RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Otud6bQ8K2H2 294 aa18.53■□□□□ 0.56
Clcn3-203ENSMUST00000093490 Ccdc102aQ3TMW1 549 aa18.53■□□□□ 0.56
Clcn3-203ENSMUST00000093490 Rbm26Q6NZN0 1012 aaKnown RBP18.53■□□□□ 0.56
Clcn3-203ENSMUST00000093490 Cavin1O54724 392 aa18.52■□□□□ 0.56
Clcn3-203ENSMUST00000093490 Sycp1Q62209 993 aa18.52■□□□□ 0.56
Clcn3-203ENSMUST00000093490 Ankle2Q6P1H6 964 aa18.52■□□□□ 0.56
Clcn3-203ENSMUST00000093490 L3mbtl2P59178 703 aa18.52■□□□□ 0.56
Clcn3-203ENSMUST00000093490 EappQ5BU09 281 aa18.52■□□□□ 0.56
Clcn3-203ENSMUST00000093490 Cyp26c1B2RXA7 518 aa18.52■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Slc12a5Q91V14 1138 aa18.52■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Peg3Q3URU2 1571 aa18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Map3k13Q1HKZ5 959 aa18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 IkQ9Z1M8 557 aaKnown RBP18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Kdm3aQ6PCM1 1323 aa18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 NpatQ8BMA5 1420 aa18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Jakmip2D3YXK0 820 aa18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Spg7Q3ULF4 781 aa18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Ptpdc1Q6NZK8 747 aa18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Tmem87bQ8BKU8 555 aa18.51■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Astn2Q80Z10 1352 aa18.5■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Zscan20B2KFW1 1030 aa18.5■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Babam1Q3UI43 333 aa18.5■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Znf518aB2RRF6 1478 aaKnown RBP18.5■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Irf9Q61179 399 aa18.5■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Luc7lQ9CYI4 371 aaKnown RBP18.5■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Ccdc96Q9CR92 584 aa18.5■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Maco1Q7TQE6 664 aaKnown RBP18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 CenpqQ9CPQ5 267 aa18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Gli2Q0VGT2 1544 aa18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 NcapgE9PWG6 1004 aa18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 ArsiQ32KI9 573 aa18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Fsd2Q8BZ52 692 aa18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Rrbp1Q99PL5 1605 aaKnown RBP18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 AidaQ8C4Q6 305 aa18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Wdr33Q8K4P0 1330 aaKnown RBP18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Prpf4bQ61136 1007 aaKnown RBP18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Slu7Q8BHJ9 585 aa18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Tango6Q8C3S2 1079 aa18.49■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Stim1P70302 685 aa18.48■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Nap1l2P51860 460 aa18.48■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Strn4P58404 760 aa18.48■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Paf1Q8K2T8 535 aa18.48■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Abcc2Q8VI47 1543 aa18.48■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Gps2Q921N8 327 aa18.48■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Erlin2Q8BFZ9 340 aa18.48■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Tfip11Q9ERA6 838 aaKnown RBP18.47■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Slf2Q6P9P0 1278 aa18.47■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Rrs1Q9CYH6 365 aaKnown RBP18.47■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Scaf1Q5U4C3 1256 aaKnown RBP18.47■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Spag5Q7TME2 1165 aa18.47■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Gnat3Q3V3I2 354 aa18.46■□□□□ 0.55
Clcn3-203ENSMUST00000093490 TxlnbQ8VBT1 685 aa18.46■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Ssh2Q5SW75 1423 aa18.46■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Syce3B5KM66 88 aa18.46■□□□□ 0.55
Clcn3-203ENSMUST00000093490 GpkowQ56A08 488 aa18.46■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Ddx19aQ61655 478 aaKnown RBP18.46■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Plekhm2Q80TQ5 1018 aa18.46■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Nsfl1cQ9CZ44 370 aaKnown RBP18.46■□□□□ 0.55
Clcn3-203ENSMUST00000093490 Samm50Q8BGH2 469 aa18.45■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Rad17Q6NXW6 688 aa18.45■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Myd88P22366 296 aa18.45■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Pdcl2Q78Y63 240 aa18.45■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Cfap45Q9D9U9 551 aa18.45■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Lmbr1Q9JIT0 490 aa18.45■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Mcm4P49717 862 aa18.44■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Cadps2Q8BYR5 1297 aa18.44■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Kank1E9Q238 1360 aa18.44■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Znf771Q8BJ90 317 aa18.44■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Rufy2Q8R4C2 606 aa18.44■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Ifit1bl2Q3U687 466 aa18.44■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Slc26a8Q8R0C3 999 aa18.44■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Echdc1Q9D9V3 322 aa18.43■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Tmc1Q8R4P5 757 aa18.43■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Erich3F6QRE9 1637 aa18.43■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Pik3r4Q8VD65 1358 aa18.43■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Fsd1Q7TPM6 496 aa18.43■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Tspyl2Q7TQI8 677 aa18.43■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Abcd1P48410 736 aa18.43■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Soga3Q6NZL0 945 aa18.43■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Cwc25Q9DBF7 416 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Bag3Q9JLV1 577 aaKnown RBP18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 ItpripQ3TNL8 555 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Amotl1Q9D4H4 968 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Irgm2A0A140LIF8 407 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Synj2Q9D2G5 1434 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Spty2d1Q68FG3 682 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Ppp1r9bQ6R891 817 aaKnown RBP18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Hvcn1Q3U2S8 269 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Ankrd13dQ6PD24 605 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Vps37dQ810I0 261 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Nap1l5Q9JJF0 156 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Stxbp4Q9WV89 557 aa18.42■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Ccdc155Q80VJ8 648 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Trim55G3X8Y1 545 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Rnf41Q8BH75 317 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Ginm1Q91WR6 327 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Adgrl3Q80TS3 1537 aa18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Pdia4P08003 638 aaKnown RBP18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Lrrfip1Q3UZ39 729 aaKnown RBP18.41■□□□□ 0.54
Clcn3-203ENSMUST00000093490 Gimap8Q75N62 688 aa18.41■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms