RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 CCDC117Q8IWD4 279 aaPredicted RBP11.93□□□□□ -0.5
SLF2-201ENST00000238961 PRC1O43663 620 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 GMNNO75496 209 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 ALS2CR12Q96Q35 445 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 KIF3CO14782 793 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 TDRD12Q587J7 1177 aaKnown RBP11.93□□□□□ -0.5
SLF2-201ENST00000238961 CCDC144CPQ8IYA2 1237 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 SIL1Q9H173 461 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 EHMT1Q9H9B1 1298 aa11.93□□□□□ -0.5
SLF2-201ENST00000238961 NEK4P51957 841 aa11.92□□□□□ -0.5
SLF2-201ENST00000238961 KIF5AQ12840 1032 aa11.92□□□□□ -0.5
SLF2-201ENST00000238961 MBD3O95983 291 aa11.92□□□□□ -0.5
SLF2-201ENST00000238961 PIP4K2BP78356 416 aa11.92□□□□□ -0.5
SLF2-201ENST00000238961 CETN1Q12798 172 aa11.92□□□□□ -0.5
SLF2-201ENST00000238961 HAUS7Q99871 368 aa11.92□□□□□ -0.5
SLF2-201ENST00000238961 CASQ1P31415 396 aa11.92□□□□□ -0.5
SLF2-201ENST00000238961 C16orf71Q8IYS4 520 aaPredicted RBP11.92□□□□□ -0.5
SLF2-201ENST00000238961 DDX54Q8TDD1 881 aaKnown RBP11.92□□□□□ -0.5
SLF2-201ENST00000238961 MRE11P49959 708 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 CFAP100Q494V2 611 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 ARHGAP35Q9NRY4 1499 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 PAFAH1B1P43034 410 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 UBXN4Q92575 508 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 CEP131Q9UPN4 1083 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 BICD1Q96G01 975 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 SMTNL1A8MU46 457 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
SLF2-201ENST00000238961 SEPT8Q92599 483 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 SIRT1Q96EB6 747 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
SLF2-201ENST00000238961 ERCC5P28715 1186 aaPredicted RBP11.91□□□□□ -0.5
SLF2-201ENST00000238961 FILIP1Q7Z7B0 1213 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 SAMM50Q9Y512 469 aa11.91□□□□□ -0.5
SLF2-201ENST00000238961 KLHL10Q6JEL2 608 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 CYP46A1Q9Y6A2 500 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 ATP2C2O75185 946 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 SYCP3Q8IZU3 236 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 ZNF287Q9HBT7 754 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 CUL4BQ13620 913 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 EPSTI1Q96J88 318 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 MKNK2Q9HBH9 465 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
SLF2-201ENST00000238961 FGFR1OPO95684 399 aaKnown RBP11.9□□□□□ -0.5
SLF2-201ENST00000238961 MCM3P25205 808 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 XPCQ01831 940 aaPredicted RBP11.9□□□□□ -0.5
SLF2-201ENST00000238961 ANKRD1Q15327 319 aa11.9□□□□□ -0.5
SLF2-201ENST00000238961 MPHOSPH6Q99547 160 aaKnown RBP11.9□□□□□ -0.5
SLF2-201ENST00000238961 CCDC14Q49A88 953 aa11.9□□□□□ -0.51
SLF2-201ENST00000238961 MAATS1Q7Z4T9 603 aa11.9□□□□□ -0.51
SLF2-201ENST00000238961 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.51
SLF2-201ENST00000238961 PTPRGP23470 1445 aa11.89□□□□□ -0.51
SLF2-201ENST00000238961 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
SLF2-201ENST00000238961 MAP4K4O95819 1239 aaPredicted RBP11.89□□□□□ -0.51
SLF2-201ENST00000238961 FAM114A1Q8IWE2 563 aa11.89□□□□□ -0.51
SLF2-201ENST00000238961 CACYBPQ9HB71 228 aaKnown RBP11.89□□□□□ -0.51
SLF2-201ENST00000238961 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
SLF2-201ENST00000238961 CABP4P57796 275 aa11.89□□□□□ -0.51
SLF2-201ENST00000238961 TCERG1LQ5VWI1 586 aa11.89□□□□□ -0.51
SLF2-201ENST00000238961 CCT6BQ92526 530 aa11.89□□□□□ -0.51
SLF2-201ENST00000238961 WASF1Q92558 559 aa11.89□□□□□ -0.51
SLF2-201ENST00000238961 PANK3Q9H999 370 aa11.89□□□□□ -0.51
SLF2-201ENST00000238961 USO1O60763 962 aaKnown RBP11.89□□□□□ -0.51
SLF2-201ENST00000238961 GNAI1P63096 354 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 KIF4BQ2VIQ3 1234 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 TMX1Q9H3N1 280 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 MMRN2Q9H8L6 949 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
SLF2-201ENST00000238961 ABCF2Q9UG63 623 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 NOC2LQ9Y3T9 749 aaKnown RBP11.88□□□□□ -0.51
SLF2-201ENST00000238961 GAPVD1Q14C86 1478 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 KIF4AO95239 1232 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 EXOC6Q8TAG9 804 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 SMC6Q96SB8 1091 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 NESP48681 1621 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 DACT3Q96B18 629 aaPredicted RBP11.88□□□□□ -0.51
SLF2-201ENST00000238961 AQRO60306 1485 aaKnown RBP eCLIP11.88□□□□□ -0.512e-6■■■■□ 25.1
SLF2-201ENST00000238961 CRCPO75575 148 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 ATP6V1E1P36543 226 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 SRRTQ9BXP5 876 aaKnown RBP11.88□□□□□ -0.51
SLF2-201ENST00000238961 FAM107BQ9H098 131 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 DPH6Q7L8W6 267 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
SLF2-201ENST00000238961 ERCC3P19447 782 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 RFC1P35251 1148 aaPredicted RBP11.87□□□□□ -0.51
SLF2-201ENST00000238961 KRT85P78386 507 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 GOLGA6L9A6NEM1 432 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 NAA15Q9BXJ9 866 aaKnown RBP11.87□□□□□ -0.51
SLF2-201ENST00000238961 ATP2B3Q16720 1220 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 LARP1BQ659C4 914 aaKnown RBP11.87□□□□□ -0.51
SLF2-201ENST00000238961 OPA1O60313 960 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 WHAMMQ8TF30 809 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 ANKFY1Q9P2R3 1169 aa11.87□□□□□ -0.51
SLF2-201ENST00000238961 IGHMBP2P38935 993 aaKnown RBP11.86□□□□□ -0.51
SLF2-201ENST00000238961 GEN1Q17RS7 908 aa11.86□□□□□ -0.51
SLF2-201ENST00000238961 CEP120Q8N960 986 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 908.6 ms