RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 Rab3gap2Q8BMG7 1366 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Aimp1P31230 310 aaKnown RBP13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Dusp27Q148W8 1138 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Cnnm1Q0GA42 951 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Skap1Q3UUV5 355 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Ctnnbl1Q9CWL8 563 aaKnown RBP13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Mtus1Q5HZI1 1210 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Bms1Q6PGF5 1284 aaKnown RBP13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Hook2Q7TMK6 716 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Ripply1Q2WG77 201 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Fez2Q6TYB5 348 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Mctp1E9PV86 951 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Paxbp1P58501 919 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 4933428M09RikQ9D3X3 192 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Rad54l2Q99NG0 1466 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 ZfxP17012 799 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Dzip1lQ499E4 774 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Kdm3aQ6PCM1 1323 aa13.34□□□□□ -0.27
Cux1-204ENSMUST00000175975 Ctr9Q62018 1173 aaKnown RBP13.33□□□□□ -0.27
Cux1-204ENSMUST00000175975 Zrsr1Q64707 428 aa13.33□□□□□ -0.27
Cux1-204ENSMUST00000175975 Soga1E1U8D0 1418 aa13.33□□□□□ -0.27
Cux1-204ENSMUST00000175975 Ell2Q3UKU1 639 aa13.33□□□□□ -0.27
Cux1-204ENSMUST00000175975 Txndc16Q7TN22 820 aa13.33□□□□□ -0.27
Cux1-204ENSMUST00000175975 TchpQ3TVW5 497 aa13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Gtf3c5Q8R2T8 520 aa13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Gigyf1Q99MR1 1044 aaKnown RBP13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Fam114a1Q9D281 569 aa13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Api5O35841 504 aaKnown RBP13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Sos1Q62245 1319 aa13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Rad23bP54728 416 aa13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Cct4P80315 539 aaKnown RBP13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Mum1Q6DID5 682 aa13.33□□□□□ -0.28
Cux1-204ENSMUST00000175975 Dact3Q0PHV7 610 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Pdcl2Q78Y63 240 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Hspa4Q61316 841 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Fam13aQ8BGI4 693 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Znf394Q9Z1D9 521 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Slc7a3P70423 618 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Zranb3Q6NZP1 1069 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Samm50Q8BGH2 469 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 MycnP03966 462 aaKnown RBP13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Trim25Q61510 634 aaKnown RBP13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Tmod2Q9JKK7 351 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 4930572O03RikQ8C5Y0 211 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Nsrp1Q5NCR9 542 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ccdc73Q8CDM4 1066 aa13.32□□□□□ -0.28
Cux1-204ENSMUST00000175975 IqceQ6PCQ0 778 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Atp2a2O55143 1044 aaKnown RBP13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ccdc93Q7TQK5 629 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Znf526Q8BI66 675 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Map3k9Q3U1V8 1077 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Tubb4aQ9D6F9 444 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Cep55Q8BT07 462 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ankrd35E9Q9D8 996 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Sclt1G5E861 688 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Nlrp3Q8R4B8 1033 aa13.31□□□□□ -0.28
Cux1-204ENSMUST00000175975 Smarca4Q3TKT4 1613 aaKnown RBP13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Kif5cP28738 956 aaKnown RBP13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Igf2bp2Q5SF07 592 aaKnown RBP13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Homer2Q9QWW1 354 aa13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Svs3aF2Z472 265 aa13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Zmym3Q9JLM4 1370 aa13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ktn1Q61595 1327 aaKnown RBP13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Psmd1Q3TXS7 953 aa13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Cage1Q5IR70 849 aa13.3□□□□□ -0.28
Cux1-204ENSMUST00000175975 Fam204aQ8C6C7 236 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Tubb5P99024 444 aaKnown RBP13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Lman1Q9D0F3 517 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Shroom4Q1W617 1475 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Specc1lQ2KN98 1118 aaKnown RBP13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Nol8Q3UHX0 1147 aaKnown RBP13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ddx19aQ61655 478 aaKnown RBP13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Prdm16A2A935 1275 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Uri1Q3TLD5 531 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Fchsd2Q3USJ8 740 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Sin3aQ60520 1274 aaKnown RBP13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Olfml1Q8BSH2 233 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Tbc1d2bQ3U0J8 965 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 AidaQ8C4Q6 305 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 ScribQ80U72 1612 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Cc2d2bA0A286YDU8 1405 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Rassf4Q8CB96 322 aa13.29□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ampd3O08739 766 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Crybg2B7ZCC2 1516 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ecm2Q5FW85 670 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Cc2d2aQ8CFW7 1633 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Specc1Q5SXY1 1067 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Pms1Q8K119 917 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Nup133Q8R0G9 1155 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ccdc124Q9D8X2 217 aaKnown RBP13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Spty2d1Q68FG3 682 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Srgap3Q812A2 1099 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Tmem87aQ8BXN9 555 aa13.28□□□□□ -0.28
Cux1-204ENSMUST00000175975 Cep63Q3UPP8 700 aa13.27□□□□□ -0.28
Cux1-204ENSMUST00000175975 Nol12Q8BG17 217 aa13.27□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ttc21bQ0HA38 1315 aa13.27□□□□□ -0.28
Cux1-204ENSMUST00000175975 Cdca8Q8BHX3 289 aa13.27□□□□□ -0.28
Cux1-204ENSMUST00000175975 Pabpn1Q8CCS6 302 aaKnown RBP13.27□□□□□ -0.28
Cux1-204ENSMUST00000175975 Ankrd49Q8VE42 238 aa13.27□□□□□ -0.28
Cux1-204ENSMUST00000175975 Irgm2A0A140LIF8 407 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms