RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 USHBP1Q8N6Y0 703 aa15.66■□□□□ 0.1
NEK4-201ENST00000233027 LRP2BPQ9P2M1 347 aa15.66■□□□□ 0.1
NEK4-201ENST00000233027 CLIP2Q9UDT6 1046 aa15.66■□□□□ 0.1
NEK4-201ENST00000233027 SEPT7Q16181 437 aaKnown RBP15.66■□□□□ 0.1
NEK4-201ENST00000233027 NESP48681 1621 aa15.66■□□□□ 0.1
NEK4-201ENST00000233027 KLHL10Q6JEL2 608 aa15.66■□□□□ 0.1
NEK4-201ENST00000233027 AIDAQ96BJ3 306 aa15.66■□□□□ 0.1
NEK4-201ENST00000233027 IGHDP01880 384 aa15.65■□□□□ 0.1
NEK4-201ENST00000233027 WAPLQ7Z5K2 1190 aa15.65■□□□□ 0.1
NEK4-201ENST00000233027 NUDT16Q96DE0 195 aaKnown RBP15.65■□□□□ 0.1
NEK4-201ENST00000233027 LRPPRCP42704 1394 aaKnown RBP15.65■□□□□ 0.1
NEK4-201ENST00000233027 ALDH1L2Q3SY69 923 aa15.65■□□□□ 0.1
NEK4-201ENST00000233027 CCDC8Q9H0W5 538 aaPredicted RBP15.65■□□□□ 0.1
NEK4-201ENST00000233027 TRMT1Q9NXH9 659 aaKnown RBP15.65■□□□□ 0.1
NEK4-201ENST00000233027 RAB11FIP3O75154 756 aa15.65■□□□□ 0.1
NEK4-201ENST00000233027 CASQ1P31415 396 aa15.65■□□□□ 0.1
NEK4-201ENST00000233027 GLRX3O76003 335 aaKnown RBP15.65■□□□□ 0.1
NEK4-201ENST00000233027 MYD88Q99836 296 aa15.65■□□□□ 0.1
NEK4-201ENST00000233027 TRIM27P14373 513 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 SFPQP23246 707 aaKnown RBP eCLIP15.64■□□□□ 0.09
NEK4-201ENST00000233027 RBM5P52756 815 aaKnown RBP eCLIP15.64■□□□□ 0.09
NEK4-201ENST00000233027 TMCO3Q6UWJ1 677 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 TAF3Q5VWG9 929 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 PTPN23Q9H3S7 1636 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 NCAPD3P42695 1498 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 IQCEQ6IPM2 695 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 BICDL1Q6ZP65 573 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 USP5P45974 858 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 WASF1Q92558 559 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 RAPGEF3O95398 923 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 TXLNBQ8N3L3 684 aa15.64■□□□□ 0.09
NEK4-201ENST00000233027 TBC1D9Q6ZT07 1266 aa15.63■□□□□ 0.09
NEK4-201ENST00000233027 CCDC148Q8NFR7 591 aa15.63■□□□□ 0.09
NEK4-201ENST00000233027 ANO10Q9NW15 660 aa15.63■□□□□ 0.09
NEK4-201ENST00000233027 URI1O94763 535 aaPredicted RBP15.63■□□□□ 0.09
NEK4-201ENST00000233027 TSHZ3Q63HK5 1081 aa15.63■□□□□ 0.09
NEK4-201ENST00000233027 POLA1P09884 1462 aaPredicted RBP15.63■□□□□ 0.09
NEK4-201ENST00000233027 C16orf45Q96MC5 204 aaPredicted RBP15.63■□□□□ 0.09
NEK4-201ENST00000233027 METTL24Q5JXM2 366 aa15.63■□□□□ 0.09
NEK4-201ENST00000233027 SLC52A1Q9NWF4 448 aa15.63■□□□□ 0.09
NEK4-201ENST00000233027 NME9Q86XW9 330 aa15.62■□□□□ 0.09
NEK4-201ENST00000233027 ABCF2Q9UG63 623 aa15.62■□□□□ 0.09
NEK4-201ENST00000233027 CEP131Q9UPN4 1083 aa15.62■□□□□ 0.09
NEK4-201ENST00000233027 ZC3H6P61129 1189 aaKnown RBP15.62■□□□□ 0.09
NEK4-201ENST00000233027 CCDC82Q8N4S0 544 aa15.62■□□□□ 0.09
NEK4-201ENST00000233027 CCT2P78371 535 aaKnown RBP15.62■□□□□ 0.09
NEK4-201ENST00000233027 EMILIN1Q9Y6C2 1016 aa15.62■□□□□ 0.09
NEK4-201ENST00000233027 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
NEK4-201ENST00000233027 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
NEK4-201ENST00000233027 TNNT1P13805 278 aa15.61■□□□□ 0.09
NEK4-201ENST00000233027 TAF7Q15545 349 aaPredicted RBP15.61■□□□□ 0.09
NEK4-201ENST00000233027 GJB2P29033 226 aa15.61■□□□□ 0.09
NEK4-201ENST00000233027 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
NEK4-201ENST00000233027 SNAPC4Q5SXM2 1469 aa15.61■□□□□ 0.09
NEK4-201ENST00000233027 MINDY4BA8MYZ0 360 aa15.61■□□□□ 0.09
NEK4-201ENST00000233027 BMP2KQ9NSY1 1161 aaPredicted RBP15.61■□□□□ 0.09
NEK4-201ENST00000233027 ARHGEF11O15085 1522 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 NUTM2BA6NNL0 878 aaPredicted RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 NUTM2EB1AL46 878 aaPredicted RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 TOP1P11387 765 aaKnown RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 NUTM2AQ8IVF1 878 aaPredicted RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 C8orf76Q96K31 380 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 SCAND2PQ9GZW5 306 aaPredicted RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 KIF18AQ8NI77 898 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 CPLX3Q8WVH0 158 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 TAF4BQ92750 862 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 TFIP11Q9UBB9 837 aaKnown RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 POLR3GO15318 223 aaPredicted RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 PPFIA3O75145 1194 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 ADCY5O95622 1261 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 IFIT1P09914 478 aaKnown RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 SH2B1Q9NRF2 756 aaPredicted RBP15.6■□□□□ 0.09
NEK4-201ENST00000233027 LIMCH1Q9UPQ0 1083 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 CAMSAP2Q08AD1 1489 aa15.6■□□□□ 0.09
NEK4-201ENST00000233027 PLEKHH1Q9ULM0 1364 aa15.59■□□□□ 0.09
NEK4-201ENST00000233027 WWC2Q6AWC2 1192 aa15.59■□□□□ 0.09
NEK4-201ENST00000233027 ZNF397Q8NF99 534 aaPredicted RBP15.59■□□□□ 0.09
NEK4-201ENST00000233027 ZSCAN12O43309 604 aa15.59■□□□□ 0.09
NEK4-201ENST00000233027 ZNF76P36508 570 aa15.59■□□□□ 0.09
NEK4-201ENST00000233027 ZSCAN29Q8IWY8 852 aaPredicted RBP15.59■□□□□ 0.09
NEK4-201ENST00000233027 BIN1O00499 593 aa15.59■□□□□ 0.09
NEK4-201ENST00000233027 DNA2P51530 1060 aa15.59■□□□□ 0.09
NEK4-201ENST00000233027 THEMISQ8N1K5 641 aaPredicted RBP15.59■□□□□ 0.09
NEK4-201ENST00000233027 BAG4O95429 457 aaKnown RBP15.59■□□□□ 0.09
NEK4-201ENST00000233027 IGHMBP2P38935 993 aaKnown RBP15.59■□□□□ 0.09
NEK4-201ENST00000233027 GOLGA6L7A0A1B0GV03 622 aa15.58■□□□□ 0.09
NEK4-201ENST00000233027 KIF5CO60282 957 aa15.58■□□□□ 0.08
NEK4-201ENST00000233027 CRACR2AQ9BSW2 395 aa15.58■□□□□ 0.08
NEK4-201ENST00000233027 PTCD1O75127 700 aaKnown RBP15.58■□□□□ 0.08
NEK4-201ENST00000233027 KIF4BQ2VIQ3 1234 aa15.58■□□□□ 0.08
NEK4-201ENST00000233027 NCOA1Q15788 1441 aa15.58■□□□□ 0.08
NEK4-201ENST00000233027 ISM2Q6H9L7 571 aa15.58■□□□□ 0.08
NEK4-201ENST00000233027 FSIP1Q8NA03 581 aa15.58■□□□□ 0.08
NEK4-201ENST00000233027 TRERF1Q96PN7 1200 aa15.58■□□□□ 0.08
NEK4-201ENST00000233027 MATR3P43243 847 aaKnown RBP eCLIP15.57■□□□□ 0.08
NEK4-201ENST00000233027 SSR1P43307 286 aaKnown RBP15.57■□□□□ 0.08
NEK4-201ENST00000233027 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
NEK4-201ENST00000233027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.57■□□□□ 0.08
NEK4-201ENST00000233027 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
NEK4-201ENST00000233027 MPHOSPH10O00566 681 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms