RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 USP26Q9BXU7 913 aa24.16■■□□□ 1.46
CDC42EP1-201ENST00000249014 EXOC6BQ9Y2D4 811 aa24.15■■□□□ 1.46
CDC42EP1-201ENST00000249014 MED1Q15648 1581 aaPredicted RBP24.14■■□□□ 1.46
CDC42EP1-201ENST00000249014 PHRF1Q9P1Y6 1649 aaKnown RBP24.14■■□□□ 1.45
CDC42EP1-201ENST00000249014 PNMA6EA0A0J9YXQ4 647 aa24.13■■□□□ 1.45
CDC42EP1-201ENST00000249014 GNAI3P08754 354 aa24.13■■□□□ 1.45
CDC42EP1-201ENST00000249014 ZBTB7CA1YPR0 619 aa24.13■■□□□ 1.45
CDC42EP1-201ENST00000249014 EIF5BO60841 1220 aaKnown RBP24.13■■□□□ 1.45
CDC42EP1-201ENST00000249014 PDE1AP54750 535 aa24.13■■□□□ 1.45
CDC42EP1-201ENST00000249014 OSBPL3Q9H4L5 887 aa24.13■■□□□ 1.45
CDC42EP1-201ENST00000249014 LGR6Q9HBX8 967 aa24.13■■□□□ 1.45
CDC42EP1-201ENST00000249014 HDGFL1Q5TGJ6 251 aa24.12■■□□□ 1.45
CDC42EP1-201ENST00000249014 FOXD4L1Q9NU39 408 aa24.12■■□□□ 1.45
CDC42EP1-201ENST00000249014 PHAXQ9H814 394 aaKnown RBP24.12■■□□□ 1.45
CDC42EP1-201ENST00000249014 CIZ1Q9ULV3 898 aaPredicted RBP24.12■■□□□ 1.45
CDC42EP1-201ENST00000249014 KDM3BQ7LBC6 1761 aa24.12■■□□□ 1.45
CDC42EP1-201ENST00000249014 PXDNLA1KZ92 1463 aa24.11■■□□□ 1.45
CDC42EP1-201ENST00000249014 TUBGCP6Q96RT7 1819 aa24.11■■□□□ 1.45
CDC42EP1-201ENST00000249014 KCNH5Q8NCM2 988 aa24.11■■□□□ 1.45
CDC42EP1-201ENST00000249014 ATP8B2P98198 1209 aa24.1■■□□□ 1.45
CDC42EP1-201ENST00000249014 TNPO1Q92973 898 aaKnown RBP24.1■■□□□ 1.45
CDC42EP1-201ENST00000249014 LRRC59Q96AG4 307 aaKnown RBP24.1■■□□□ 1.45
CDC42EP1-201ENST00000249014 ADAMTSL3P82987 1691 aa24.1■■□□□ 1.45
CDC42EP1-201ENST00000249014 USP44Q9H0E7 712 aa24.1■■□□□ 1.45
CDC42EP1-201ENST00000249014 LRRFIP2Q9Y608 721 aaKnown RBP24.1■■□□□ 1.45
CDC42EP1-201ENST00000249014 SALL3Q9BXA9 1300 aa24.1■■□□□ 1.45
CDC42EP1-201ENST00000249014 LMO7Q8WWI1 1683 aa24.1■■□□□ 1.45
CDC42EP1-201ENST00000249014 HSP90AA1P07900 732 aaKnown RBP24.09■■□□□ 1.45
CDC42EP1-201ENST00000249014 CASC1Q6TDU7 716 aa24.09■■□□□ 1.45
CDC42EP1-201ENST00000249014 ORAI2Q96SN7 254 aa24.09■■□□□ 1.45
CDC42EP1-201ENST00000249014 XPCQ01831 940 aaPredicted RBP24.09■■□□□ 1.45
CDC42EP1-201ENST00000249014 RAB3GAP1Q15042 981 aa24.09■■□□□ 1.45
CDC42EP1-201ENST00000249014 RABEP1Q15276 862 aa24.09■■□□□ 1.45
CDC42EP1-201ENST00000249014 TRAK2O60296 914 aa24.08■■□□□ 1.45
CDC42EP1-201ENST00000249014 EIF4A1P60842 406 aaKnown RBP24.08■■□□□ 1.45
CDC42EP1-201ENST00000249014 TSHZ3Q63HK5 1081 aa24.08■■□□□ 1.45
CDC42EP1-201ENST00000249014 LRRCC1Q9C099 1032 aa24.08■■□□□ 1.45
CDC42EP1-201ENST00000249014 RTN4Q9NQC3 1192 aaKnown RBP24.07■■□□□ 1.44
CDC42EP1-201ENST00000249014 IBTKQ9P2D0 1353 aaPredicted RBP24.07■■□□□ 1.44
CDC42EP1-201ENST00000249014 NPHP4O75161 1426 aaPredicted RBP24.07■■□□□ 1.44
CDC42EP1-201ENST00000249014 KCNQ3O43525 872 aa24.06■■□□□ 1.44
CDC42EP1-201ENST00000249014 EIF2S2P20042 333 aaKnown RBP24.06■■□□□ 1.44
CDC42EP1-201ENST00000249014 DDX11L8A8MPP1 907 aa24.06■■□□□ 1.44
CDC42EP1-201ENST00000249014 GZF1Q9H116 711 aaPredicted RBP24.06■■□□□ 1.44
CDC42EP1-201ENST00000249014 PLEKHG5O94827 1062 aa24.05■■□□□ 1.44
CDC42EP1-201ENST00000249014 GCP02774 474 aa24.05■■□□□ 1.44
CDC42EP1-201ENST00000249014 UBTFL1P0CB47 393 aaPredicted RBP24.04■■□□□ 1.44
CDC42EP1-201ENST00000249014 ARHGEF25Q86VW2 580 aa24.04■■□□□ 1.44
CDC42EP1-201ENST00000249014 SLIT3O75094 1523 aa24.04■■□□□ 1.44
CDC42EP1-201ENST00000249014 ERC2O15083 957 aa24.03■■□□□ 1.44
CDC42EP1-201ENST00000249014 AKAP4Q5JQC9 854 aa24.03■■□□□ 1.44
CDC42EP1-201ENST00000249014 ZNF530Q6P9A1 599 aaPredicted RBP24.03■■□□□ 1.44
CDC42EP1-201ENST00000249014 PXDNQ92626 1479 aa24.03■■□□□ 1.44
CDC42EP1-201ENST00000249014 REC8O95072 547 aa24.03■■□□□ 1.44
CDC42EP1-201ENST00000249014 MX1P20591 662 aa24.03■■□□□ 1.44
CDC42EP1-201ENST00000249014 MPRIPQ6WCQ1 1025 aa24.03■■□□□ 1.44
CDC42EP1-201ENST00000249014 CHPF2Q9P2E5 772 aa24.03■■□□□ 1.44
CDC42EP1-201ENST00000249014 AK9Q5TCS8 1911 aa24.02■■□□□ 1.44
CDC42EP1-201ENST00000249014 NCAPD2Q15021 1401 aa24.01■■□□□ 1.43
CDC42EP1-201ENST00000249014 HOXB7P09629 217 aa24.01■■□□□ 1.43
CDC42EP1-201ENST00000249014 PLEKHO1Q53GL0 409 aaPredicted RBP24.01■■□□□ 1.43
CDC42EP1-201ENST00000249014 TRPM3Q9HCF6 1732 aaPredicted RBP24.01■■□□□ 1.43
CDC42EP1-201ENST00000249014 TEFQ10587 303 aa24.01■■□□□ 1.43
CDC42EP1-201ENST00000249014 SRCIN1Q9C0H9 1055 aa24.01■■□□□ 1.43
CDC42EP1-201ENST00000249014 BTBD11A6QL63 1104 aa24■■□□□ 1.43
CDC42EP1-201ENST00000249014 SSH3Q8TE77 659 aa24■■□□□ 1.43
CDC42EP1-201ENST00000249014 L1TD1Q5T7N2 865 aaKnown RBP23.99■■□□□ 1.43
CDC42EP1-201ENST00000249014 GBP4Q96PP9 640 aa23.99■■□□□ 1.43
CDC42EP1-201ENST00000249014 FSD2A1L4K1 749 aa23.99■■□□□ 1.43
CDC42EP1-201ENST00000249014 SSFA2P28290 1259 aa23.99■■□□□ 1.43
CDC42EP1-201ENST00000249014 LMOD2Q6P5Q4 547 aa23.99■■□□□ 1.43
CDC42EP1-201ENST00000249014 ANXA1P04083 346 aa23.98■■□□□ 1.43
CDC42EP1-201ENST00000249014 STAP2Q9UGK3 403 aa23.98■■□□□ 1.43
CDC42EP1-201ENST00000249014 PI4KAP2A4QPH2 592 aa23.98■■□□□ 1.43
CDC42EP1-201ENST00000249014 AMOTQ4VCS5 1084 aa23.98■■□□□ 1.43
CDC42EP1-201ENST00000249014 PI4KAP1Q8N8J0 262 aa23.98■■□□□ 1.43
CDC42EP1-201ENST00000249014 ANKRD24Q8TF21 1146 aa23.98■■□□□ 1.43
CDC42EP1-201ENST00000249014 AXIN2Q9Y2T1 843 aa23.98■■□□□ 1.43
CDC42EP1-201ENST00000249014 RNMTO43148 476 aaKnown RBP23.97■■□□□ 1.43
CDC42EP1-201ENST00000249014 NBPF7P0C2Y1 421 aaPredicted RBP23.97■■□□□ 1.43
CDC42EP1-201ENST00000249014 BEND3Q5T5X7 828 aa23.97■■□□□ 1.43
CDC42EP1-201ENST00000249014 PPP1R42Q7Z4L9 355 aa23.97■■□□□ 1.43
CDC42EP1-201ENST00000249014 RGPD5Q99666 1765 aa23.97■■□□□ 1.43
CDC42EP1-201ENST00000249014 CAMTA1Q9Y6Y1 1673 aa23.97■■□□□ 1.43
CDC42EP1-201ENST00000249014 POLA2Q14181 598 aa23.96■■□□□ 1.43
CDC42EP1-201ENST00000249014 DNAAF4Q8WXU2 420 aa23.96■■□□□ 1.43
CDC42EP1-201ENST00000249014 IL1RAPL2Q9NP60 686 aa23.96■■□□□ 1.43
CDC42EP1-201ENST00000249014 GOLGA6L3A6NEY3 463 aa23.96■■□□□ 1.43
CDC42EP1-201ENST00000249014 ARXQ96QS3 562 aa23.96■■□□□ 1.43
CDC42EP1-201ENST00000249014 ESYT1Q9BSJ8 1104 aa23.96■■□□□ 1.43
CDC42EP1-201ENST00000249014 ADCY9O60503 1353 aa23.95■■□□□ 1.42
CDC42EP1-201ENST00000249014 C1orf141Q5JVX7 400 aa23.95■■□□□ 1.42
CDC42EP1-201ENST00000249014 UNC5CLQ8IV45 518 aa23.95■■□□□ 1.42
CDC42EP1-201ENST00000249014 TRIM6-TRIM34B2RNG4 842 aa23.94■■□□□ 1.42
CDC42EP1-201ENST00000249014 RILPL2Q969X0 211 aa23.94■■□□□ 1.42
CDC42EP1-201ENST00000249014 ST18O60284 1047 aa23.93■■□□□ 1.42
CDC42EP1-201ENST00000249014 XRCC6P12956 609 aaKnown RBP eCLIP23.93■■□□□ 1.42
CDC42EP1-201ENST00000249014 CHMLP26374 656 aa23.93■■□□□ 1.42
CDC42EP1-201ENST00000249014 KRT28Q7Z3Y7 464 aa23.93■■□□□ 1.42
CDC42EP1-201ENST00000249014 SURF6O75683 361 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms