RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 UBXN4Q92575 508 aa17.3■□□□□ 0.36
UBR5-201ENST00000220959 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
UBR5-201ENST00000220959 CTNNA2P26232 953 aa17.3■□□□□ 0.36
UBR5-201ENST00000220959 ATF7IPQ6VMQ6 1270 aa17.3■□□□□ 0.36
UBR5-201ENST00000220959 IL1RAPL2Q9NP60 686 aa17.3■□□□□ 0.36
UBR5-201ENST00000220959 GCOM1H8Y6P7 765 aaPredicted RBP17.3■□□□□ 0.36
UBR5-201ENST00000220959 MYZAPP0CAP1 466 aa17.3■□□□□ 0.36
UBR5-201ENST00000220959 MAP9Q49MG5 647 aa17.3■□□□□ 0.36
UBR5-201ENST00000220959 CABP1Q9NZU7 370 aa17.3■□□□□ 0.36
UBR5-201ENST00000220959 MAP3K11Q16584 847 aa17.3■□□□□ 0.36
UBR5-201ENST00000220959 IFFO1Q0D2I5 559 aa17.29■□□□□ 0.36
UBR5-201ENST00000220959 TMEM266Q2M3C6 531 aa17.29■□□□□ 0.36
UBR5-201ENST00000220959 CASQ1P31415 396 aa17.29■□□□□ 0.36
UBR5-201ENST00000220959 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.29■□□□□ 0.36
UBR5-201ENST00000220959 CASTP20810 708 aaKnown RBP17.29■□□□□ 0.36
UBR5-201ENST00000220959 KLHL10Q6JEL2 608 aa17.29■□□□□ 0.36
UBR5-201ENST00000220959 BCCIPQ9P287 314 aaKnown RBP eCLIP17.29■□□□□ 0.36
UBR5-201ENST00000220959 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
UBR5-201ENST00000220959 ANKLE2Q86XL3 938 aa17.29■□□□□ 0.36
UBR5-201ENST00000220959 NAPBQ9H115 298 aa17.29■□□□□ 0.36
UBR5-201ENST00000220959 WDR63Q8IWG1 891 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 UQCRHLA0A096LP55 91 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 SHTN1A0MZ66 631 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 UQCRHP07919 91 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 MCM3P25205 808 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 TMCO3Q6UWJ1 677 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 GRPEL1Q9HAV7 217 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 ANKRD50Q9ULJ7 1429 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 KIF5CO60282 957 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
UBR5-201ENST00000220959 IQCA1Q86XH1 822 aa17.27■□□□□ 0.36
UBR5-201ENST00000220959 PSMD1Q99460 953 aa17.27■□□□□ 0.36
UBR5-201ENST00000220959 HOMER2Q9NSB8 354 aa17.27■□□□□ 0.36
UBR5-201ENST00000220959 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
UBR5-201ENST00000220959 CTCFLQ8NI51 663 aaPredicted RBP17.27■□□□□ 0.36
UBR5-201ENST00000220959 PABPN1LA6NDY0 278 aaKnown RBP17.27■□□□□ 0.35
UBR5-201ENST00000220959 ZNF644Q9H582 1327 aaPredicted RBP17.27■□□□□ 0.35
UBR5-201ENST00000220959 MACROD2A1Z1Q3 448 aa17.27■□□□□ 0.35
UBR5-201ENST00000220959 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.35
UBR5-201ENST00000220959 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
UBR5-201ENST00000220959 SLF2Q8IX21 1173 aa17.26■□□□□ 0.35
UBR5-201ENST00000220959 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
UBR5-201ENST00000220959 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
UBR5-201ENST00000220959 GIMAP7Q8NHV1 300 aa17.26■□□□□ 0.35
UBR5-201ENST00000220959 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.26■□□□□ 0.35
UBR5-201ENST00000220959 PAFAH1B1P43034 410 aa17.26■□□□□ 0.35
UBR5-201ENST00000220959 TAOK3Q9H2K8 898 aa17.26■□□□□ 0.35
UBR5-201ENST00000220959 ZSCAN12O43309 604 aa17.26■□□□□ 0.35
UBR5-201ENST00000220959 USO1O60763 962 aaKnown RBP17.26■□□□□ 0.35
UBR5-201ENST00000220959 MVPQ14764 893 aaKnown RBP17.26■□□□□ 0.35
UBR5-201ENST00000220959 KIF20AO95235 890 aa17.26■□□□□ 0.35
UBR5-201ENST00000220959 BAG4O95429 457 aaKnown RBP17.26■□□□□ 0.35
UBR5-201ENST00000220959 CETN1Q12798 172 aa17.25■□□□□ 0.35
UBR5-201ENST00000220959 FEZ1Q99689 392 aa17.25■□□□□ 0.35
UBR5-201ENST00000220959 LIG1P18858 919 aa17.25■□□□□ 0.35
UBR5-201ENST00000220959 KIF1BPQ96EK5 621 aa17.25■□□□□ 0.35
UBR5-201ENST00000220959 TMOD3Q9NYL9 352 aa17.25■□□□□ 0.35
UBR5-201ENST00000220959 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
UBR5-201ENST00000220959 ZC3H6P61129 1189 aaKnown RBP17.24■□□□□ 0.35
UBR5-201ENST00000220959 MAP3K12Q12852 859 aa17.24■□□□□ 0.35
UBR5-201ENST00000220959 KIF4BQ2VIQ3 1234 aa17.24■□□□□ 0.35
UBR5-201ENST00000220959 RPGRQ92834 1020 aaKnown RBP17.24■□□□□ 0.35
UBR5-201ENST00000220959 RANBP6O60518 1105 aaKnown RBP17.24■□□□□ 0.35
UBR5-201ENST00000220959 ANO10Q9NW15 660 aa17.24■□□□□ 0.35
UBR5-201ENST00000220959 FERMT1Q9BQL6 677 aa17.24■□□□□ 0.35
UBR5-201ENST00000220959 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
UBR5-201ENST00000220959 TDRD12Q587J7 1177 aaKnown RBP17.24■□□□□ 0.35
UBR5-201ENST00000220959 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
UBR5-201ENST00000220959 NLRP5P59047 1200 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 CAMK4Q16566 473 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 ERICH4A6NGS2 130 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 RAB11FIP3O75154 756 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
UBR5-201ENST00000220959 PTCD1O75127 700 aaKnown RBP17.23■□□□□ 0.35
UBR5-201ENST00000220959 PTPN14Q15678 1187 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 RRS1Q15050 365 aaKnown RBP17.23■□□□□ 0.35
UBR5-201ENST00000220959 ZNF213O14771 459 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 SPECC1Q5M775 1068 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 NUTM1Q86Y26 1132 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 SSX2IPQ9Y2D8 614 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 SMC1AQ14683 1233 aaKnown RBP17.23■□□□□ 0.35
UBR5-201ENST00000220959 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
UBR5-201ENST00000220959 SFPQP23246 707 aaKnown RBP eCLIP17.22■□□□□ 0.353e-6■■■□□ 15.2
UBR5-201ENST00000220959 KIF2AO00139 706 aaPredicted RBP17.22■□□□□ 0.35
UBR5-201ENST00000220959 TOP1P11387 765 aaKnown RBP17.22■□□□□ 0.35
UBR5-201ENST00000220959 SSRP1Q08945 709 aaKnown RBP17.22■□□□□ 0.35
UBR5-201ENST00000220959 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
UBR5-201ENST00000220959 PKNOX2Q96KN3 472 aa17.22■□□□□ 0.35
UBR5-201ENST00000220959 A0A087WZG4 1122 aa17.22■□□□□ 0.35
UBR5-201ENST00000220959 TNNT1P13805 278 aa17.22■□□□□ 0.35
UBR5-201ENST00000220959 DNA2P51530 1060 aa17.22■□□□□ 0.35
UBR5-201ENST00000220959 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
UBR5-201ENST00000220959 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
UBR5-201ENST00000220959 SLC5A1P13866 664 aa17.22■□□□□ 0.35
UBR5-201ENST00000220959 FERP16591 822 aa17.22■□□□□ 0.35
UBR5-201ENST00000220959 AFAP1Q8N556 730 aa17.21■□□□□ 0.35
UBR5-201ENST00000220959 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
UBR5-201ENST00000220959 SLC12A7Q9Y666 1083 aa17.21■□□□□ 0.35
UBR5-201ENST00000220959 TSNARE1Q96NA8 513 aa17.21■□□□□ 0.35
UBR5-201ENST00000220959 BOLA2Q9H3K6 86 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms