RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RRAGDQ9NQL2 400 aaPredicted RBP18■□□□□ 0.47
CNOT3-201ENST00000221232 RABEP1Q15276 862 aa18■□□□□ 0.47
CNOT3-201ENST00000221232 EIF5BO60841 1220 aaKnown RBP17.99■□□□□ 0.47
CNOT3-201ENST00000221232 MAP4K4O95819 1239 aaPredicted RBP17.99■□□□□ 0.47
CNOT3-201ENST00000221232 GAS2L3Q86XJ1 694 aa17.99■□□□□ 0.47
CNOT3-201ENST00000221232 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
CNOT3-201ENST00000221232 LGR6Q9HBX8 967 aa17.99■□□□□ 0.47
CNOT3-201ENST00000221232 TAF7Q15545 349 aaPredicted RBP17.98■□□□□ 0.47
CNOT3-201ENST00000221232 HDGFL1Q5TGJ6 251 aa17.98■□□□□ 0.47
CNOT3-201ENST00000221232 MCTP1Q6DN14 999 aa17.97■□□□□ 0.47
CNOT3-201ENST00000221232 ERC2O15083 957 aa17.97■□□□□ 0.47
CNOT3-201ENST00000221232 KCNQ3O43525 872 aa17.97■□□□□ 0.47
CNOT3-201ENST00000221232 LRRCC1Q9C099 1032 aa17.97■□□□□ 0.47
CNOT3-201ENST00000221232 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
CNOT3-201ENST00000221232 LRRC59Q96AG4 307 aaKnown RBP17.97■□□□□ 0.47
CNOT3-201ENST00000221232 GRPEL1Q9HAV7 217 aa17.97■□□□□ 0.47
CNOT3-201ENST00000221232 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
CNOT3-201ENST00000221232 ESCO1Q5FWF5 840 aa17.96■□□□□ 0.47
CNOT3-201ENST00000221232 FAM43AQ8N2R8 423 aa17.96■□□□□ 0.47
CNOT3-201ENST00000221232 KIF13AQ9H1H9 1805 aa17.96■□□□□ 0.47
CNOT3-201ENST00000221232 REC8O95072 547 aa17.95■□□□□ 0.46
CNOT3-201ENST00000221232 BAG4O95429 457 aaKnown RBP17.95■□□□□ 0.46
CNOT3-201ENST00000221232 NBPF6Q5VWK0 638 aa17.95■□□□□ 0.46
CNOT3-201ENST00000221232 NBPF4Q96M43 638 aa17.95■□□□□ 0.46
CNOT3-201ENST00000221232 DDX49Q9Y6V7 483 aaKnown RBP17.95■□□□□ 0.46
CNOT3-201ENST00000221232 NRKQ7Z2Y5 1582 aa17.95■□□□□ 0.46
CNOT3-201ENST00000221232 KDRP35968 1356 aa17.95■□□□□ 0.46
CNOT3-201ENST00000221232 NEK4P51957 841 aa17.95■□□□□ 0.46
CNOT3-201ENST00000221232 UNC5CLQ8IV45 518 aa17.95■□□□□ 0.46
CNOT3-201ENST00000221232 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
CNOT3-201ENST00000221232 GNAI3P08754 354 aa17.94■□□□□ 0.46
CNOT3-201ENST00000221232 ATP8B2P98198 1209 aa17.94■□□□□ 0.46
CNOT3-201ENST00000221232 PSME1Q06323 249 aa17.94■□□□□ 0.46
CNOT3-201ENST00000221232 ANO2Q9NQ90 1003 aa17.94■□□□□ 0.46
CNOT3-201ENST00000221232 UBTFL1P0CB47 393 aaPredicted RBP17.94■□□□□ 0.46
CNOT3-201ENST00000221232 MX1P20591 662 aa17.94■□□□□ 0.46
CNOT3-201ENST00000221232 PHF8Q9UPP1 1060 aa17.94■□□□□ 0.46
CNOT3-201ENST00000221232 ST18O60284 1047 aa17.93■□□□□ 0.46
CNOT3-201ENST00000221232 MRE11P49959 708 aa17.93■□□□□ 0.46
CNOT3-201ENST00000221232 MPRIPQ6WCQ1 1025 aa17.93■□□□□ 0.46
CNOT3-201ENST00000221232 RGPD8O14715 1765 aaPredicted RBP17.93■□□□□ 0.46
CNOT3-201ENST00000221232 SURF6O75683 361 aaKnown RBP17.93■□□□□ 0.46
CNOT3-201ENST00000221232 FOXD4L6Q3SYB3 417 aaPredicted RBP17.93■□□□□ 0.46
CNOT3-201ENST00000221232 FOXD4L3Q6VB84 417 aaPredicted RBP17.93■□□□□ 0.46
CNOT3-201ENST00000221232 GOLGA6L22H0YM25 854 aa17.92■□□□□ 0.46
CNOT3-201ENST00000221232 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
CNOT3-201ENST00000221232 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
CNOT3-201ENST00000221232 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
CNOT3-201ENST00000221232 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
CNOT3-201ENST00000221232 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
CNOT3-201ENST00000221232 HTATSF1O43719 755 aaKnown RBP17.9■□□□□ 0.46
CNOT3-201ENST00000221232 NBPF7P0C2Y1 421 aaPredicted RBP17.9■□□□□ 0.46
CNOT3-201ENST00000221232 PPP1R42Q7Z4L9 355 aa17.9■□□□□ 0.46
CNOT3-201ENST00000221232 ESYT1Q9BSJ8 1104 aa17.9■□□□□ 0.46
CNOT3-201ENST00000221232 UPF3BQ9BZI7 483 aaKnown RBP17.9■□□□□ 0.46
CNOT3-201ENST00000221232 AK9Q5TCS8 1911 aa17.9■□□□□ 0.46
CNOT3-201ENST00000221232 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.46
CNOT3-201ENST00000221232 TPRNQ4KMQ1 711 aa17.89■□□□□ 0.46
CNOT3-201ENST00000221232 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.46
CNOT3-201ENST00000221232 PRPF40AO75400 957 aaKnown RBP17.89■□□□□ 0.45
CNOT3-201ENST00000221232 SRGAP3O43295 1099 aa17.89■□□□□ 0.45
CNOT3-201ENST00000221232 IL25Q9H293 177 aa17.89■□□□□ 0.45
CNOT3-201ENST00000221232 OSBPL3Q9H4L5 887 aa17.89■□□□□ 0.45
CNOT3-201ENST00000221232 SKOR2Q2VWA4 1001 aaPredicted RBP17.88■□□□□ 0.45
CNOT3-201ENST00000221232 CAVIN1Q6NZI2 390 aaKnown RBP17.88■□□□□ 0.45
CNOT3-201ENST00000221232 LARP6Q9BRS8 491 aaKnown RBP17.88■□□□□ 0.45
CNOT3-201ENST00000221232 TOPAZ1Q8N9V7 1692 aa17.88■□□□□ 0.45
CNOT3-201ENST00000221232 DTNBO60941 627 aa17.88■□□□□ 0.45
CNOT3-201ENST00000221232 CHMLP26374 656 aa17.88■□□□□ 0.45
CNOT3-201ENST00000221232 TEFQ10587 303 aa17.88■□□□□ 0.45
CNOT3-201ENST00000221232 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
CNOT3-201ENST00000221232 RGPD1P0DJD0 1748 aa17.87■□□□□ 0.45
CNOT3-201ENST00000221232 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
CNOT3-201ENST00000221232 ORAI2Q96SN7 254 aa17.87■□□□□ 0.45
CNOT3-201ENST00000221232 PRAMEF22A3QJZ6 481 aa17.86■□□□□ 0.45
CNOT3-201ENST00000221232 BTBD11A6QL63 1104 aa17.86■□□□□ 0.45
CNOT3-201ENST00000221232 NUCB2P80303 420 aa17.86■□□□□ 0.45
CNOT3-201ENST00000221232 IP6K1Q92551 441 aa17.86■□□□□ 0.45
CNOT3-201ENST00000221232 TMX3Q96JJ7 454 aa17.86■□□□□ 0.45
CNOT3-201ENST00000221232 EIF4A1P60842 406 aaKnown RBP17.86■□□□□ 0.45
CNOT3-201ENST00000221232 RBM27Q9P2N5 1060 aaKnown RBP17.86■□□□□ 0.45
CNOT3-201ENST00000221232 ZDHHC9Q9Y397 364 aa17.86■□□□□ 0.45
CNOT3-201ENST00000221232 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-201ENST00000221232 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
CNOT3-201ENST00000221232 PIK3C2AO00443 1686 aa17.85■□□□□ 0.45
CNOT3-201ENST00000221232 SALL3Q9BXA9 1300 aa17.85■□□□□ 0.45
CNOT3-201ENST00000221232 SOS1Q07889 1333 aaPredicted RBP17.84■□□□□ 0.45
CNOT3-201ENST00000221232 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
CNOT3-201ENST00000221232 AIMP1Q12904 312 aaKnown RBP17.83■□□□□ 0.44
CNOT3-201ENST00000221232 ANKLE2Q86XL3 938 aa17.83■□□□□ 0.44
CNOT3-201ENST00000221232 RHPN1Q8TCX5 695 aa17.83■□□□□ 0.44
CNOT3-201ENST00000221232 LMBRD1Q9NUN5 540 aa17.83■□□□□ 0.44
CNOT3-201ENST00000221232 PROSER3Q2NL68 480 aa17.82■□□□□ 0.44
CNOT3-201ENST00000221232 DNAAF4Q8WXU2 420 aa17.82■□□□□ 0.44
CNOT3-201ENST00000221232 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
CNOT3-201ENST00000221232 MCCP23508 829 aa17.82■□□□□ 0.44
CNOT3-201ENST00000221232 PKNOX2Q96KN3 472 aa17.82■□□□□ 0.44
CNOT3-201ENST00000221232 KLHL40Q2TBA0 621 aa17.81■□□□□ 0.44
CNOT3-201ENST00000221232 SSH3Q8TE77 659 aa17.81■□□□□ 0.44
CNOT3-201ENST00000221232 TRIM44Q96DX7 344 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms