RNA–Protein interactions for RNA: ENSMUST00000166518.7

Ssr4-208, Transcript of Translocon-associated protein subunit delta, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssr4, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr4-208ENSMUST00000166518 Tcerg1Q8CGF7 1100 aaKnown RBP17.34■□□□□ 0.37
Ssr4-208ENSMUST00000166518 Ubr3Q5U430 1889 aa17.33■□□□□ 0.37
Ssr4-208ENSMUST00000166518 C4bP01029 1738 aa17.33■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Magea6O89010 325 aa17.32■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Lrrc43Q3V0L5 667 aa17.32■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Q4VA45 678 aa17.32■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Magea3Q6T340 320 aa17.32■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Q7TT23 1179 aa17.32■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Nav1Q8CH77 1875 aa17.31■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Prom2Q3UUY6 835 aa17.31■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Rpgrip1lQ8CG73 1264 aa17.31■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Zswim8Q3UHH1 1832 aaKnown RBP17.31■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Plch1Q4KWH5 1682 aa17.3■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Btbd11Q6GQW0 1109 aa17.3■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Znrd1-asQ8R0E5 213 aa17.3■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Col11a2Q64739 1736 aa17.3■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Atf7ipQ7TT18 1306 aa17.29■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Rad23bP54728 416 aa17.28■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Mrps5Q99N87 432 aaKnown RBP17.28■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Myo5bP21271 1818 aa17.28■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Apaf1O88879 1249 aa17.27■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Mylk2Q8VCR8 613 aa17.27■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Usp21Q9QZL6 566 aa17.27■□□□□ 0.36
Ssr4-208ENSMUST00000166518 Usp19Q3UJD6 1360 aa17.27■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Lrp5Q91VN0 1614 aa17.26■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Cers3Q1A3B0 383 aa17.26■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Rnf180Q3U827 592 aa17.26■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Zcwpw1Q6IR42 630 aa17.26■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Amhr2Q8K592 568 aa17.26■□□□□ 0.35
Ssr4-208ENSMUST00000166518 HmcesQ8R1M0 353 aaKnown RBP17.26■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Znf541Q0GGX2 1363 aa17.26■□□□□ 0.35
Ssr4-208ENSMUST00000166518 ScaperF8VQ70 1398 aaKnown RBP17.25■□□□□ 0.35
Ssr4-208ENSMUST00000166518 MetP16056 1379 aa17.25■□□□□ 0.35
Ssr4-208ENSMUST00000166518 PigbQ9JJQ0 542 aa17.24■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Cavin4A2AMM0 362 aa17.23■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Ppef1O35655 650 aa17.23■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Kcnn1Q9EQR3 537 aa17.23■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Syde2E9PUP1 1314 aa17.22■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Wwc2Q6NXJ0 1187 aa17.22■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Flad1Q8R123 492 aa17.22■□□□□ 0.35
Ssr4-208ENSMUST00000166518 CpzQ8R4V4 654 aa17.22■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Sgip1Q8VD37 806 aa17.22■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Zbtb1Q91VL9 713 aa17.21■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Golga2Q921M4 999 aa17.21■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Nip7Q9CXK8 180 aaKnown RBP17.21■□□□□ 0.35
Ssr4-208ENSMUST00000166518 TefQ9JLC6 301 aa17.21■□□□□ 0.35
Ssr4-208ENSMUST00000166518 Prr29B1ARI9 187 aa17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Tgfb2P27090 414 aa17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Tlr8P58682 1032 aa17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Wdhd1P59328 1117 aa17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Atp1b3P97370 278 aa17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Map4k4P97820 1233 aaKnown RBP17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Clcn1Q64347 994 aa17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Rbm26Q6NZN0 1012 aaKnown RBP17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Exoc6Q8R313 802 aa17.2■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Cnnm1Q0GA42 951 aa17.19■□□□□ 0.34
Ssr4-208ENSMUST00000166518 1810065E05RikQ5NC41 235 aa17.19■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Gm12185Q5NCB2 835 aa17.19■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Swt1Q9DBQ9 907 aa17.19■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Irx6Q9ER75 438 aa17.19■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Cfap70D3YVL2 1141 aa17.18■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Rapgef4Q9EQZ6 1011 aa17.18■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Prim1P20664 417 aa17.17■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Zscan21Q07231 555 aa17.17■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Iqsec3Q3TES0 1195 aa17.17■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Ggnbp2Q5SV77 696 aa17.17■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Slfnl1Q8BHW9 410 aa17.16■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Srp68Q8BMA6 625 aaKnown RBP17.16■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Rnaseh2aQ9CWY8 301 aa17.16■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Nsfl1cQ9CZ44 370 aaKnown RBP17.16■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Col1a2Q01149 1372 aa17.15■□□□□ 0.34
Ssr4-208ENSMUST00000166518 SnrkQ8VDU5 748 aa17.15■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Dpf1Q9QX66 387 aa17.15■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Togaram1Q6A070 1776 aaKnown RBP17.15■□□□□ 0.34
Ssr4-208ENSMUST00000166518 Gpr162Q3UN16 588 aa17.14■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Gigyf1Q99MR1 1044 aaKnown RBP17.14■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Ubn2Q80WC1 1314 aa17.14■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Uhrf1bp1B2KF50 1429 aa17.13■□□□□ 0.33
Ssr4-208ENSMUST00000166518 CastP51125 788 aa17.13■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Dusp27Q148W8 1138 aa17.13■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Cyp2c67Q569X9 491 aa17.13■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Camkk2Q8C078 588 aa17.13■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Trip6Q9Z1Y4 480 aa17.13■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Prr5lA2AVJ5 370 aa17.12■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Eif4a1P60843 406 aaKnown RBP17.12■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Taf7Q9R1C0 341 aa17.12■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Esx1O88933 382 aa17.11■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Strn4P58404 760 aa17.11■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Prkab2Q6PAM0 271 aa17.11■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Taf1dQ9D4V4 322 aa17.11■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Prdm11A2AGX3 565 aa17.1■□□□□ 0.33
Ssr4-208ENSMUST00000166518 GckrQ91X44 587 aa17.1■□□□□ 0.33
Ssr4-208ENSMUST00000166518 StrcQ8VIM6 1809 aa17.1■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Cyp2c69E9PXC3 491 aa17.09■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Cyp2c40P56657 491 aa17.09■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Foxp4Q9DBY0 795 aaKnown RBP17.09■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Lama4P97927 1816 aa17.09■□□□□ 0.33
Ssr4-208ENSMUST00000166518 Ddx60E9PZQ1 1711 aa17.08■□□□□ 0.32
Ssr4-208ENSMUST00000166518 Erbb4Q61527 1308 aa17.08■□□□□ 0.32
Ssr4-208ENSMUST00000166518 Stra8P70278 393 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms