RNA–Protein interactions for RNA: ENSMUST00000161003.1

Ctdp1-203, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

TSL 1 (best) BASIC

Gene Ctdp1, Length 1,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1-203ENSMUST00000161003 Chmp7Q8R1T1 451 aa12.98□□□□□ -0.33
Ctdp1-203ENSMUST00000161003 Pdzd9Q9D9M4 266 aa12.98□□□□□ -0.33
Ctdp1-203ENSMUST00000161003 Chrm1P12657 460 aa12.97□□□□□ -0.33
Ctdp1-203ENSMUST00000161003 Amotl1Q9D4H4 968 aa12.97□□□□□ -0.33
Ctdp1-203ENSMUST00000161003 Hdac6Q9Z2V5 1149 aa12.97□□□□□ -0.33
Ctdp1-203ENSMUST00000161003 AtrnQ9WU60 1428 aa12.96□□□□□ -0.33
Ctdp1-203ENSMUST00000161003 Spef2Q8C9J3 1734 aa12.96□□□□□ -0.33
Ctdp1-203ENSMUST00000161003 Igsf1Q7TQA1 1317 aa12.96□□□□□ -0.33
Ctdp1-203ENSMUST00000161003 Znf710Q3U288 666 aa12.95□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Tsen2Q6P7W5 460 aa12.95□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Ints5Q8CHT3 1018 aa12.95□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Ssfa2Q922B9 1252 aa12.95□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Trpc5Q9QX29 975 aa12.95□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Aebp2Q9Z248 504 aaKnown RBP12.95□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Aox2Q5SGK3 1345 aa12.94□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Ubxn2bQ0KL01 331 aa12.94□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 MeiocA2AG06 965 aa12.93□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Wdr66E9Q743 1299 aa12.93□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Fchsd2Q3USJ8 740 aa12.93□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Stk31Q99MW1 1018 aa12.93□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 U2af1Q9D883 239 aaKnown RBP12.93□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 IncenpQ9WU62 880 aa12.93□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Kcnq2Q9Z351 759 aa12.93□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Jdp2P97875 163 aa12.92□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Msl1Q6PDM1 616 aa12.92□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Rab11fip3Q8CHD8 1047 aa12.92□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Emilin1Q99K41 1017 aa12.92□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Ccdc155Q80VJ8 648 aa12.91□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Jmjd4Q8BFT6 427 aa12.91□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Atg3Q9CPX6 314 aa12.91□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 GsdmaQ9EST1 446 aa12.91□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Ubr2Q6WKZ8 1755 aa12.9□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Prim1P20664 417 aa12.9□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Smarcc1P97496 1104 aa12.9□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 Tcerg1Q8CGF7 1100 aaKnown RBP12.9□□□□□ -0.34
Ctdp1-203ENSMUST00000161003 CoblQ5NBX1 1337 aaKnown RBP12.89□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Trpm3Q5F4S9 1721 aa12.89□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Nkx2-3P97334 362 aa12.89□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 TmpoQ61033 693 aaKnown RBP12.89□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Cap2Q9CYT6 476 aa12.89□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Anp32bQ9EST5 272 aaKnown RBP12.89□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Cabp2Q9JLK4 216 aa12.89□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Zswim8Q3UHH1 1832 aaKnown RBP12.88□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Gm13023A2A8N2 498 aa12.88□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Snap23O09044 210 aa12.88□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 NppbP40753 121 aa12.88□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Smg7Q5RJH6 1138 aaKnown RBP12.88□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Dcaf5Q80T85 946 aa12.88□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Ppm1fQ8CGA0 452 aa12.88□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Miga2Q8BK03 593 aa12.87□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Pcdhb17Q91VD8 799 aa12.87□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Kcna3P16390 528 aa12.86□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Hirip3Q8BLH7 601 aa12.86□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Iqcf3Q9D498 203 aa12.86□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 AceP09470 1312 aa12.86□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 C4bP01029 1738 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Msh6P54276 1358 aaKnown RBP12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Ubr3Q5U430 1889 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Lrp5Q91VN0 1614 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Gm45233A0A0N4SVE0 221 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 ErfeQ6PGN1 340 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Col23a1Q8K4G2 532 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Sumf1Q8R0F3 372 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Sos1Q62245 1319 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Col11a2Q64739 1736 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Tiam2Q6ZPF3 1715 aa12.85□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Kiaa1107Q80TK0 1369 aa12.84□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Q7TT23 1179 aa12.84□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Efcab2Q9CQ46 164 aa12.84□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Mtfr1lQ9CWE0 289 aa12.84□□□□□ -0.35
Ctdp1-203ENSMUST00000161003 Kndc1Q0KK55 1742 aa12.83□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Rad23bP54728 416 aa12.83□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Znf579Q80VM4 562 aa12.83□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Bclaf1Q8K019 919 aaKnown RBP12.83□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Nav1Q8CH77 1875 aa12.82□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Ric1Q69ZJ7 1422 aa12.82□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Rtf1A2AQ19 715 aaKnown RBP12.82□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Rpgrip1lQ8CG73 1264 aa12.82□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Abcc12Q80WJ6 1366 aa12.81□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Sned1Q70E20 1403 aa12.81□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Prom2Q3UUY6 835 aa12.81□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Mapk8ip3Q9ESN9 1337 aa12.81□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Spata31d1bE9QA57 1361 aa12.81□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Plch1Q4KWH5 1682 aa12.8□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Magea6O89010 325 aa12.8□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Q4VA45 678 aa12.8□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Magea3Q6T340 320 aa12.8□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 RtcbQ99LF4 505 aaKnown RBP12.8□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 TMEM121BQ99MX7 572 aa12.8□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Irx6Q9ER75 438 aa12.8□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Usp21Q9QZL6 566 aa12.8□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Rgl2Q61193 778 aa12.79□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Myo5bP21271 1818 aa12.78□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 E9Q0B3 247 aa12.78□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Apaf1O88879 1249 aa12.78□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Clcn1Q64347 994 aa12.78□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Btbd11Q6GQW0 1109 aa12.78□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Zcwpw1Q6IR42 630 aa12.78□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Znrd1-asQ8R0E5 213 aa12.78□□□□□ -0.36
Ctdp1-203ENSMUST00000161003 Syde2E9PUP1 1314 aa12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms