RNA–Protein interactions for RNA: ENSMUST00000021706.10

Traf3-201, Transcript of TNF receptor-associated factor 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf3, Length 7,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-201ENSMUST00000021706 Mbd5B1AYB6 1498 aa12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Tex14Q7M6U3 1450 aa12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Vamp4O70480 141 aa12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Zbtb45Q52KG4 520 aa12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 NaspQ99MD9 773 aaKnown RBP12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Znf704Q9ERQ3 566 aa12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Nkx1-2P42580 305 aa12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Wwc1Q5SXA9 1104 aa12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Flad1Q8R123 492 aa12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Rrp9Q91WM3 475 aaKnown RBP12.26□□□□□ -0.45
Traf3-201ENSMUST00000021706 Ell2Q3UKU1 639 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Fam13aQ8BGI4 693 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Irgm2A0A140LIF8 407 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Zbtb21E9Q444 1094 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Soga3Q6NZL0 945 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Slc5a1Q8C3K6 665 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Ipo4Q8VI75 1082 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Kcnh5Q920E3 988 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Mcm3P25206 812 aaKnown RBP12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Fam193aQ8CGI1 1231 aaKnown RBP12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Catsper2A2ARP9 588 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Mcm4P49717 862 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Isy1Q69ZQ2 285 aaKnown RBP12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Mctp1E9PV86 951 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 EvcP57680 1005 aa12.25□□□□□ -0.45
Traf3-201ENSMUST00000021706 Rasa1E9PYG6 1038 aa12.24□□□□□ -0.45
Traf3-201ENSMUST00000021706 Dzip1Q8BMD2 852 aa12.24□□□□□ -0.45
Traf3-201ENSMUST00000021706 Pa2g4P50580 394 aaKnown RBP12.24□□□□□ -0.45
Traf3-201ENSMUST00000021706 Frmd3Q8BHD4 595 aa12.24□□□□□ -0.45
Traf3-201ENSMUST00000021706 Kri1Q8VDQ9 704 aaKnown RBP12.24□□□□□ -0.45
Traf3-201ENSMUST00000021706 Kif21bQ9QXL1 1668 aa12.24□□□□□ -0.45
Traf3-201ENSMUST00000021706 Pms1Q8K119 917 aa12.24□□□□□ -0.45
Traf3-201ENSMUST00000021706 TimelessQ9R1X4 1197 aa12.24□□□□□ -0.45
Traf3-201ENSMUST00000021706 Stk38Q91VJ4 465 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Eif3aP23116 1344 aaKnown RBP12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Myo3aQ8K3H5 1613 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Eya1P97767 591 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Tbc1d32Q3URV1 1296 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Evc2Q8K1G2 1220 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Farp2Q91VS8 1065 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Dnajc10Q9DC23 793 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Kiaa1107Q80TK0 1369 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Idi1P58044 227 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Polr3dQ91WD1 398 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 TnmdQ9EP64 317 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 PaskQ8CEE6 1383 aa12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Scaf11E9PZM7 1456 aaKnown RBP12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Tpm3P21107 285 aaKnown RBP12.23□□□□□ -0.45
Traf3-201ENSMUST00000021706 Ankrd50F7BE84 1390 aa12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 Sugp2Q8CH09 1067 aa12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 Nckap5lQ6GQX2 1323 aa12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 Irf9Q61179 399 aa12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 Odf2lQ9D478 642 aa12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 TbcaP48428 108 aaKnown RBP12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 Mapk8ip1Q9WVI9 707 aa12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 KdrP35918 1367 aa12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 Bag3Q9JLV1 577 aaKnown RBP12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 EappQ5BU09 281 aa12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 Eif3bQ8JZQ9 803 aaKnown RBP12.22□□□□□ -0.45
Traf3-201ENSMUST00000021706 Fam170aQ66LM6 333 aa12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 Cct2P80314 535 aaKnown RBP12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 Rbm27Q5SFM8 1060 aaKnown RBP12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 P2rx7Q9Z1M0 595 aa12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 Plekhd1B2RPU2 505 aa12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 Ercc3P49135 783 aa12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 Cct4P80315 539 aaKnown RBP12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 Nos1Q9Z0J4 1429 aa12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 Cep170Q6A065 1588 aa12.21□□□□□ -0.45
Traf3-201ENSMUST00000021706 Tpm2P58774 284 aa12.21□□□□□ -0.46
Traf3-201ENSMUST00000021706 Rnf17Q99MV7 1640 aa12.21□□□□□ -0.46
Traf3-201ENSMUST00000021706 Nol11Q8BJW5 723 aaKnown RBP12.21□□□□□ -0.46
Traf3-201ENSMUST00000021706 GptQ8QZR5 496 aa12.2□□□□□ -0.46
Traf3-201ENSMUST00000021706 Brd1E9PZ26 1189 aaKnown RBP12.2□□□□□ -0.46
Traf3-201ENSMUST00000021706 Hoxb7P09024 217 aa12.2□□□□□ -0.46
Traf3-201ENSMUST00000021706 Tnni2P13412 182 aa12.2□□□□□ -0.46
Traf3-201ENSMUST00000021706 Setbp1Q9Z180 1582 aa12.2□□□□□ -0.46
Traf3-201ENSMUST00000021706 Pik3r4Q8VD65 1358 aa12.2□□□□□ -0.46
Traf3-201ENSMUST00000021706 Hand2Q61039 217 aa12.2□□□□□ -0.46
Traf3-201ENSMUST00000021706 Ubxn4Q8VCH8 506 aa12.2□□□□□ -0.46
Traf3-201ENSMUST00000021706 Prpf4bQ61136 1007 aaKnown RBP12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Lmbr1lQ9D1E5 489 aa12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Usp19Q3UJD6 1360 aa12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Hmgn5Q9JL35 406 aa12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Golim4Q8BXA1 655 aa12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Nup88Q8CEC0 753 aaKnown RBP12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Bag4Q8CI61 457 aa12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Rapgef4Q9EQZ6 1011 aa12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Fsd2Q8BZ52 692 aa12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Krt85Q9Z2T6 507 aa12.19□□□□□ -0.46
Traf3-201ENSMUST00000021706 Trpm2Q91YD4 1506 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Trim34bJ3QNR8 485 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Ddx46Q569Z5 1032 aaKnown RBP12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Trim34aQ99PP6 485 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Setd1bQ8CFT2 1985 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Pdia3P27773 505 aaKnown RBP12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Dusp9Q7TNL7 452 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Synj2Q9D2G5 1434 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 Ccdc173A0JLY1 547 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 AidaQ8C4Q6 305 aa12.18□□□□□ -0.46
Traf3-201ENSMUST00000021706 PdcQ9QW08 244 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 83.1 ms