RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 NUP88Q99567 741 aaPredicted RBP19.96■□□□□ 0.79
ITGB4-201ENST00000200181 GIGYF2Q6Y7W6 1299 aaKnown RBP19.96■□□□□ 0.79
ITGB4-201ENST00000200181 STRN4Q9NRL3 753 aa19.96■□□□□ 0.79
ITGB4-201ENST00000200181 SPECC1Q5M775 1068 aa19.95■□□□□ 0.78
ITGB4-201ENST00000200181 TNIP1Q15025 636 aa19.95■□□□□ 0.78
ITGB4-201ENST00000200181 SCAND2PQ9GZW5 306 aaPredicted RBP19.95■□□□□ 0.78
ITGB4-201ENST00000200181 SEC63Q9UGP8 760 aaKnown RBP19.95■□□□□ 0.78
ITGB4-201ENST00000200181 YEATS4O95619 227 aa19.95■□□□□ 0.78
ITGB4-201ENST00000200181 FGFR1OPO95684 399 aaKnown RBP19.95■□□□□ 0.78
ITGB4-201ENST00000200181 IDH1O75874 414 aaKnown RBP19.95■□□□□ 0.78
ITGB4-201ENST00000200181 ZNF530Q6P9A1 599 aaPredicted RBP19.95■□□□□ 0.78
ITGB4-201ENST00000200181 SPINK5Q9NQ38 1064 aaPredicted RBP19.95■□□□□ 0.78
ITGB4-201ENST00000200181 NUTM1Q86Y26 1132 aa19.94■□□□□ 0.78
ITGB4-201ENST00000200181 RPAP2Q8IXW5 612 aaPredicted RBP19.94■□□□□ 0.78
ITGB4-201ENST00000200181 CTR9Q6PD62 1173 aa19.94■□□□□ 0.78
ITGB4-201ENST00000200181 TAOK3Q9H2K8 898 aa19.94■□□□□ 0.78
ITGB4-201ENST00000200181 PPP4R3BQ5MIZ7 849 aa19.94■□□□□ 0.78
ITGB4-201ENST00000200181 NAA15Q9BXJ9 866 aaKnown RBP19.94■□□□□ 0.78
ITGB4-201ENST00000200181 PHF23Q9BUL5 403 aaPredicted RBP19.93■□□□□ 0.78
ITGB4-201ENST00000200181 TRMT1Q9NXH9 659 aaKnown RBP19.93■□□□□ 0.78
ITGB4-201ENST00000200181 SPATA24Q86W54 205 aa19.93■□□□□ 0.78
ITGB4-201ENST00000200181 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.93■□□□□ 0.78
ITGB4-201ENST00000200181 UBA5Q9GZZ9 404 aa19.93■□□□□ 0.78
ITGB4-201ENST00000200181 PHAXQ9H814 394 aaKnown RBP19.93■□□□□ 0.78
ITGB4-201ENST00000200181 TDRD12Q587J7 1177 aaKnown RBP19.93■□□□□ 0.78
ITGB4-201ENST00000200181 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
ITGB4-201ENST00000200181 CUX1P39880 1505 aa19.93■□□□□ 0.78
ITGB4-201ENST00000200181 MACROD2A1Z1Q3 448 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 U3KPZ7 1027 aaPredicted RBP19.92■□□□□ 0.78
ITGB4-201ENST00000200181 NEMFO60524 1076 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 HLTFQ14527 1009 aaKnown RBP eCLIP19.92■□□□□ 0.78
ITGB4-201ENST00000200181 ALS2CR12Q96Q35 445 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 SPECC1LQ69YQ0 1117 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 DCAF8L1A6NGE4 600 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 SPDYE4A6NLX3 237 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 CTAGE5O15320 804 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 PRPF40BQ6NWY9 871 aaKnown RBP19.92■□□□□ 0.78
ITGB4-201ENST00000200181 ZFP91Q96JP5 570 aaPredicted RBP19.92■□□□□ 0.78
ITGB4-201ENST00000200181 FGD6Q6ZV73 1430 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 CPLX3Q8WVH0 158 aa19.92■□□□□ 0.78
ITGB4-201ENST00000200181 C16orf45Q96MC5 204 aaPredicted RBP19.92■□□□□ 0.78
ITGB4-201ENST00000200181 ANKRD18BA2A2Z9 1011 aa19.91■□□□□ 0.78
ITGB4-201ENST00000200181 CFAP70Q5T0N1 1121 aa19.91■□□□□ 0.78
ITGB4-201ENST00000200181 PPP1R1BQ9UD71 204 aaPredicted RBP19.91■□□□□ 0.78
ITGB4-201ENST00000200181 PPP4R3AQ6IN85 833 aa19.91■□□□□ 0.78
ITGB4-201ENST00000200181 CTNNA2P26232 953 aa19.9■□□□□ 0.78
ITGB4-201ENST00000200181 PLEKHH1Q9ULM0 1364 aa19.9■□□□□ 0.78
ITGB4-201ENST00000200181 GSDMDP57764 484 aa19.9■□□□□ 0.78
ITGB4-201ENST00000200181 DDX54Q8TDD1 881 aaKnown RBP19.9■□□□□ 0.78
ITGB4-201ENST00000200181 C8orf76Q96K31 380 aa19.9■□□□□ 0.78
ITGB4-201ENST00000200181 ANKRD50Q9ULJ7 1429 aa19.89■□□□□ 0.78
ITGB4-201ENST00000200181 IGHMBP2P38935 993 aaKnown RBP19.89■□□□□ 0.77
ITGB4-201ENST00000200181 C6orf163Q5TEZ5 329 aa19.89■□□□□ 0.77
ITGB4-201ENST00000200181 MAATS1Q7Z4T9 603 aa19.89■□□□□ 0.77
ITGB4-201ENST00000200181 ZNF287Q9HBT7 754 aa19.89■□□□□ 0.77
ITGB4-201ENST00000200181 SH2B1Q9NRF2 756 aaPredicted RBP19.89■□□□□ 0.77
ITGB4-201ENST00000200181 USP25Q9UHP3 1055 aa19.89■□□□□ 0.77
ITGB4-201ENST00000200181 PRAM1Q96QH2 718 aa19.89■□□□□ 0.77
ITGB4-201ENST00000200181 CCDC150Q8NCX0 1101 aa19.88■□□□□ 0.77
ITGB4-201ENST00000200181 SCLT1Q96NL6 688 aa19.88■□□□□ 0.77
ITGB4-201ENST00000200181 BTBD11A6QL63 1104 aa19.88■□□□□ 0.77
ITGB4-201ENST00000200181 LMAN1P49257 510 aa19.88■□□□□ 0.77
ITGB4-201ENST00000200181 CNNM3Q8NE01 707 aa19.88■□□□□ 0.77
ITGB4-201ENST00000200181 CCDC196A0A1B0GTZ2 297 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 TMCO5BA8MYB1 307 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 KIF20AO95235 890 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 MX1P20591 662 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 TMC6Q7Z403 805 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 RAB34Q9BZG1 259 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 TMEM266Q2M3C6 531 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 HOMER2Q9NSB8 354 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 FSD2A1L4K1 749 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 CKAP2LQ8IYA6 745 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 TOP2AP11388 1531 aaKnown RBP19.87■□□□□ 0.77
ITGB4-201ENST00000200181 TOM1L2Q6ZVM7 507 aa19.87■□□□□ 0.77
ITGB4-201ENST00000200181 KIF1BPQ96EK5 621 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 ZNF644Q9H582 1327 aaPredicted RBP19.86■□□□□ 0.77
ITGB4-201ENST00000200181 ABCF2Q9UG63 623 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 EXOC6BQ9Y2D4 811 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 GLRX3O76003 335 aaKnown RBP19.86■□□□□ 0.77
ITGB4-201ENST00000200181 TMEM57Q8N5G2 664 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 ANKRD30BQ9BXX2 1392 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 RAB11FIP3O75154 756 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 GUCY1B3Q02153 619 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 CEP112Q8N8E3 955 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 COMMD10Q9Y6G5 202 aa19.86■□□□□ 0.77
ITGB4-201ENST00000200181 GOLGA6L9A6NEM1 432 aa19.85■□□□□ 0.77
ITGB4-201ENST00000200181 SNW1Q13573 536 aaKnown RBP19.85■□□□□ 0.77
ITGB4-201ENST00000200181 MTIF2P46199 727 aaKnown RBP19.85■□□□□ 0.77
ITGB4-201ENST00000200181 DDX19AQ9NUU7 478 aaKnown RBP19.85■□□□□ 0.77
ITGB4-201ENST00000200181 MINDY4BA8MYZ0 360 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 BMS1Q14692 1282 aaKnown RBP19.84■□□□□ 0.77
ITGB4-201ENST00000200181 GRIPAP1Q4V328 841 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 FEZ1Q99689 392 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 POLR3DP05423 398 aaPredicted RBP19.84■□□□□ 0.77
ITGB4-201ENST00000200181 FERP16591 822 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 METTL24Q5JXM2 366 aa19.84■□□□□ 0.77
ITGB4-201ENST00000200181 CCDC85AQ96PX6 553 aaPredicted RBP19.84■□□□□ 0.77
ITGB4-201ENST00000200181 ZNF692Q9BU19 519 aaPredicted RBP19.84■□□□□ 0.77
ITGB4-201ENST00000200181 AKAP2Q9Y2D5 859 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms