RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Stxbp4Q9WV89 557 aa20.86■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Hmg20bQ9Z104 317 aa20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Gm21671G3UY31 267 aa20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 EvcP57680 1005 aa20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Cavin2Q63918 418 aaKnown RBP20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Slc12a5Q91V14 1138 aa20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 CenphQ9QYM8 241 aa20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Sel1lQ9Z2G6 790 aa20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Tubb4aQ9D6F9 444 aa20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 KdrP35918 1367 aa20.85■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Frmd3Q8BHD4 595 aa20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Ccdc150Q8CDI7 1110 aa20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 CenppQ9CZ92 286 aa20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Cpsf1Q9EPU4 1441 aaKnown RBP20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Cdca8Q8BHX3 289 aa20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Afap1Q80YS6 731 aa20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Bag3Q9JLV1 577 aaKnown RBP20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Zmym3Q9JLM4 1370 aa20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Mctp2Q5RJH2 878 aa20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Atp7aQ64430 1491 aa20.84■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Neo1P97798 1493 aa20.83■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Rbm27Q5SFM8 1060 aaKnown RBP20.83■□□□□ 0.93
Col4a3bp-202ENSMUST00000109444 Mcm3P25206 812 aaKnown RBP20.83■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Aldh8a1Q8BH00 487 aa20.83■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Slc13a4Q8BZ82 625 aa20.83■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Cbx1P83917 185 aaKnown RBP20.83■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Maats1Q8BRC6 783 aa20.83■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Map3k13Q1HKZ5 959 aa20.82■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Tmc2Q8R4P4 888 aa20.82■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Sass6Q80UK7 654 aa20.82■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Idi2Q8BFZ6 227 aa20.82■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Mtmr3Q8K296 1196 aa20.82■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Atf7Q8R0S1 413 aa20.82■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Iqca1Q9CUL5 857 aa20.82■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Cfap157Q0VFX2 523 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Fkbp5Q64378 456 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Bcar3Q9QZK2 820 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Fam135bQ9DAI6 1403 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Gm21698A0A087WQP8 267 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 InsrP15208 1372 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Fancd2Q80V62 1450 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Commd10Q8JZY2 202 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Nap1l2P51860 460 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Cep55Q8BT07 462 aa20.81■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Luzp1Q8R4U7 1068 aaKnown RBP20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Bloc1s2Q9CWG9 143 aa20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Gapvd1Q6PAR5 1458 aa20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Uri1Q3TLD5 531 aa20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Brd1E9PZ26 1189 aaKnown RBP20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Eif3bQ8JZQ9 803 aaKnown RBP20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Trap1aP19473 224 aa20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Hspa4Q61316 841 aa20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Mmel1Q9JLI3 765 aa20.8■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Ccdc181Q80ZU5 509 aa20.79■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Thoc2B1AZI6 1594 aaKnown RBP20.79■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Gas2l3Q3UWW6 683 aa20.79■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Tmem87bQ8BKU8 555 aa20.79■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Sall3Q62255 1320 aa20.79■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Ddx58Q6Q899 926 aa20.78■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 HnrnpmQ9D0E1 729 aaKnown RBP20.78■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Jakmip3Q5DTN8 844 aa20.78■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Peg3Q3URU2 1571 aa20.78■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Ttc19Q8CC21 365 aa20.78■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Elp1Q7TT37 1333 aaKnown RBP20.78■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Ncbp1Q3UYV9 790 aaKnown RBP20.78■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Kdm2bQ6P1G2 1309 aa20.78■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 OvosQ3UU35 1456 aa20.77■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Gm21663A0A0G2JE01 267 aa20.77■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 5031410I06RikE9Q4E0 267 aa20.77■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Gm1979E9QAN3 267 aa20.77■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Gm5862K7N5V5 267 aa20.77■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Gm10220K7N660 267 aa20.77■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 LyarQ08288 388 aaKnown RBP20.77■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Naip6Q9JIB6 1403 aa20.77■□□□□ 0.92
Col4a3bp-202ENSMUST00000109444 Sbno1Q689Z5 1390 aa20.77■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ktn1Q61595 1327 aaKnown RBP20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ppfia1B2RXQ2 1266 aa20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Trim27Q62158 513 aa20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ampd3O08739 766 aa20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Nkx1-2P42580 305 aa20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Trim25Q61510 634 aaKnown RBP20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Trim34aQ99PP6 485 aa20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ccdc66Q6NS45 935 aa20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 TxlnaQ6PAM1 554 aaKnown RBP20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 ZgpatQ8VDM1 511 aa20.76■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Usp25P57080 1055 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Mrpl44Q9CY73 333 aaKnown RBP20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 BC005561E9Q5E2 1589 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Q3UJC8 639 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Cep135Q6P5D4 1140 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Ccdc172Q810N9 267 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Srgap1Q91Z69 1062 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Snw1Q9CSN1 536 aaKnown RBP20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Trim30cD3YVI9 513 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Erlin1Q91X78 346 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Smtnl1Q99LM3 459 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Catsper2A2ARP9 588 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Rsph6aQ8CDR2 708 aa20.75■□□□□ 0.91
Col4a3bp-202ENSMUST00000109444 Speer4bQ9D9F7 267 aa20.74■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 124.2 ms