.4■□□□□ 0.54
SAFB2-201ENST00000252542 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
SAFB2-201ENST00000252542 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
SAFB2-201ENST00000252542 ATP5J2-PTCD1G3V325 749 aa18.4■□□□□ 0.54
SAFB2-201ENST00000252542 MCTP1Q6DN14 999 aa18.4■□□□□ 0.54
SAFB2-201ENST00000252542 CWC27Q6UX04 472 aaKnown RBP18.4■□□□□ 0.54
SAFB2-201ENST00000252542 UNC5CLQ8IV45 518 aa18.39■□□□□ 0.53
SAFB2-201ENST00000252542 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
SAFB2-201ENST00000252542 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
SAFB2-201ENST00000252542 ZGPATQ8N5A5 531 aaKnown RBP18.38■□□□□ 0.53
SAFB2-201ENST00000252542 REC8O95072 547 aa18.38■□□□□ 0.53
SAFB2-201ENST00000252542 CCDC8Q9H0W5 538 aaPredicted RBP18.38■□□□□ 0.53
SAFB2-201ENST00000252542 SPG7Q9UQ90 795 aa18.38■□□□□ 0.53
SAFB2-201ENST00000252542 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
SAFB2-201ENST00000252542 ANTXR1Q9H6X2 564 aa18.38■□□□□ 0.53
SAFB2-201ENST00000252542 CEP170BQ9Y4F5 1589 aaPredicted RBP18.37■□□□□ 0.53
SAFB2-201ENST00000252542 ARHGEF10O15013 1369 aa18.37■□□□□ 0.53
SAFB2-201ENST00000252542 ERC2O15083 957 aa18.37■□□□□ 0.53
SAFB2-201ENST00000252542 ST18O60284 1047 aa18.37■□□□□ 0.53
SAFB2-201ENST00000252542 EIF4A1P60842 406 aaKnown RBP18.37■□□□□ 0.53
SAFB2-201ENST00000252542 PKP1Q13835 747 aa18.36■□□□□ 0.53
SAFB2-201ENST00000252542 SYTL4Q96C24 671 aaPredicted RBP18.36■□□□□ 0.53
SAFB2-201ENST00000252542 TRIM44Q96DX7 344 aaPredicted RBP18.36■□□□□ 0.53
SAFB2-201ENST00000252542 DDX49Q9Y6V7 483 aaKnown RBP18.36■□□□□ 0.53
SAFB2-201ENST00000252542 TECPR2O15040 1411 aa18.36■□□□□ 0.53
SAFB2-201ENST00000252542 PTCH1Q13635 1447 aa18.36■□□□□ 0.53
SAFB2-201ENST00000252542 TOM1L2Q6ZVM7 507 aa18.36■□□□□ 0.53
SAFB2-201ENST00000252542 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
SAFB2-201ENST00000252542 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.36■□□□□ 0.53
SAFB2-201ENST00000252542 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
SAFB2-201ENST00000252542 CRB1P82279 1406 aa18.35■□□□□ 0.53
SAFB2-201ENST00000252542 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
SAFB2-201ENST00000252542 PRDM11Q9NQV5 511 aa18.35■□□□□ 0.53
SAFB2-201ENST00000252542 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
SAFB2-201ENST00000252542 NRXN3Q9Y4C0 1643 aa18.35■□□□□ 0.53
SAFB2-201ENST00000252542 IFIT2P09913 472 aaKnown RBP18.35■□□□□ 0.53
SAFB2-201ENST00000252542 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
SAFB2-201ENST00000252542 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
SAFB2-201ENST00000252542 ATP8B2P98198 1209 aa18.34■□□□□ 0.53
SAFB2-201ENST00000252542 NDUFB9Q9Y6M9 179 aa18.34■□□□□ 0.53
SAFB2-201ENST00000252542 CPA1P15085 419 aa18.34■□□□□ 0.53
SAFB2-201ENST00000252542 EVA1CP58658 441 aa18.34■□□□□ 0.53
SAFB2-201ENST00000252542 MYD88Q99836 296 aa18.34■□□□□ 0.53
SAFB2-201ENST00000252542 USP26Q9BXU7 913 aa18.33■□□□□ 0.53
SAFB2-201ENST00000252542 USP31Q70CQ4 1352 aa18.33■□□□□ 0.53
SAFB2-201ENST00000252542 MCCP23508 829 aa18.33■□□□□ 0.52
SAFB2-201ENST00000252542 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.52
SAFB2-201ENST00000252542 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.52
SAFB2-201ENST00000252542 AKAP4Q5JQC9 854 aa18.33■□□□□ 0.52
SAFB2-201ENST00000252542 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
SAFB2-201ENST00000252542 AACSQ86V21 672 aa18.32■□□□□ 0.52
SAFB2-201ENST00000252542 RHPN1Q8TCX5 695 aa18.32■□□□□ 0.52
SAFB2-201ENST00000252542 C19orf44Q9H6X5 657 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms