RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Ptpdc1Q6NZK8 747 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Frat1P70339 274 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Ankrd1Q9CR42 319 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 CrcpO35427 148 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Ddx46Q569Z5 1032 aaKnown RBP19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Sycp2Q9CUU3 1500 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Iffo1Q8BXL9 562 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 ZwintQ9CQU5 252 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Bin1O08539 588 aaKnown RBP19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 EvcP57680 1005 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Odf2lQ9D478 642 aa19.04■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Strn4P58404 760 aa19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Cfap53Q9D439 514 aa19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Gm10093D3YYI8 482 aa19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Hdac1O09106 482 aaKnown RBP19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Ccdc57Q6PHN1 1016 aa19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Mphosph10Q810V0 681 aaKnown RBP19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Gbp9Q8BTS3 619 aa19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Brd3Q8K2F0 726 aaKnown RBP19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 PpanQ91YU8 470 aaKnown RBP19.03■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Crybg2B7ZCC2 1516 aa19.02■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Irf5P56477 497 aa19.02■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Cux2P70298 1426 aa19.02■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Eftud2O08810 971 aaKnown RBP19.02■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Zswim4Q8C7B8 1101 aa19.02■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Naa15Q80UM3 865 aaKnown RBP19.02■□□□□ 0.64
Col17a1-202ENSMUST00000086923 Sdad1Q80UZ2 687 aaKnown RBP19.01■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Gadd45bP22339 160 aa19.01■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Ccdc148Q6P5U8 527 aa19.01■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Ccdc121E9Q6D3 323 aa19.01■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Znf131Q8K3J5 619 aa19.01■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Six6os1Q9CTN5 574 aa19.01■□□□□ 0.63
Col17a1-202ENSMUST00000086923 AknaQ80VW7 1404 aa19■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Zfp597E9Q6S0 419 aa19■□□□□ 0.63
Col17a1-202ENSMUST00000086923 EsrrbQ61539 433 aa19■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Rps6ka5Q8C050 863 aa19■□□□□ 0.63
Col17a1-202ENSMUST00000086923 ZfxP17012 799 aa19■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Gbp1Q01514 589 aa19■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Map3k11Q80XI6 850 aa19■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Srgap3Q812A2 1099 aa18.99■□□□□ 0.63
Col17a1-202ENSMUST00000086923 SltmQ8CH25 1031 aaKnown RBP18.99■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Rnf34Q99KR6 376 aa18.99■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Sept14Q9DA97 430 aa18.99■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Hdhd2Q3UGR5 259 aa18.99■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Wdr3Q8BHB4 942 aaKnown RBP18.99■□□□□ 0.63
Col17a1-202ENSMUST00000086923 NinlQ6ZQ12 1394 aa18.99■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Tex35Q14BK3 207 aa18.98■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Cwc27Q3TKY6 469 aa18.98■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Zbtb12Q9Z150 459 aa18.98■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Gm28510A0A087WP28 240 aa18.98■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Zfpm1O35615 995 aa18.98■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Puf60Q3UEB3 564 aaKnown RBP18.98■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Rassf10Q8BL43 508 aa18.98■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Tyro3P55144 880 aa18.98■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Cep89Q9CZX2 791 aa18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Gm21680A0A0G2JGR8 267 aa18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Syt1P46096 421 aa18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Fbf1A2A870 1173 aa18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Lonp2Q9DBN5 852 aa18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Tubb4bP68372 445 aaKnown RBP18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Vps41Q5KU39 853 aa18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Zkscan4Q5SZT6 480 aa18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Spats2Q8K1N4 545 aaKnown RBP18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Smarca5Q91ZW3 1051 aaKnown RBP18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Ndufab1Q9CR21 156 aa18.97■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Pip4k2bQ80XI4 416 aa18.96■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Lemd3Q9WU40 921 aa18.96■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Sox12Q04890 314 aa18.96■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Rassf2Q8BMS9 326 aa18.96■□□□□ 0.63
Col17a1-202ENSMUST00000086923 Irgm2A0A140LIF8 407 aa18.95■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Ccdc162pQ0VG85 912 aa18.95■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Bms1Q6PGF5 1284 aaKnown RBP18.95■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Hoxa7P02830 229 aa18.95■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Tubb5P99024 444 aaKnown RBP18.95■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Zpr1Q62384 459 aa18.95■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Rufy2Q8R4C2 606 aa18.95■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Top1Q04750 767 aaKnown RBP18.94■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Tsga10Q6NY15 697 aa18.94■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Pms1Q8K119 917 aa18.94■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Ms4a1P19437 291 aa18.94■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Elf2Q9JHC9 593 aa18.94■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Ccdc6D3YZP9 469 aa18.94■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Rbbp5Q8BX09 538 aaKnown RBP18.94■□□□□ 0.62
Col17a1-202ENSMUST00000086923 StambpQ9CQ26 424 aa18.94■□□□□ 0.62
Col17a1-202ENSMUST00000086923 ClgnP52194 611 aa18.93■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Diaph1O08808 1255 aa18.93■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Cecr2E9Q2Z1 1453 aa18.93■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Rfc1P35601 1131 aa18.93■□□□□ 0.62
Col17a1-202ENSMUST00000086923 EappQ5BU09 281 aa18.93■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Ccdc42Q5SV66 316 aa18.92■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Atp2b1G5E829 1220 aa18.92■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Ppp2r3dQ9Z176 491 aa18.92■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Exoc3l2D3YUP5 789 aa18.92■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Suds3Q8BR65 328 aa18.92■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Mtx1P47802 317 aa18.91■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Irx1P81068 480 aa18.91■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Specc1lQ2KN98 1118 aaKnown RBP18.91■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Lmbr1Q9JIT0 490 aa18.91■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Gm21190A0A0G2JGJ6 266 aa18.91■□□□□ 0.62
Col17a1-202ENSMUST00000086923 Arfgap2Q99K28 520 aa18.91■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms