RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 CNTROBQ8N137 903 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 NEXMIFQ5QGS0 1516 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 CCDC8Q9H0W5 538 aaPredicted RBP17.55■□□□□ 0.4
PTK7-201ENST00000230418 FOSBP53539 338 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 RABEP1Q15276 862 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 IP6K1Q92551 441 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 DBF4Q9UBU7 674 aaPredicted RBP17.55■□□□□ 0.4
PTK7-201ENST00000230418 IQGAP1P46940 1657 aa17.55■□□□□ 0.4
PTK7-201ENST00000230418 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
PTK7-201ENST00000230418 SETD1BQ9UPS6 1966 aaKnown RBP17.54■□□□□ 0.4
PTK7-201ENST00000230418 CWF19L2Q2TBE0 894 aaKnown RBP17.54■□□□□ 0.4
PTK7-201ENST00000230418 RUFY2Q8WXA3 655 aa17.54■□□□□ 0.4
PTK7-201ENST00000230418 LAMC1P11047 1609 aa17.54■□□□□ 0.4
PTK7-201ENST00000230418 NFATC2IPQ8NCF5 419 aa17.54■□□□□ 0.4
PTK7-201ENST00000230418 TTC22Q5TAA0 569 aa17.53■□□□□ 0.4
PTK7-201ENST00000230418 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
PTK7-201ENST00000230418 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
PTK7-201ENST00000230418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.53■□□□□ 0.4
PTK7-201ENST00000230418 ZKSCAN1P17029 563 aaPredicted RBP17.53■□□□□ 0.4
PTK7-201ENST00000230418 SIRT1Q96EB6 747 aa17.53■□□□□ 0.4
PTK7-201ENST00000230418 GTF2E1P29083 439 aaPredicted RBP17.52■□□□□ 0.4
PTK7-201ENST00000230418 MCM4P33991 863 aa17.52■□□□□ 0.4
PTK7-201ENST00000230418 DCTPP1Q9H773 170 aa17.52■□□□□ 0.4
PTK7-201ENST00000230418 PTPRMP28827 1452 aa17.52■□□□□ 0.4
PTK7-201ENST00000230418 PLEKHM2Q8IWE5 1019 aa17.52■□□□□ 0.4
PTK7-201ENST00000230418 NAP1L5Q96NT1 182 aaPredicted RBP17.52■□□□□ 0.4
PTK7-201ENST00000230418 C19orf44Q9H6X5 657 aa17.52■□□□□ 0.4
PTK7-201ENST00000230418 PA2G4Q9UQ80 394 aaKnown RBP17.52■□□□□ 0.4
PTK7-201ENST00000230418 RIMBP3CA6NJZ7 1639 aa17.52■□□□□ 0.4
PTK7-201ENST00000230418 RIMBP3BA6NNM3 1639 aa17.52■□□□□ 0.4
PTK7-201ENST00000230418 RIMBP3Q9UFD9 1639 aa17.52■□□□□ 0.4
PTK7-201ENST00000230418 PLEKHG1Q9ULL1 1385 aa17.52■□□□□ 0.39
PTK7-201ENST00000230418 VPS37CA5D8V6 355 aaPredicted RBP17.52■□□□□ 0.39
PTK7-201ENST00000230418 MROH1Q8NDA8 1641 aa17.51■□□□□ 0.39
PTK7-201ENST00000230418 MAP3K5Q99683 1374 aa17.51■□□□□ 0.39
PTK7-201ENST00000230418 ADGRB1O14514 1584 aa17.51■□□□□ 0.39
PTK7-201ENST00000230418 BOLA2Q9H3K6 86 aa17.51■□□□□ 0.39
PTK7-201ENST00000230418 FAM135BQ49AJ0 1406 aa17.51■□□□□ 0.39
PTK7-201ENST00000230418 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
PTK7-201ENST00000230418 ZBTB3Q9H5J0 574 aa17.5■□□□□ 0.39
PTK7-201ENST00000230418 VWDEQ8N2E2 1590 aa17.5■□□□□ 0.39
PTK7-201ENST00000230418 USP6P35125 1406 aa17.5■□□□□ 0.39
PTK7-201ENST00000230418 ATP7BP35670 1465 aa17.5■□□□□ 0.39
PTK7-201ENST00000230418 PDE1AP54750 535 aa17.5■□□□□ 0.39
PTK7-201ENST00000230418 TOMM22Q9NS69 142 aa17.5■□□□□ 0.39
PTK7-201ENST00000230418 USP19O94966 1318 aa17.49■□□□□ 0.39
PTK7-201ENST00000230418 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
PTK7-201ENST00000230418 PNMA6EA0A0J9YXQ4 647 aa17.49■□□□□ 0.39
PTK7-201ENST00000230418 CADPS2Q86UW7 1296 aa17.49■□□□□ 0.39
PTK7-201ENST00000230418 KIF1BPQ96EK5 621 aa17.49■□□□□ 0.39
PTK7-201ENST00000230418 CLTCQ00610 1675 aaKnown RBP17.49■□□□□ 0.39
PTK7-201ENST00000230418 PRPF40AO75400 957 aaKnown RBP17.49■□□□□ 0.39
PTK7-201ENST00000230418 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
PTK7-201ENST00000230418 AKAP4Q5JQC9 854 aa17.48■□□□□ 0.39
PTK7-201ENST00000230418 ADAMTS2O95450 1211 aa17.48■□□□□ 0.39
PTK7-201ENST00000230418 DNTTIP2Q5QJE6 756 aaKnown RBP17.48■□□□□ 0.39
PTK7-201ENST00000230418 COPS6Q7L5N1 327 aa17.48■□□□□ 0.39
PTK7-201ENST00000230418 PIP4K2BP78356 416 aa17.48■□□□□ 0.39
PTK7-201ENST00000230418 UBE3BQ7Z3V4 1068 aa17.48■□□□□ 0.39
PTK7-201ENST00000230418 NLRP1Q9C000 1473 aa17.48■□□□□ 0.39
PTK7-201ENST00000230418 SSFA2P28290 1259 aa17.47■□□□□ 0.39
PTK7-201ENST00000230418 XAGE3Q8WTP9 111 aa17.47■□□□□ 0.39
PTK7-201ENST00000230418 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
PTK7-201ENST00000230418 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
PTK7-201ENST00000230418 NUCB2P80303 420 aa17.47■□□□□ 0.39
PTK7-201ENST00000230418 NRXN1Q9ULB1 1477 aa17.47■□□□□ 0.39
PTK7-201ENST00000230418 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
PTK7-201ENST00000230418 ARHGEF40Q8TER5 1519 aa17.46■□□□□ 0.39
PTK7-201ENST00000230418 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
PTK7-201ENST00000230418 DTNBO60941 627 aa17.46■□□□□ 0.39
PTK7-201ENST00000230418 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.39
PTK7-201ENST00000230418 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
PTK7-201ENST00000230418 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.39
PTK7-201ENST00000230418 A0A087WZG4 1122 aa17.46■□□□□ 0.38
PTK7-201ENST00000230418 WASHC4Q2M389 1173 aa17.46■□□□□ 0.38
PTK7-201ENST00000230418 SIRT2Q8IXJ6 389 aa17.46■□□□□ 0.38
PTK7-201ENST00000230418 APPP05067 770 aa17.45■□□□□ 0.38
PTK7-201ENST00000230418 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
PTK7-201ENST00000230418 STK3Q13188 491 aa17.45■□□□□ 0.38
PTK7-201ENST00000230418 RNMTO43148 476 aaKnown RBP17.45■□□□□ 0.38
PTK7-201ENST00000230418 KDM4AO75164 1064 aa17.45■□□□□ 0.38
PTK7-201ENST00000230418 ZRSR1Q15695 479 aaKnown RBP17.45■□□□□ 0.38
PTK7-201ENST00000230418 ATP8B2P98198 1209 aa17.45■□□□□ 0.38
PTK7-201ENST00000230418 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
PTK7-201ENST00000230418 ABCC4O15439 1325 aa17.44■□□□□ 0.38
PTK7-201ENST00000230418 RNF214Q8ND24 703 aa17.44■□□□□ 0.38
PTK7-201ENST00000230418 TNPO1Q92973 898 aaKnown RBP17.44■□□□□ 0.38
PTK7-201ENST00000230418 KLHDC4Q8TBB5 520 aa17.43■□□□□ 0.38
PTK7-201ENST00000230418 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
PTK7-201ENST00000230418 HYPKQ9NX55 129 aa17.43■□□□□ 0.38
PTK7-201ENST00000230418 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
PTK7-201ENST00000230418 ERC1Q8IUD2 1116 aa17.42■□□□□ 0.38
PTK7-201ENST00000230418 JAKMIP1Q96N16 626 aaKnown RBP17.42■□□□□ 0.38
PTK7-201ENST00000230418 GPTP24298 496 aa17.42■□□□□ 0.38
PTK7-201ENST00000230418 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
PTK7-201ENST00000230418 FMNL2Q96PY5 1086 aa17.42■□□□□ 0.38
PTK7-201ENST00000230418 NPHP3Q7Z494 1330 aa17.42■□□□□ 0.38
PTK7-201ENST00000230418 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTK7-201ENST00000230418 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms