RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Erlin2Q8BFZ9 340 aa20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Nkx1-2P42580 305 aa20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Ddx58Q6Q899 926 aa20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Ppm1eQ80TL0 749 aa20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Tmc2Q8R4P4 888 aa20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Polr3dQ91WD1 398 aa20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Bcl11bQ99PV8 884 aa20.22■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Lmbr1Q9JIT0 490 aa20.21■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Nucb2P81117 420 aa20.21■□□□□ 0.83
Ebf3-204ENSMUST00000169486 Zhx1P70121 873 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Igbp1bQ9QZ29 343 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 CebpzP53569 1052 aaKnown RBP20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Adck5Q80V03 582 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gm21698A0A087WQP8 267 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gm10093D3YYI8 482 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gm21671G3UY31 267 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Hdac1O09106 482 aaKnown RBP20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Cct2P80314 535 aaKnown RBP20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Jakmip3Q5DTN8 844 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 TkfcQ8VC30 578 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Rfx7F8VPJ6 1459 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Limch1Q3UH68 1057 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Rbm5Q91YE7 815 aaKnown RBP20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Speer4bQ9D9F7 267 aa20.2■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Zmym4A2A791 1549 aaKnown RBP20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Mlh3A0A1Y7VMP7 1443 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gm21663A0A0G2JE01 267 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 5031410I06RikE9Q4E0 267 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gm1979E9QAN3 267 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gm5862K7N5V5 267 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gm10220K7N660 267 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 FanclQ9CR14 375 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Chd1lQ9CXF7 900 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Ppfia3P60469 1194 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Mcm10Q0VBD2 885 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 LlphQ9D945 130 aaKnown RBP20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Il1rapl2Q9ERS6 686 aa20.19■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gimap6Q8K349 305 aa20.18■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Pde1cQ64338 706 aa20.18■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Ltv1Q6NSQ7 470 aaKnown RBP20.18■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Bag3Q9JLV1 577 aaKnown RBP20.18■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Fkbp5Q64378 456 aa20.18■□□□□ 0.82
Ebf3-204ENSMUST00000169486 ScaperF8VQ70 1398 aaKnown RBP20.18■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Tmem67Q8BR76 992 aa20.18■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Pik3c2gO70167 1506 aa20.18■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Exoc8Q6PGF7 716 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 TxlnbQ8VBT1 685 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Snw1Q9CSN1 536 aaKnown RBP20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Usp25P57080 1055 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gbp4Q61107 620 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Snx13Q6PHS6 957 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Cep55Q8BT07 462 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Trim11Q99PQ2 467 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Caskin1Q6P9K8 1431 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Cfap73J3QPZ5 306 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Cep135Q6P5D4 1140 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Wasf1Q8R5H6 559 aa20.17■□□□□ 0.82
Ebf3-204ENSMUST00000169486 GpkowQ56A08 488 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Vps18Q8R307 973 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Gm21680A0A0G2JGR8 267 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Stx1aO35526 288 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Trim34bJ3QNR8 485 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Tnni2P13412 182 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Tspyl3Q3UYP3 334 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Hspa4Q61316 841 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Smc1bQ920F6 1248 aa20.16■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Trim27Q62158 513 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Zbtb21E9Q444 1094 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Evi5lH3BKQ3 813 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Ccdc93Q7TQK5 629 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Ercc6lQ8BHK9 1240 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Ccdc158Q8CDI6 1109 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Znf131Q8K3J5 619 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Chrna2Q91X60 512 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Pik3r4Q8VD65 1358 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Arglu1Q3UL36 271 aaKnown RBP20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 EappQ5BU09 281 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Ppm1fQ8CGA0 452 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Ankib1Q6ZPS6 1085 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Bloc1s4Q8VED2 215 aa20.15■□□□□ 0.82
Ebf3-204ENSMUST00000169486 Flad1Q8R123 492 aa20.14■□□□□ 0.82
Ebf3-204ENSMUST00000169486 RalgapbQ8BQZ4 1484 aa20.14■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Abcf1Q6P542 837 aaKnown RBP20.14■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Dydc1Q9D9T0 175 aa20.14■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Znf653Q6YND2 615 aa20.14■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Brd1E9PZ26 1189 aaKnown RBP20.13■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Pip4k2bQ80XI4 416 aa20.13■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Tceanc2Q8R2M0 207 aa20.13■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Klhdc4Q921I2 584 aa20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Ssr1Q9CY50 286 aaKnown RBP20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Il4rP16382 810 aa20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Jade2Q6ZQF7 829 aa20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Ccdc150Q8CDI7 1110 aa20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Gadd45bP22339 160 aa20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Pdia3P27773 505 aaKnown RBP20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Kcnj4P52189 445 aa20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Atf7Q8R0S1 413 aa20.12■□□□□ 0.81
Ebf3-204ENSMUST00000169486 3425401B19RikD3Z1D3 1412 aa20.11■□□□□ 0.81
Ebf3-204ENSMUST00000169486 LyarQ08288 388 aaKnown RBP20.11■□□□□ 0.81
Ebf3-204ENSMUST00000169486 Tbc1d7Q9D0K0 293 aa20.11■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 6.8 ms