RNA–Protein interactions for RNA: ENST00000239165.8

HOXB7-201, Transcript of homeobox B7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB7, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB7-201ENST00000239165 ITGB4P16144 1822 aa29.33■■■□□ 2.29
HOXB7-201ENST00000239165 DCAF5Q96JK2 942 aa29.33■■■□□ 2.29
HOXB7-201ENST00000239165 PPP1R1BQ9UD71 204 aaPredicted RBP29.33■■■□□ 2.29
HOXB7-201ENST00000239165 KDM6AO15550 1401 aaPredicted RBP29.33■■■□□ 2.29
HOXB7-201ENST00000239165 QSER1Q2KHR3 1735 aa29.33■■■□□ 2.29
HOXB7-201ENST00000239165 HTATSF1O43719 755 aaKnown RBP29.32■■■□□ 2.28
HOXB7-201ENST00000239165 TMPOP42166 694 aaKnown RBP29.32■■■□□ 2.28
HOXB7-201ENST00000239165 KCNQ4P56696 695 aa29.32■■■□□ 2.28
HOXB7-201ENST00000239165 GNAT3A8MTJ3 354 aa29.31■■■□□ 2.28
HOXB7-201ENST00000239165 PTGER2P43116 358 aa29.31■■■□□ 2.28
HOXB7-201ENST00000239165 NCBP3Q53F19 620 aaKnown RBP29.3■■■□□ 2.28
HOXB7-201ENST00000239165 ATF5Q9Y2D1 282 aaPredicted RBP29.3■■■□□ 2.28
HOXB7-201ENST00000239165 APAF1O14727 1248 aa29.29■■■□□ 2.28
HOXB7-201ENST00000239165 MTFR1LQ9H019 292 aa29.29■■■□□ 2.28
HOXB7-201ENST00000239165 CCNL1Q9UK58 526 aaPredicted RBP29.28■■■□□ 2.28
HOXB7-201ENST00000239165 CEMIPQ8WUJ3 1361 aa29.28■■■□□ 2.28
HOXB7-201ENST00000239165 TUBGCP6Q96RT7 1819 aa29.28■■■□□ 2.28
HOXB7-201ENST00000239165 MPRIPQ6WCQ1 1025 aa29.27■■■□□ 2.28
HOXB7-201ENST00000239165 SCN11AQ9UI33 1791 aa29.27■■■□□ 2.28
HOXB7-201ENST00000239165 DLG5Q8TDM6 1919 aa29.27■■■□□ 2.28
HOXB7-201ENST00000239165 MRC1P22897 1456 aa29.26■■■□□ 2.27
HOXB7-201ENST00000239165 ERVV-2B6SEH9 535 aa29.26■■■□□ 2.27
HOXB7-201ENST00000239165 RNMTO43148 476 aaKnown RBP29.26■■■□□ 2.27
HOXB7-201ENST00000239165 RIPK4P57078 832 aa29.26■■■□□ 2.27
HOXB7-201ENST00000239165 SGIP1Q9BQI5 828 aa29.26■■■□□ 2.27
HOXB7-201ENST00000239165 IL17REQ8NFR9 667 aa29.25■■■□□ 2.27
HOXB7-201ENST00000239165 LGR6Q9HBX8 967 aa29.24■■■□□ 2.27
HOXB7-201ENST00000239165 LMOD3Q0VAK6 560 aa29.23■■■□□ 2.27
HOXB7-201ENST00000239165 PNPLA7Q6ZV29 1317 aa29.22■■■□□ 2.27
HOXB7-201ENST00000239165 PIGBQ92521 554 aa29.22■■■□□ 2.27
HOXB7-201ENST00000239165 RTF1Q92541 710 aaKnown RBP29.22■■■□□ 2.27
HOXB7-201ENST00000239165 TRIM35Q9UPQ4 493 aa29.22■■■□□ 2.27
HOXB7-201ENST00000239165 RRP7AQ9Y3A4 280 aaKnown RBP29.22■■■□□ 2.27
HOXB7-201ENST00000239165 PALLDQ8WX93 1383 aa29.22■■■□□ 2.27
HOXB7-201ENST00000239165 TAF1LQ8IZX4 1826 aa29.22■■■□□ 2.27
HOXB7-201ENST00000239165 CCDC27Q2M243 656 aa29.21■■■□□ 2.27
HOXB7-201ENST00000239165 NGEFQ8N5V2 710 aa29.21■■■□□ 2.27
HOXB7-201ENST00000239165 TFCP2L1Q9NZI6 479 aa29.21■■■□□ 2.27
HOXB7-201ENST00000239165 C5P01031 1676 aa29.21■■■□□ 2.27
HOXB7-201ENST00000239165 SLC16A10Q8TF71 515 aa29.2■■■□□ 2.26
HOXB7-201ENST00000239165 VIRMAQ69YN4 1812 aaKnown RBP29.19■■■□□ 2.26
HOXB7-201ENST00000239165 SMARCC1Q92922 1105 aaPredicted RBP29.19■■■□□ 2.26
HOXB7-201ENST00000239165 SLC52A2Q9HAB3 445 aa29.19■■■□□ 2.26
HOXB7-201ENST00000239165 COL24A1Q17RW2 1714 aa29.19■■■□□ 2.26
HOXB7-201ENST00000239165 MCM10Q7L590 875 aa29.18■■■□□ 2.26
HOXB7-201ENST00000239165 NEUROD2Q15784 382 aa29.17■■■□□ 2.26
HOXB7-201ENST00000239165 DCTN1Q14203 1278 aa29.16■■■□□ 2.26
HOXB7-201ENST00000239165 HMGB2P26583 209 aaKnown RBP29.15■■■□□ 2.26
HOXB7-201ENST00000239165 SIPA1L3O60292 1781 aaPredicted RBP29.15■■■□□ 2.26
HOXB7-201ENST00000239165 CABP4P57796 275 aa29.14■■■□□ 2.26
HOXB7-201ENST00000239165 TMOD3Q9NYL9 352 aa29.14■■■□□ 2.26
HOXB7-201ENST00000239165 NFATC2IPQ8NCF5 419 aa29.13■■■□□ 2.25
HOXB7-201ENST00000239165 ARXQ96QS3 562 aa29.13■■■□□ 2.25
HOXB7-201ENST00000239165 TEFQ10587 303 aa29.12■■■□□ 2.25
HOXB7-201ENST00000239165 FHDC1Q9C0D6 1143 aaPredicted RBP29.12■■■□□ 2.25
HOXB7-201ENST00000239165 C4BP0C0L5 1744 aa29.11■■■□□ 2.25
HOXB7-201ENST00000239165 COL23A1Q86Y22 540 aaPredicted RBP29.11■■■□□ 2.25
HOXB7-201ENST00000239165 WWC1Q8IX03 1113 aa29.11■■■□□ 2.25
HOXB7-201ENST00000239165 SYT17Q9BSW7 474 aa29.11■■■□□ 2.25
HOXB7-201ENST00000239165 THUMPD2Q9BTF0 503 aaKnown RBP29.11■■■□□ 2.25
HOXB7-201ENST00000239165 ASAP1Q9ULH1 1129 aa29.11■■■□□ 2.25
HOXB7-201ENST00000239165 ZNF521Q96K83 1311 aa29.08■■■□□ 2.25
HOXB7-201ENST00000239165 LOC102724428A0A0B4J2F2 783 aa29.08■■■□□ 2.25
HOXB7-201ENST00000239165 SIK1P57059 783 aa29.08■■■□□ 2.25
HOXB7-201ENST00000239165 ATG3Q9NT62 314 aa29.08■■■□□ 2.25
HOXB7-201ENST00000239165 TAF7Q15545 349 aaPredicted RBP29.07■■■□□ 2.24
HOXB7-201ENST00000239165 BABAM1Q9NWV8 329 aa29.07■■■□□ 2.24
HOXB7-201ENST00000239165 CALD1Q05682 793 aaKnown RBP29.06■■■□□ 2.24
HOXB7-201ENST00000239165 DCAF8L1A6NGE4 600 aa29.05■■■□□ 2.24
HOXB7-201ENST00000239165 UBR3Q6ZT12 1888 aa29.05■■■□□ 2.24
HOXB7-201ENST00000239165 SENP3-EIF4A1A0A087X0R7 540 aa29.04■■■□□ 2.24
HOXB7-201ENST00000239165 POLD1P28340 1107 aa29.04■■■□□ 2.24
HOXB7-201ENST00000239165 WDR63Q8IWG1 891 aa29.04■■■□□ 2.24
HOXB7-201ENST00000239165 FLAD1Q8NFF5 587 aa29.04■■■□□ 2.24
HOXB7-201ENST00000239165 IL16Q14005 1332 aa29.03■■■□□ 2.24
HOXB7-201ENST00000239165 MSH5O43196 834 aa29.03■■■□□ 2.24
HOXB7-201ENST00000239165 ZNF853P0CG23 659 aa29.02■■■□□ 2.24
HOXB7-201ENST00000239165 LINC00116Q8NCU8 138 aa29.02■■■□□ 2.24
HOXB7-201ENST00000239165 BTBD11A6QL63 1104 aa29.01■■■□□ 2.24
HOXB7-201ENST00000239165 CHL1O00533 1208 aa29.01■■■□□ 2.24
HOXB7-201ENST00000239165 ITPK1Q13572 414 aa29.01■■■□□ 2.24
HOXB7-201ENST00000239165 AK7Q96M32 723 aa29.01■■■□□ 2.24
HOXB7-201ENST00000239165 ZNF831Q5JPB2 1677 aa29.01■■■□□ 2.23
HOXB7-201ENST00000239165 ZNF790Q6PG37 636 aa29.01■■■□□ 2.23
HOXB7-201ENST00000239165 AMIGO3Q86WK7 504 aa29.01■■■□□ 2.23
HOXB7-201ENST00000239165 CFAP44Q96MT7 982 aa29.01■■■□□ 2.23
HOXB7-201ENST00000239165 SALL2Q9Y467 1007 aaPredicted RBP29.01■■■□□ 2.23
HOXB7-201ENST00000239165 ATP6V1AP38606 617 aa29■■■□□ 2.23
HOXB7-201ENST00000239165 IFT57Q9NWB7 429 aa29■■■□□ 2.23
HOXB7-201ENST00000239165 KDM3BQ7LBC6 1761 aa28.99■■■□□ 2.23
HOXB7-201ENST00000239165 UBR2Q8IWV8 1755 aa28.99■■■□□ 2.23
HOXB7-201ENST00000239165 KCPQ6ZWJ8 1503 aa28.99■■■□□ 2.23
HOXB7-201ENST00000239165 SLC39A6Q13433 755 aa28.98■■■□□ 2.23
HOXB7-201ENST00000239165 HNRNPUQ00839 825 aaKnown RBP eCLIP28.97■■■□□ 2.23
HOXB7-201ENST00000239165 SLC4A9Q96Q91 983 aa28.97■■■□□ 2.23
HOXB7-201ENST00000239165 GNAI1P63096 354 aa28.96■■■□□ 2.23
HOXB7-201ENST00000239165 SMIM5Q71RC9 77 aa28.95■■■□□ 2.22
HOXB7-201ENST00000239165 CICQ96RK0 1608 aaPredicted RBP28.94■■■□□ 2.22
HOXB7-201ENST00000239165 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.94■■■□□ 2.22
HOXB7-201ENST00000239165 KCNQ3O43525 872 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms