RNA–Protein interactions for RNA: ENSMUST00000053287.5

Usp42-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp42, Length 5,151 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42-201ENSMUST00000053287 Gjb2Q00977 226 aa17.03■□□□□ 0.32
Usp42-201ENSMUST00000053287 Snx13Q6PHS6 957 aa17.03■□□□□ 0.32
Usp42-201ENSMUST00000053287 Iffo2Q8R2V2 512 aa17.03■□□□□ 0.32
Usp42-201ENSMUST00000053287 Ift57Q8BXG3 429 aa17.03■□□□□ 0.32
Usp42-201ENSMUST00000053287 Stk3Q9JI10 497 aa17.03■□□□□ 0.32
Usp42-201ENSMUST00000053287 Zfyve16Q80U44 1528 aa17.03■□□□□ 0.32
Usp42-201ENSMUST00000053287 Tpm1P58771 284 aa17.03■□□□□ 0.32
Usp42-201ENSMUST00000053287 Wdr93Q402B2 695 aa17.02■□□□□ 0.32
Usp42-201ENSMUST00000053287 Bms1Q6PGF5 1284 aaKnown RBP17.02■□□□□ 0.32
Usp42-201ENSMUST00000053287 Uhrf1bp1B2KF50 1429 aa17.02■□□□□ 0.32
Usp42-201ENSMUST00000053287 Zfp51Q3U4L8 781 aa17.02■□□□□ 0.32
Usp42-201ENSMUST00000053287 Znf608Q56A10 1511 aa17.02■□□□□ 0.31
Usp42-201ENSMUST00000053287 Mctp1E9PV86 951 aa17.02■□□□□ 0.31
Usp42-201ENSMUST00000053287 Cnnm3Q32NY4 713 aa17.02■□□□□ 0.31
Usp42-201ENSMUST00000053287 Zranb1Q7M760 708 aa17.01■□□□□ 0.31
Usp42-201ENSMUST00000053287 Abcc1O35379 1528 aa17.01■□□□□ 0.31
Usp42-201ENSMUST00000053287 Slc4a10Q5DTL9 1118 aa17.01■□□□□ 0.31
Usp42-201ENSMUST00000053287 Sh3bp1P55194 680 aa17.01■□□□□ 0.31
Usp42-201ENSMUST00000053287 Pdzrn3Q69ZS0 1063 aa17.01■□□□□ 0.31
Usp42-201ENSMUST00000053287 Noc3lQ8VI84 807 aaKnown RBP17.01■□□□□ 0.31
Usp42-201ENSMUST00000053287 CenpqQ9CPQ5 267 aa17.01■□□□□ 0.31
Usp42-201ENSMUST00000053287 Atp10dQ8K2X1 1416 aa17.01■□□□□ 0.31
Usp42-201ENSMUST00000053287 Cers3Q1A3B0 383 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Cep135Q6P5D4 1140 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Zfp397Q7TNK4 527 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Klhdc4Q921I2 584 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Hoxa7P02830 229 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 CrebrfQ8CDG5 640 aaKnown RBP17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Q9D9S1 216 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Tceal9Q9DD24 104 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Mx2Q9WVP9 655 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 MecomP14404 1042 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Nxf2Q4ZGD8 691 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 EappQ5BU09 281 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Ddx11Q6AXC6 880 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Ubxn4Q8VCH8 506 aa17■□□□□ 0.31
Usp42-201ENSMUST00000053287 Atg4a-psA0A0G2JFS9 396 aa16.99■□□□□ 0.31
Usp42-201ENSMUST00000053287 Atg4aQ8C9S8 396 aa16.99■□□□□ 0.31
Usp42-201ENSMUST00000053287 Ppp1r42Q8R1Z4 357 aa16.99■□□□□ 0.31
Usp42-201ENSMUST00000053287 Efcab6Q6P1E8 1516 aa16.99■□□□□ 0.31
Usp42-201ENSMUST00000053287 Utp18Q5SSI6 552 aaKnown RBP16.99■□□□□ 0.31
Usp42-201ENSMUST00000053287 Arid3cA6PWV5 409 aa16.99■□□□□ 0.31
Usp42-201ENSMUST00000053287 Myom1Q62234 1667 aaKnown RBP16.99■□□□□ 0.31
Usp42-201ENSMUST00000053287 Cfap65Q3V0B4 1847 aa16.99■□□□□ 0.31
Usp42-201ENSMUST00000053287 Slx4ipQ9D7Y9 413 aa16.98■□□□□ 0.31
Usp42-201ENSMUST00000053287 Cwc27Q3TKY6 469 aa16.98■□□□□ 0.31
Usp42-201ENSMUST00000053287 Robo2Q7TPD3 1470 aa16.98■□□□□ 0.31
Usp42-201ENSMUST00000053287 Zscan22Q8BGS5 496 aa16.98■□□□□ 0.31
Usp42-201ENSMUST00000053287 Ercc6lQ8BHK9 1240 aa16.98■□□□□ 0.31
Usp42-201ENSMUST00000053287 Trpm1Q2TV84 1622 aa16.98■□□□□ 0.31
Usp42-201ENSMUST00000053287 Tnnt1O88346 262 aa16.97■□□□□ 0.31
Usp42-201ENSMUST00000053287 Kif2aP28740 705 aa16.97■□□□□ 0.31
Usp42-201ENSMUST00000053287 Dnaaf4Q8R368 420 aa16.97■□□□□ 0.31
Usp42-201ENSMUST00000053287 Ttc37F8VPK0 1563 aa16.97■□□□□ 0.31
Usp42-201ENSMUST00000053287 Hook1Q8BIL5 728 aa16.97■□□□□ 0.31
Usp42-201ENSMUST00000053287 Atp7bQ64446 1462 aa16.97■□□□□ 0.31
Usp42-201ENSMUST00000053287 Mcm10Q0VBD2 885 aa16.96■□□□□ 0.31
Usp42-201ENSMUST00000053287 Rims1Q99NE5 1463 aa16.96■□□□□ 0.31
Usp42-201ENSMUST00000053287 Krt85Q9Z2T6 507 aa16.96■□□□□ 0.31
Usp42-201ENSMUST00000053287 Scaf1Q5U4C3 1256 aaKnown RBP16.96■□□□□ 0.31
Usp42-201ENSMUST00000053287 Spag5Q7TME2 1165 aa16.96■□□□□ 0.31
Usp42-201ENSMUST00000053287 MpripP97434 1024 aa16.96■□□□□ 0.3
Usp42-201ENSMUST00000053287 Rab3gap1Q80UJ7 981 aa16.95■□□□□ 0.3
Usp42-201ENSMUST00000053287 MpndQ3TV65 487 aa16.95■□□□□ 0.3
Usp42-201ENSMUST00000053287 Mns1Q61884 491 aa16.95■□□□□ 0.3
Usp42-201ENSMUST00000053287 Slu7Q8BHJ9 585 aa16.95■□□□□ 0.3
Usp42-201ENSMUST00000053287 Zkscan5Q9Z1D8 819 aa16.95■□□□□ 0.3
Usp42-201ENSMUST00000053287 Ms4a1P19437 291 aa16.95■□□□□ 0.3
Usp42-201ENSMUST00000053287 Tyro3P55144 880 aa16.95■□□□□ 0.3
Usp42-201ENSMUST00000053287 4930548H24RikQ9D496 437 aa16.94■□□□□ 0.3
Usp42-201ENSMUST00000053287 ShprhQ7TPQ3 1674 aa16.94■□□□□ 0.3
Usp42-201ENSMUST00000053287 Psma5Q9Z2U1 241 aaKnown RBP16.94■□□□□ 0.3
Usp42-201ENSMUST00000053287 Ano6Q6P9J9 911 aa16.94■□□□□ 0.3
Usp42-201ENSMUST00000053287 Aifm3Q3TY86 605 aa16.94■□□□□ 0.3
Usp42-201ENSMUST00000053287 Arglu1Q3UL36 271 aaKnown RBP16.94■□□□□ 0.3
Usp42-201ENSMUST00000053287 Ccdc66Q6NS45 935 aa16.94■□□□□ 0.3
Usp42-201ENSMUST00000053287 Mum1Q6DID5 682 aa16.93■□□□□ 0.3
Usp42-201ENSMUST00000053287 Cfap58B2RW38 873 aa16.93■□□□□ 0.3
Usp42-201ENSMUST00000053287 Stac3Q8BZ71 360 aa16.93■□□□□ 0.3
Usp42-201ENSMUST00000053287 Ppp6r1Q7TSI3 856 aa16.93■□□□□ 0.3
Usp42-201ENSMUST00000053287 Top1mtQ8R4U6 593 aa16.93■□□□□ 0.3
Usp42-201ENSMUST00000053287 Paxbp1P58501 919 aa16.93■□□□□ 0.3
Usp42-201ENSMUST00000053287 Prune1Q8BIW1 454 aa16.93■□□□□ 0.3
Usp42-201ENSMUST00000053287 Naa30Q8CES0 364 aa16.93■□□□□ 0.3
Usp42-201ENSMUST00000053287 Serpinb6bO08804 377 aa16.92■□□□□ 0.3
Usp42-201ENSMUST00000053287 Pes1Q9EQ61 584 aaKnown RBP16.92■□□□□ 0.3
Usp42-201ENSMUST00000053287 Znf326O88291 580 aa16.92■□□□□ 0.3
Usp42-201ENSMUST00000053287 Sh3bp5Q9Z131 463 aa16.92■□□□□ 0.3
Usp42-201ENSMUST00000053287 Rnf20Q5DTM8 973 aa16.92■□□□□ 0.3
Usp42-201ENSMUST00000053287 Oxsr1Q6P9R2 527 aa16.92■□□□□ 0.3
Usp42-201ENSMUST00000053287 Plcd3Q8K2J0 785 aa16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 Ccer1Q9CQL2 403 aa16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 Ggnbp2Q5SV77 696 aa16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 Gpatch3Q8BIY1 525 aa16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 Dnajc14Q921R4 703 aa16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 Q9D9H8 365 aa16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 Trap1aP19473 224 aa16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 MarsQ68FL6 902 aaKnown RBP16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 Kif24Q6NWW5 1356 aa16.91■□□□□ 0.3
Usp42-201ENSMUST00000053287 Ptch1Q61115 1434 aa16.91■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 296.6 ms