RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 IL16Q14005 1332 aa27.32■■□□□ 1.96
TARBP1-201ENST00000040877 TEX14Q8IWB6 1497 aa27.32■■□□□ 1.96
TARBP1-201ENST00000040877 CADPS2Q86UW7 1296 aa27.31■■□□□ 1.96
TARBP1-201ENST00000040877 MYD88Q99836 296 aa27.31■■□□□ 1.96
TARBP1-201ENST00000040877 ZNHIT6Q9NWK9 470 aaKnown RBP27.31■■□□□ 1.96
TARBP1-201ENST00000040877 TMOD2Q9NZR1 351 aa27.31■■□□□ 1.96
TARBP1-201ENST00000040877 NUTM1Q86Y26 1132 aa27.31■■□□□ 1.96
TARBP1-201ENST00000040877 PPP1R1BQ9UD71 204 aaPredicted RBP27.31■■□□□ 1.96
TARBP1-201ENST00000040877 MYO6Q9UM54 1294 aa27.31■■□□□ 1.96
TARBP1-201ENST00000040877 HSP90B2PQ58FF3 399 aa27.31■■□□□ 1.96
TARBP1-201ENST00000040877 RAPGEF6Q8TEU7 1601 aa27.31■■□□□ 1.96
TARBP1-201ENST00000040877 KRT28Q7Z3Y7 464 aa27.3■■□□□ 1.96
TARBP1-201ENST00000040877 DUOX2Q9NRD8 1548 aa27.3■■□□□ 1.96
TARBP1-201ENST00000040877 BICDL1Q6ZP65 573 aa27.3■■□□□ 1.96
TARBP1-201ENST00000040877 LUC7LQ9NQ29 371 aaKnown RBP27.3■■□□□ 1.96
TARBP1-201ENST00000040877 IFIT5Q13325 482 aaKnown RBP27.3■■□□□ 1.96
TARBP1-201ENST00000040877 TMEM132AQ24JP5 1023 aa27.3■■□□□ 1.96
TARBP1-201ENST00000040877 CEBPAP49715 358 aaPredicted RBP27.29■■□□□ 1.96
TARBP1-201ENST00000040877 ERCC4Q92889 916 aaPredicted RBP27.29■■□□□ 1.96
TARBP1-201ENST00000040877 SPATA32Q96LK8 384 aa27.29■■□□□ 1.96
TARBP1-201ENST00000040877 IFNL2Q8IZJ0 200 aa27.28■■□□□ 1.96
TARBP1-201ENST00000040877 CAGE1Q8TC20 777 aa27.28■■□□□ 1.96
TARBP1-201ENST00000040877 BMP2KQ9NSY1 1161 aaPredicted RBP27.28■■□□□ 1.96
TARBP1-201ENST00000040877 SYCP1Q15431 976 aa27.28■■□□□ 1.96
TARBP1-201ENST00000040877 ZSCAN29Q8IWY8 852 aaPredicted RBP27.28■■□□□ 1.96
TARBP1-201ENST00000040877 TXLNBQ8N3L3 684 aa27.28■■□□□ 1.96
TARBP1-201ENST00000040877 USHBP1Q8N6Y0 703 aa27.28■■□□□ 1.96
TARBP1-201ENST00000040877 TTC21AQ8NDW8 1320 aa27.28■■□□□ 1.96
TARBP1-201ENST00000040877 MPRIPQ6WCQ1 1025 aa27.27■■□□□ 1.96
TARBP1-201ENST00000040877 NUP160Q12769 1436 aa27.27■■□□□ 1.96
TARBP1-201ENST00000040877 PKNOX2Q96KN3 472 aa27.27■■□□□ 1.96
TARBP1-201ENST00000040877 EXOC5O00471 708 aa27.27■■□□□ 1.96
TARBP1-201ENST00000040877 MAP7D2Q96T17 732 aa27.27■■□□□ 1.96
TARBP1-201ENST00000040877 ABCF2Q9UG63 623 aa27.27■■□□□ 1.96
TARBP1-201ENST00000040877 SERPINC1P01008 464 aa27.26■■□□□ 1.96
TARBP1-201ENST00000040877 ZFYVE27Q5T4F4 411 aa27.26■■□□□ 1.95
TARBP1-201ENST00000040877 CBFA2T2O43439 604 aa27.25■■□□□ 1.95
TARBP1-201ENST00000040877 HMGB1P09429 215 aaKnown RBP27.25■■□□□ 1.95
TARBP1-201ENST00000040877 CCDC85AQ96PX6 553 aaPredicted RBP27.25■■□□□ 1.95
TARBP1-201ENST00000040877 CEP131Q9UPN4 1083 aa27.25■■□□□ 1.95
TARBP1-201ENST00000040877 CASTP20810 708 aaKnown RBP27.25■■□□□ 1.95
TARBP1-201ENST00000040877 FLIIQ13045 1269 aa27.25■■□□□ 1.95
TARBP1-201ENST00000040877 ITSN2Q9NZM3 1697 aa27.25■■□□□ 1.95
TARBP1-201ENST00000040877 STK11IPQ8N1F8 1099 aa27.25■■□□□ 1.95
TARBP1-201ENST00000040877 ACEP12821 1306 aa27.25■■□□□ 1.95
TARBP1-201ENST00000040877 MAP3K12Q12852 859 aa27.24■■□□□ 1.95
TARBP1-201ENST00000040877 HSP90AB2PQ58FF8 381 aa27.24■■□□□ 1.95
TARBP1-201ENST00000040877 CCDC196A0A1B0GTZ2 297 aa27.24■■□□□ 1.95
TARBP1-201ENST00000040877 RALGAPBQ86X10 1494 aa27.24■■□□□ 1.95
TARBP1-201ENST00000040877 MTERF4Q7Z6M4 381 aaKnown RBP27.23■■□□□ 1.95
TARBP1-201ENST00000040877 PPFIBP1Q86W92 1011 aa27.23■■□□□ 1.95
TARBP1-201ENST00000040877 ATP10BO94823 1461 aa27.23■■□□□ 1.95
TARBP1-201ENST00000040877 SLC5A1P13866 664 aa27.23■■□□□ 1.95
TARBP1-201ENST00000040877 SH2B1Q9NRF2 756 aaPredicted RBP27.23■■□□□ 1.95
TARBP1-201ENST00000040877 HMGN5P82970 282 aaKnown RBP27.23■■□□□ 1.95
TARBP1-201ENST00000040877 CEP57L1Q8IYX8 460 aa27.23■■□□□ 1.95
TARBP1-201ENST00000040877 TRMT112Q9UI30 125 aaKnown RBP27.22■■□□□ 1.95
TARBP1-201ENST00000040877 UHRF1BP1LA0JNW5 1464 aa27.22■■□□□ 1.95
TARBP1-201ENST00000040877 A2MP01023 1474 aa27.22■■□□□ 1.95
TARBP1-201ENST00000040877 ANKRD18BA2A2Z9 1011 aa27.22■■□□□ 1.95
TARBP1-201ENST00000040877 ZNF518AQ6AHZ1 1483 aa27.21■■□□□ 1.95
TARBP1-201ENST00000040877 BRPF1P55201 1214 aaPredicted RBP27.21■■□□□ 1.95
TARBP1-201ENST00000040877 UGGT2Q9NYU1 1516 aa27.21■■□□□ 1.95
TARBP1-201ENST00000040877 PIK3R4Q99570 1358 aa27.21■■□□□ 1.95
TARBP1-201ENST00000040877 PLEKHH1Q9ULM0 1364 aa27.21■■□□□ 1.95
TARBP1-201ENST00000040877 DISP3Q9P2K9 1392 aa27.21■■□□□ 1.95
TARBP1-201ENST00000040877 NUP62CLQ9H1M0 184 aa27.2■■□□□ 1.95
TARBP1-201ENST00000040877 ASXL2Q76L83 1435 aa27.2■■□□□ 1.94
TARBP1-201ENST00000040877 LRRFIP2Q9Y608 721 aaKnown RBP27.2■■□□□ 1.94
TARBP1-201ENST00000040877 A0A087WZG4 1122 aa27.19■■□□□ 1.94
TARBP1-201ENST00000040877 NAPBQ9H115 298 aa27.19■■□□□ 1.94
TARBP1-201ENST00000040877 BOLA2Q9H3K6 86 aa27.19■■□□□ 1.94
TARBP1-201ENST00000040877 SLF2Q8IX21 1173 aa27.19■■□□□ 1.94
TARBP1-201ENST00000040877 TRIM27P14373 513 aa27.18■■□□□ 1.94
TARBP1-201ENST00000040877 USP5P45974 858 aa27.18■■□□□ 1.94
TARBP1-201ENST00000040877 PUS7Q96PZ0 661 aaKnown RBP27.18■■□□□ 1.94
TARBP1-201ENST00000040877 RNF41Q9H4P4 317 aaPredicted RBP27.18■■□□□ 1.94
TARBP1-201ENST00000040877 F6X3S4 739 aa27.17■■□□□ 1.94
TARBP1-201ENST00000040877 PRPF40BQ6NWY9 871 aaKnown RBP27.17■■□□□ 1.94
TARBP1-201ENST00000040877 MCM4P33991 863 aa27.17■■□□□ 1.94
TARBP1-201ENST00000040877 ADAMTS2O95450 1211 aa27.16■■□□□ 1.94
TARBP1-201ENST00000040877 ZHX3Q9H4I2 956 aa27.16■■□□□ 1.94
TARBP1-201ENST00000040877 NGLY1Q96IV0 654 aa27.16■■□□□ 1.94
TARBP1-201ENST00000040877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.16■■□□□ 1.943e-7■■■■■ 149.7
TARBP1-201ENST00000040877 ANKRD24Q8TF21 1146 aa27.15■■□□□ 1.94
TARBP1-201ENST00000040877 ARHGAP45Q92619 1136 aa27.15■■□□□ 1.94
TARBP1-201ENST00000040877 SMTNL1A8MU46 457 aa27.15■■□□□ 1.94
TARBP1-201ENST00000040877 SPINK5Q9NQ38 1064 aaPredicted RBP27.15■■□□□ 1.94
TARBP1-201ENST00000040877 SMARCA5O60264 1052 aaPredicted RBP27.15■■□□□ 1.94
TARBP1-201ENST00000040877 DZIP1Q86YF9 867 aaKnown RBP27.15■■□□□ 1.94
TARBP1-201ENST00000040877 POLR3DP05423 398 aaPredicted RBP27.15■■□□□ 1.94
TARBP1-201ENST00000040877 MSH6P52701 1360 aa27.15■■□□□ 1.94
TARBP1-201ENST00000040877 TTLL5Q6EMB2 1281 aa27.14■■□□□ 1.94
TARBP1-201ENST00000040877 EVI5LQ96CN4 794 aa27.14■■□□□ 1.94
TARBP1-201ENST00000040877 ECHDC1Q9NTX5 307 aa27.14■■□□□ 1.94
TARBP1-201ENST00000040877 SNRPA1P09661 255 aaKnown RBP27.14■■□□□ 1.94
TARBP1-201ENST00000040877 PRKCSHP14314 528 aaPredicted RBP27.14■■□□□ 1.94
TARBP1-201ENST00000040877 MKNK2Q9HBH9 465 aa27.14■■□□□ 1.93
TARBP1-201ENST00000040877 ANKIB1Q9P2G1 1089 aa27.14■■□□□ 1.93
TARBP1-201ENST00000040877 SEC63Q9UGP8 760 aaKnown RBP27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms