RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Map2P20357 1828 aa19.58■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Tpx2A2APB8 745 aaKnown RBP19.57■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Dnajc10Q9DC23 793 aa19.57■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Tlr7P58681 1050 aa19.57■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Gsdma3Q5Y4Y6 464 aa19.57■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Jakmip1Q8BVL9 626 aa19.57■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Mphosph10Q810V0 681 aaKnown RBP19.57■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Ipo4Q8VI75 1082 aa19.57■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Atf5O70191 283 aa19.56■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Nol12Q8BG17 217 aa19.56■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Adgrb1Q3UHD1 1582 aa19.56■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Msh6P54276 1358 aaKnown RBP19.55■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Cpa2Q504N0 417 aa19.55■□□□□ 0.72
Ckap4-201ENSMUST00000053871 PogkQ80TC5 607 aa19.55■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Elp1Q7TT37 1333 aaKnown RBP19.55■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Ubr1O70481 1757 aa19.54■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Igsf1Q7TQA1 1317 aa19.54■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Btbd11Q6GQW0 1109 aa19.54■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Trim44Q9QXA7 346 aa19.54■□□□□ 0.72
Ckap4-201ENSMUST00000053871 PtmaP26350 111 aa19.54■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Ccdc155Q80VJ8 648 aa19.53■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Mcmdc2E9Q956 681 aa19.53■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Nkx2-3P97334 362 aa19.53■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Zbtb45Q52KG4 520 aa19.53■□□□□ 0.72
Ckap4-201ENSMUST00000053871 NexnQ7TPW1 607 aa19.53■□□□□ 0.72
Ckap4-201ENSMUST00000053871 4933402E13RikQ9D4D2 429 aa19.53■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Col16a1Q8BLX7 1580 aa19.53■□□□□ 0.72
Ckap4-201ENSMUST00000053871 GphnQ8BUV3 769 aaKnown RBP19.53■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Adamtsl3G3UXC7 1706 aa19.52■□□□□ 0.72
Ckap4-201ENSMUST00000053871 Phf14Q9D4H9 881 aa19.52■□□□□ 0.71
Ckap4-201ENSMUST00000053871 MccE9PWI3 1003 aa19.51■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Ier5O89113 308 aa19.51■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Paxip1Q6NZQ4 1056 aa19.51■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Brpf1B2RRD7 1212 aa19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Gm10471E9Q1C7 252 aa19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 EvcP57680 1005 aa19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Zdhhc9P59268 364 aa19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Eif4a1P60843 406 aaKnown RBP19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 NalcnQ8BXR5 1738 aa19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Pa2g4P50580 394 aaKnown RBP19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Filip1lQ6P6L0 1131 aa19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Tmx3Q8BXZ1 456 aa19.5■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Gadd45bP22339 160 aa19.49■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Amotl1Q9D4H4 968 aa19.49■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Mrps27Q8BK72 415 aaKnown RBP19.48■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Stk36Q69ZM6 1316 aa19.48■□□□□ 0.71
Ckap4-201ENSMUST00000053871 CoilQ5SU73 570 aa19.48■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Jarid2Q62315 1234 aa19.48■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Tet3Q8BG87 1668 aa19.47■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Mlh1Q9JK91 760 aa19.47■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Pnpla7A2AJ88 1352 aa19.47■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Map3k2Q61083 619 aa19.46■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Pmfbp1Q9WVQ0 1022 aa19.46■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Unc5clQ6R653 518 aa19.46■□□□□ 0.71
Ckap4-201ENSMUST00000053871 MlecQ6ZQI3 291 aaKnown RBP19.46■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Erich6bQ9D4S6 220 aa19.46■□□□□ 0.71
Ckap4-201ENSMUST00000053871 Fmnl2A2APV2 1086 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 GnpatP98192 678 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Tgfb1i1Q62219 461 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Evi5lH3BKQ3 813 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 F2rP30558 430 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Znf692Q3U381 531 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 EspnlQ3UYR4 1005 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Edc3Q8K2D3 508 aaKnown RBP19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Slx4ipQ9D7Y9 413 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Tceal9Q9DD24 104 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 TimelessQ9R1X4 1197 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Ahnak2E9PYB0 1738 aaKnown RBP19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 D430041D05RikF6ZGR6 1678 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Mum1Q6DID5 682 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Brf1Q8CFK2 676 aa19.45■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Bend3Q6PAL0 825 aa19.44■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Slit2Q9R1B9 1521 aa19.44■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Cnksr1A2A9K7 700 aa19.44■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Ddx17Q501J6 650 aaKnown RBP19.44■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Ano8Q6PB70 1060 aa19.44■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Rnf214Q8BFU3 668 aaKnown RBP19.43■□□□□ 0.7
Ckap4-201ENSMUST00000053871 LlphQ9D945 130 aaKnown RBP19.43■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Gm9992B2RWK3 458 aa19.43■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Unc93aQ710D3 458 aa19.43■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Gimap6Q8K349 305 aa19.43■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Echdc1Q9D9V3 322 aa19.43■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Syce3B5KM66 88 aa19.43■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Vwa3bJ9JI28 736 aa19.43■□□□□ 0.7
Ckap4-201ENSMUST00000053871 ScaperF8VQ70 1398 aaKnown RBP19.42■□□□□ 0.7
Ckap4-201ENSMUST00000053871 C5P06684 1680 aa19.42■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Pof1bQ8K4L4 587 aa19.42■□□□□ 0.7
Ckap4-201ENSMUST00000053871 AnlnQ8K298 1121 aaKnown RBP19.42■□□□□ 0.7
Ckap4-201ENSMUST00000053871 St18Q80TY4 1045 aa19.41■□□□□ 0.7
Ckap4-201ENSMUST00000053871 GckrQ91X44 587 aa19.41■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Pdzrn3Q69ZS0 1063 aa19.41■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Hspa2P17156 633 aa19.4■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Dzip1Q8BMD2 852 aa19.4■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Sytl4Q9R0Q1 673 aa19.4■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Arap3Q8R5G7 1538 aa19.4■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Kcnh5Q920E3 988 aa19.4■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Babam1Q3UI43 333 aa19.4■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Rbm27Q5SFM8 1060 aaKnown RBP19.4■□□□□ 0.7
Ckap4-201ENSMUST00000053871 Nol11Q8BJW5 723 aaKnown RBP19.4■□□□□ 0.7
Ckap4-201ENSMUST00000053871 PtprvP70289 1705 aa19.4■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms