RNA–Protein interactions for RNA: ENST00000222305.7

USF2-201, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF2, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-201ENST00000222305 BRWD3Q6RI45 1802 aa29.87■■■□□ 2.37
USF2-201ENST00000222305 CHL1O00533 1208 aa29.87■■■□□ 2.37
USF2-201ENST00000222305 RBM6P78332 1123 aaKnown RBP29.87■■■□□ 2.37
USF2-201ENST00000222305 TAF7Q15545 349 aaPredicted RBP29.87■■■□□ 2.37
USF2-201ENST00000222305 TSPYL4Q9UJ04 414 aa29.85■■■□□ 2.37
USF2-201ENST00000222305 MARCH10Q8NA82 808 aaPredicted RBP29.85■■■□□ 2.37
USF2-201ENST00000222305 SLC52A2Q9HAB3 445 aa29.85■■■□□ 2.37
USF2-201ENST00000222305 ONECUT3O60422 494 aaPredicted RBP29.84■■■□□ 2.37
USF2-201ENST00000222305 SEPT12Q8IYM1 358 aa29.84■■■□□ 2.37
USF2-201ENST00000222305 RXRBP28702 533 aa29.83■■■□□ 2.37
USF2-201ENST00000222305 EXOSC9Q06265 439 aaKnown RBP29.83■■■□□ 2.37
USF2-201ENST00000222305 NFATC2IPQ8NCF5 419 aa29.82■■■□□ 2.36
USF2-201ENST00000222305 BTBD11A6QL63 1104 aa29.81■■■□□ 2.36
USF2-201ENST00000222305 CABP4P57796 275 aa29.81■■■□□ 2.36
USF2-201ENST00000222305 ERVV-2B6SEH9 535 aa29.8■■■□□ 2.36
USF2-201ENST00000222305 BABAM1Q9NWV8 329 aa29.78■■■□□ 2.36
USF2-201ENST00000222305 PAPPAQ13219 1627 aa29.78■■■□□ 2.36
USF2-201ENST00000222305 KCNQ3O43525 872 aa29.76■■■□□ 2.35
USF2-201ENST00000222305 KRT24Q2M2I5 525 aa29.76■■■□□ 2.35
USF2-201ENST00000222305 FAM182BQ5T319 152 aa29.75■■■□□ 2.35
USF2-201ENST00000222305 TSPYL6Q8N831 410 aa29.74■■■□□ 2.35
USF2-201ENST00000222305 C8orf58Q8NAV2 365 aa29.74■■■□□ 2.35
USF2-201ENST00000222305 RCAN3Q9UKA8 241 aa29.74■■■□□ 2.35
USF2-201ENST00000222305 SBF2Q86WG5 1849 aa29.74■■■□□ 2.35
USF2-201ENST00000222305 UBR2Q8IWV8 1755 aa29.74■■■□□ 2.35
USF2-201ENST00000222305 RGS12O14924 1447 aa29.74■■■□□ 2.35
USF2-201ENST00000222305 ELL2O00472 640 aaPredicted RBP29.74■■■□□ 2.35
USF2-201ENST00000222305 SLC39A6Q13433 755 aa29.74■■■□□ 2.35
USF2-201ENST00000222305 TMOD3Q9NYL9 352 aa29.73■■■□□ 2.35
USF2-201ENST00000222305 ACSBG1Q96GR2 724 aa29.72■■■□□ 2.35
USF2-201ENST00000222305 SYTL4Q96C24 671 aaPredicted RBP29.71■■■□□ 2.35
USF2-201ENST00000222305 PRIM1P49642 420 aaKnown RBP29.7■■■□□ 2.34
USF2-201ENST00000222305 TWISTNBQ3B726 338 aaPredicted RBP29.7■■■□□ 2.34
USF2-201ENST00000222305 ZNF790Q6PG37 636 aa29.7■■■□□ 2.34
USF2-201ENST00000222305 C5P01031 1676 aa29.7■■■□□ 2.34
USF2-201ENST00000222305 EIF4A1P60842 406 aaKnown RBP29.69■■■□□ 2.34
USF2-201ENST00000222305 PIGBQ92521 554 aa29.69■■■□□ 2.34
USF2-201ENST00000222305 BCL9O00512 1426 aa29.69■■■□□ 2.34
USF2-201ENST00000222305 SUPT16HQ9Y5B9 1047 aaKnown RBP29.68■■■□□ 2.34
USF2-201ENST00000222305 NHSQ6T4R5 1651 aa29.68■■■□□ 2.34
USF2-201ENST00000222305 CT47B1P0C2W7 299 aaPredicted RBP29.67■■■□□ 2.34
USF2-201ENST00000222305 KRT27Q7Z3Y8 459 aa29.67■■■□□ 2.34
USF2-201ENST00000222305 VAMP4O75379 141 aa29.67■■■□□ 2.34
USF2-201ENST00000222305 TTC5Q8N0Z6 440 aa29.66■■■□□ 2.34
USF2-201ENST00000222305 KCPQ6ZWJ8 1503 aa29.64■■■□□ 2.34
USF2-201ENST00000222305 BTAF1O14981 1849 aa29.64■■■□□ 2.34
USF2-201ENST00000222305 KCNQ2O43526 872 aa29.63■■■□□ 2.33
USF2-201ENST00000222305 RARSP54136 660 aaKnown RBP29.63■■■□□ 2.33
USF2-201ENST00000222305 EP400Q96L91 3159 aa29.63■■■□□ 2.33
USF2-201ENST00000222305 BCL2L13Q9BXK5 485 aa29.63■■■□□ 2.33
USF2-201ENST00000222305 BCAR3O75815 825 aa29.62■■■□□ 2.33
USF2-201ENST00000222305 ZNF496Q96IT1 587 aaPredicted RBP29.62■■■□□ 2.33
USF2-201ENST00000222305 ASAP1Q9ULH1 1129 aa29.62■■■□□ 2.33
USF2-201ENST00000222305 HEG1Q9ULI3 1381 aa29.62■■■□□ 2.33
USF2-201ENST00000222305 LAMB4A4D0S4 1761 aa29.61■■■□□ 2.33
USF2-201ENST00000222305 ATG3Q9NT62 314 aa29.6■■■□□ 2.33
USF2-201ENST00000222305 TCERG1O14776 1098 aaKnown RBP29.59■■■□□ 2.33
USF2-201ENST00000222305 SSH1Q8WYL5 1049 aa29.59■■■□□ 2.33
USF2-201ENST00000222305 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
USF2-201ENST00000222305 CACNA1FO60840 1977 aa29.58■■■□□ 2.33
USF2-201ENST00000222305 PRAMEF22A3QJZ6 481 aa29.58■■■□□ 2.33
USF2-201ENST00000222305 GIGYF1O75420 1035 aaPredicted RBP29.57■■■□□ 2.32
USF2-201ENST00000222305 PTF1AQ7RTS3 328 aa29.57■■■□□ 2.32
USF2-201ENST00000222305 PTCD1O75127 700 aaKnown RBP29.56■■■□□ 2.32
USF2-201ENST00000222305 ZNF428Q96B54 188 aa29.56■■■□□ 2.32
USF2-201ENST00000222305 SMC4Q9NTJ3 1288 aa29.56■■■□□ 2.32
USF2-201ENST00000222305 NECTIN2Q92692 538 aa29.56■■■□□ 2.32
USF2-201ENST00000222305 SOS1Q07889 1333 aaPredicted RBP29.55■■■□□ 2.32
USF2-201ENST00000222305 ALDH1L2Q3SY69 923 aa29.55■■■□□ 2.32
USF2-201ENST00000222305 HOXB7P09629 217 aa29.54■■■□□ 2.32
USF2-201ENST00000222305 RNF123Q5XPI4 1314 aa29.54■■■□□ 2.32
USF2-201ENST00000222305 RRP1P56182 461 aaKnown RBP29.53■■■□□ 2.32
USF2-201ENST00000222305 PLIN1O60240 522 aa29.53■■■□□ 2.32
USF2-201ENST00000222305 EIF2S2P20042 333 aaKnown RBP29.53■■■□□ 2.32
USF2-201ENST00000222305 HDGFL1Q5TGJ6 251 aa29.53■■■□□ 2.32
USF2-201ENST00000222305 FAM196AQ6ZSG2 479 aa29.53■■■□□ 2.32
USF2-201ENST00000222305 TJP1Q07157 1748 aa29.52■■■□□ 2.32
USF2-201ENST00000222305 RBM42Q9BTD8 480 aaKnown RBP29.52■■■□□ 2.32
USF2-201ENST00000222305 SNRPA1P09661 255 aaKnown RBP29.51■■■□□ 2.31
USF2-201ENST00000222305 CCDC30Q5VVM6 783 aa29.49■■■□□ 2.31
USF2-201ENST00000222305 MRPL50Q8N5N7 158 aaKnown RBP29.49■■■□□ 2.31
USF2-201ENST00000222305 FRAT1Q92837 279 aaPredicted RBP29.49■■■□□ 2.31
USF2-201ENST00000222305 PALLDQ8WX93 1383 aa29.48■■■□□ 2.31
USF2-201ENST00000222305 USP16Q9Y5T5 823 aa29.48■■■□□ 2.31
USF2-201ENST00000222305 LY75O60449 1722 aa29.47■■■□□ 2.31
USF2-201ENST00000222305 TRIM37O94972 964 aa29.46■■■□□ 2.31
USF2-201ENST00000222305 SLC4A9Q96Q91 983 aa29.46■■■□□ 2.31
USF2-201ENST00000222305 IRX6P78412 446 aaPredicted RBP29.45■■■□□ 2.31
USF2-201ENST00000222305 STK31Q9BXU1 1019 aa29.45■■■□□ 2.31
USF2-201ENST00000222305 SLC4A2P04920 1241 aa29.45■■■□□ 2.3
USF2-201ENST00000222305 CANXP27824 592 aaKnown RBP29.45■■■□□ 2.3
USF2-201ENST00000222305 SMARCC1Q92922 1105 aaPredicted RBP29.45■■■□□ 2.3
USF2-201ENST00000222305 BCL11BQ9C0K0 894 aaPredicted RBP29.45■■■□□ 2.3
USF2-201ENST00000222305 CHPF2Q9P2E5 772 aa29.45■■■□□ 2.3
USF2-201ENST00000222305 CICQ96RK0 1608 aaPredicted RBP29.45■■■□□ 2.3
USF2-201ENST00000222305 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.44■■■□□ 2.3
USF2-201ENST00000222305 NOB1Q9ULX3 412 aaKnown RBP29.44■■■□□ 2.3
USF2-201ENST00000222305 ZNF831Q5JPB2 1677 aa29.44■■■□□ 2.3
USF2-201ENST00000222305 KIF16BQ96L93 1317 aa29.44■■■□□ 2.3
USF2-201ENST00000222305 BRPF1P55201 1214 aaPredicted RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms