RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 HSP90AB3PQ58FF7 597 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 SPC24Q8NBT2 197 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 IKQ13123 557 aaPredicted RBP10.48□□□□□ -0.73
LRP1-201ENST00000243077 TMTC2Q8N394 836 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 CKAP4Q07065 602 aaKnown RBP10.48□□□□□ -0.73
LRP1-201ENST00000243077 ATL3Q6DD88 541 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 RAD21O60216 631 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 STX1AQ16623 288 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 NLRP2Q9NX02 1062 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 SEC63Q9UGP8 760 aaKnown RBP10.48□□□□□ -0.73
LRP1-201ENST00000243077 CFAP100Q494V2 611 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 TANGO6Q9C0B7 1094 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 EFCAB5A4FU69 1503 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 PRPHP41219 470 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
LRP1-201ENST00000243077 TTC21AQ8NDW8 1320 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 HMOX1P09601 288 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 TOP1P11387 765 aaKnown RBP10.47□□□□□ -0.73
LRP1-201ENST00000243077 ANAPC15P60006 121 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 BMP2KLQ5H9B9 411 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 CCDC102AQ96A19 550 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 SMARCA4P51532 1647 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 FBXW7Q969H0 707 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 EXOSC9Q06265 439 aaKnown RBP10.47□□□□□ -0.73
LRP1-201ENST00000243077 LARP1Q6PKG0 1096 aaKnown RBP10.47□□□□□ -0.73
LRP1-201ENST00000243077 TTC12Q9H892 705 aaPredicted RBP10.47□□□□□ -0.73
LRP1-201ENST00000243077 CCDC171Q6TFL3 1326 aa10.47□□□□□ -0.73
LRP1-201ENST00000243077 EHMT1Q9H9B1 1298 aa10.46□□□□□ -0.73
LRP1-201ENST00000243077 PIP4K2BP78356 416 aa10.46□□□□□ -0.73
LRP1-201ENST00000243077 AACSQ86V21 672 aa10.46□□□□□ -0.73
LRP1-201ENST00000243077 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.73
LRP1-201ENST00000243077 SREK1Q8WXA9 508 aaKnown RBP10.46□□□□□ -0.73
LRP1-201ENST00000243077 WIZO95785 1651 aa10.46□□□□□ -0.73
LRP1-201ENST00000243077 KIF5BP33176 963 aa10.46□□□□□ -0.74
LRP1-201ENST00000243077 TMEM132AQ24JP5 1023 aa10.46□□□□□ -0.74
LRP1-201ENST00000243077 JAKMIP1Q96N16 626 aaKnown RBP10.46□□□□□ -0.74
LRP1-201ENST00000243077 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.46□□□□□ -0.74
LRP1-201ENST00000243077 EVI5LQ96CN4 794 aa10.46□□□□□ -0.74
LRP1-201ENST00000243077 CCDC61Q9Y6R9 512 aa10.46□□□□□ -0.74
LRP1-201ENST00000243077 NUTM2DQ5VT03 806 aaPredicted RBP10.46□□□□□ -0.74
LRP1-201ENST00000243077 CASTP20810 708 aaKnown RBP10.46□□□□□ -0.74
LRP1-201ENST00000243077 TTF1Q15361 905 aaPredicted RBP10.46□□□□□ -0.74
LRP1-201ENST00000243077 HYPKQ9NX55 129 aa10.46□□□□□ -0.74
LRP1-201ENST00000243077 RMND1Q9NWS8 449 aa10.46□□□□□ -0.74
LRP1-201ENST00000243077 CCDC175P0C221 793 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 CEP128Q6ZU80 1094 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 KIF4BQ2VIQ3 1234 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 ZNF652Q9Y2D9 606 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 AIMP1Q12904 312 aaKnown RBP10.45□□□□□ -0.74
LRP1-201ENST00000243077 ANKS4BQ8N8V4 417 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 CABP4P57796 275 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 DHX37Q8IY37 1157 aaKnown RBP10.45□□□□□ -0.74
LRP1-201ENST00000243077 TMEM266Q2M3C6 531 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 NSD2O96028 1365 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 SRGAP3O43295 1099 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 ARHGAP45Q92619 1136 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 TMPOP42166 694 aaKnown RBP10.45□□□□□ -0.74
LRP1-201ENST00000243077 C6orf163Q5TEZ5 329 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 TIGD1Q96MW7 591 aa10.45□□□□□ -0.74
LRP1-201ENST00000243077 CDK19Q9BWU1 502 aa10.44□□□□□ -0.74
LRP1-201ENST00000243077 USP37Q86T82 979 aa10.44□□□□□ -0.74
LRP1-201ENST00000243077 SNX21Q969T3 373 aa10.44□□□□□ -0.74
LRP1-201ENST00000243077 CFAP57Q96MR6 1250 aa10.44□□□□□ -0.74
LRP1-201ENST00000243077 ERBINQ96RT1 1412 aa10.44□□□□□ -0.74
LRP1-201ENST00000243077 IGHMBP2P38935 993 aaKnown RBP10.44□□□□□ -0.74
LRP1-201ENST00000243077 SPAG1Q07617 926 aa10.44□□□□□ -0.74
LRP1-201ENST00000243077 JAKMIP2Q96AA8 810 aa10.44□□□□□ -0.74
LRP1-201ENST00000243077 GNAT3A8MTJ3 354 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 GGNBP2Q9H3C7 697 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 CENPHQ9H3R5 247 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 IFFO1Q0D2I5 559 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 TAF7Q15545 349 aaPredicted RBP10.43□□□□□ -0.74
LRP1-201ENST00000243077 LRRC45Q96CN5 670 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 C8orf76Q96K31 380 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 IQCA1Q86XH1 822 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 HDAC1Q13547 482 aaPredicted RBP10.43□□□□□ -0.74
LRP1-201ENST00000243077 MAP3K12Q12852 859 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 LMBR1Q8WVP7 490 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 PPP4R3AQ6IN85 833 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 CATIPQ7Z7H3 387 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 TEX13AQ9BXU3 409 aaPredicted RBP10.43□□□□□ -0.74
LRP1-201ENST00000243077 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 NCOA2Q15596 1464 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 KLHL40Q2TBA0 621 aa10.43□□□□□ -0.74
LRP1-201ENST00000243077 SYTL4Q96C24 671 aaPredicted RBP10.43□□□□□ -0.74
LRP1-201ENST00000243077 NKTRP30414 1462 aaKnown RBP10.43□□□□□ -0.74
LRP1-201ENST00000243077 SOS1Q07889 1333 aaPredicted RBP10.42□□□□□ -0.74
LRP1-201ENST00000243077 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
LRP1-201ENST00000243077 ZFYP08048 801 aaPredicted RBP10.42□□□□□ -0.74
LRP1-201ENST00000243077 RBM27Q9P2N5 1060 aaKnown RBP10.42□□□□□ -0.74
LRP1-201ENST00000243077 TDO2P48775 406 aa10.42□□□□□ -0.74
LRP1-201ENST00000243077 KRT222Q8N1A0 295 aa10.42□□□□□ -0.74
LRP1-201ENST00000243077 NECTIN2Q92692 538 aa10.42□□□□□ -0.74
LRP1-201ENST00000243077 ARFGAP3Q9NP61 516 aa10.42□□□□□ -0.74
LRP1-201ENST00000243077 TAX1BP1Q86VP1 789 aa10.42□□□□□ -0.74
LRP1-201ENST00000243077 SELENOOQ9BVL4 669 aa10.42□□□□□ -0.74
LRP1-201ENST00000243077 ANKRD62A6NC57 917 aa10.42□□□□□ -0.74
LRP1-201ENST00000243077 IFIT1P09914 478 aaKnown RBP10.42□□□□□ -0.74
LRP1-201ENST00000243077 OPA1O60313 960 aa10.42□□□□□ -0.74
LRP1-201ENST00000243077 CAVIN4Q5BKX8 364 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms