RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 RIC3Q7Z5B4 369 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 GPATCH11Q8N954 259 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 SH2B1Q9NRF2 756 aaPredicted RBP16.2■□□□□ 0.18
HCFC2-201ENST00000229330 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
HCFC2-201ENST00000229330 RPRD2Q5VT52 1461 aaKnown RBP16.2■□□□□ 0.18
HCFC2-201ENST00000229330 GOLGA6L7A0A1B0GV03 622 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 MX1P20591 662 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 TERF1P54274 439 aa16.2■□□□□ 0.18
HCFC2-201ENST00000229330 HDAC1Q13547 482 aaPredicted RBP16.19■□□□□ 0.18
HCFC2-201ENST00000229330 PCDHB15Q9Y5E8 787 aa16.19■□□□□ 0.18
HCFC2-201ENST00000229330 SNW1Q13573 536 aaKnown RBP16.19■□□□□ 0.18
HCFC2-201ENST00000229330 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
HCFC2-201ENST00000229330 CCDC171Q6TFL3 1326 aa16.19■□□□□ 0.18
HCFC2-201ENST00000229330 PROSER2Q86WR7 435 aaPredicted RBP16.19■□□□□ 0.18
HCFC2-201ENST00000229330 CTAGE5O15320 804 aa16.19■□□□□ 0.18
HCFC2-201ENST00000229330 IL1RAPL2Q9NP60 686 aa16.19■□□□□ 0.18
HCFC2-201ENST00000229330 TTC12Q9H892 705 aaPredicted RBP16.18■□□□□ 0.18
HCFC2-201ENST00000229330 LIMCH1Q9UPQ0 1083 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
HCFC2-201ENST00000229330 FCHSD2O94868 740 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 LMAN1P49257 510 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 KRT32Q14532 448 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 EXOC6BQ9Y2D4 811 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 KIF20AO95235 890 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 GAS2L2Q8NHY3 880 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 FEZ1Q99689 392 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 SEC24BO95487 1268 aa16.18■□□□□ 0.18
HCFC2-201ENST00000229330 SYTL4Q96C24 671 aaPredicted RBP16.18■□□□□ 0.18
HCFC2-201ENST00000229330 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
HCFC2-201ENST00000229330 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
HCFC2-201ENST00000229330 STX6O43752 255 aa16.17■□□□□ 0.18
HCFC2-201ENST00000229330 OGFRQ9NZT2 677 aa16.17■□□□□ 0.18
HCFC2-201ENST00000229330 NUCB1Q02818 461 aa16.17■□□□□ 0.18
HCFC2-201ENST00000229330 MAP9Q49MG5 647 aa16.17■□□□□ 0.18
HCFC2-201ENST00000229330 CCDC148Q8NFR7 591 aa16.17■□□□□ 0.18
HCFC2-201ENST00000229330 ABCC11Q96J66 1382 aa16.17■□□□□ 0.18
HCFC2-201ENST00000229330 GTF2A1P52655 376 aaPredicted RBP16.17■□□□□ 0.18
HCFC2-201ENST00000229330 NSD3Q9BZ95 1437 aa16.17■□□□□ 0.18
HCFC2-201ENST00000229330 ZNF165P49910 485 aa16.16■□□□□ 0.18
HCFC2-201ENST00000229330 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
HCFC2-201ENST00000229330 KIF5CO60282 957 aa16.16■□□□□ 0.18
HCFC2-201ENST00000229330 IGSF3O75054 1194 aa16.16■□□□□ 0.18
HCFC2-201ENST00000229330 GIMAP6Q6P9H5 292 aa16.16■□□□□ 0.18
HCFC2-201ENST00000229330 CAVIN2O95810 425 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 NFE2L2Q16236 605 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 DDX11Q96FC9 970 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 TRIM34Q9BYJ4 488 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 GPATCH8Q9UKJ3 1502 aaKnown RBP16.15■□□□□ 0.18
HCFC2-201ENST00000229330 TOP1P11387 765 aaKnown RBP16.15■□□□□ 0.18
HCFC2-201ENST00000229330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.15■□□□□ 0.18
HCFC2-201ENST00000229330 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 ERLIN2O94905 339 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 LRRFIP2Q9Y608 721 aaKnown RBP16.15■□□□□ 0.18
HCFC2-201ENST00000229330 POGZQ7Z3K3 1410 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 EPS15P42566 896 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
HCFC2-201ENST00000229330 MCM3P25205 808 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 TMX3Q96JJ7 454 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 SRGAP3O43295 1099 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 SART3Q15020 963 aaKnown RBP16.14■□□□□ 0.17
HCFC2-201ENST00000229330 ODF2Q5BJF6 829 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
HCFC2-201ENST00000229330 CCDC186Q7Z3E2 898 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 IRX3P78415 501 aaPredicted RBP16.14■□□□□ 0.17
HCFC2-201ENST00000229330 TTC22Q5TAA0 569 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 TXLNAP40222 546 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 STX1AQ16623 288 aa16.14■□□□□ 0.17
HCFC2-201ENST00000229330 ZNF397Q8NF99 534 aaPredicted RBP16.13■□□□□ 0.17
HCFC2-201ENST00000229330 HDGFL1Q5TGJ6 251 aa16.13■□□□□ 0.17
HCFC2-201ENST00000229330 FANCAO15360 1455 aa16.13■□□□□ 0.17
HCFC2-201ENST00000229330 TMC6Q7Z403 805 aa16.13■□□□□ 0.17
HCFC2-201ENST00000229330 USP48Q86UV5 1035 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 AACSQ86V21 672 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 ANKLE2Q86XL3 938 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 IPO4Q8TEX9 1081 aaKnown RBP16.12■□□□□ 0.17
HCFC2-201ENST00000229330 LUC7LQ9NQ29 371 aaKnown RBP16.12■□□□□ 0.17
HCFC2-201ENST00000229330 G3V3G9 751 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 GJB2P29033 226 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 DCAF8Q5TAQ9 597 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 RAPGEF6Q8TEU7 1601 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 RNF123Q5XPI4 1314 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 FAM200AQ8TCP9 573 aa16.12■□□□□ 0.17
HCFC2-201ENST00000229330 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
HCFC2-201ENST00000229330 HSP90AB2PQ58FF8 381 aa16.11■□□□□ 0.17
HCFC2-201ENST00000229330 ADGRF5Q8IZF2 1346 aa16.11■□□□□ 0.17
HCFC2-201ENST00000229330 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
HCFC2-201ENST00000229330 CCDC150Q8NCX0 1101 aa16.11■□□□□ 0.17
HCFC2-201ENST00000229330 IVLP07476 585 aa16.11■□□□□ 0.17
HCFC2-201ENST00000229330 PLEKHO1Q53GL0 409 aaPredicted RBP16.11■□□□□ 0.17
HCFC2-201ENST00000229330 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
HCFC2-201ENST00000229330 ZSCAN22P10073 491 aaPredicted RBP16.11■□□□□ 0.17
HCFC2-201ENST00000229330 GOLGA6L9A6NEM1 432 aa16.1■□□□□ 0.17
HCFC2-201ENST00000229330 SLU7O95391 586 aaKnown RBP16.1■□□□□ 0.17
HCFC2-201ENST00000229330 KIAA1328Q86T90 577 aa16.1■□□□□ 0.17
HCFC2-201ENST00000229330 RBSNQ9H1K0 784 aa16.1■□□□□ 0.17
HCFC2-201ENST00000229330 SKILP12757 684 aa16.1■□□□□ 0.17
HCFC2-201ENST00000229330 STIM1Q13586 685 aa16.1■□□□□ 0.17
HCFC2-201ENST00000229330 MICALCLQ6ZW33 695 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms