RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 CpzQ8R4V4 654 aa14.4□□□□□ -0.1
Tubb1-201ENSMUST00000016399 CoblQ5NBX1 1337 aaKnown RBP14.4□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Map4k4P97820 1233 aaKnown RBP14.39□□□□□ -0.11
Tubb1-201ENSMUST00000016399 HypkQ9CR41 129 aa14.38□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Spef2Q8C9J3 1734 aa14.37□□□□□ -0.11
Tubb1-201ENSMUST00000016399 TnikP83510 1323 aa14.37□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Stk31Q99MW1 1018 aa14.37□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Iqcf3Q9D498 203 aa14.37□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Hdac6Q9Z2V5 1149 aa14.37□□□□□ -0.11
Tubb1-201ENSMUST00000016399 ScaperF8VQ70 1398 aaKnown RBP14.36□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Znf541Q0GGX2 1363 aa14.36□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Esx1O88933 382 aa14.36□□□□□ -0.11
Tubb1-201ENSMUST00000016399 B4galnt4Q766D5 1034 aa14.36□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Golga2Q921M4 999 aa14.36□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Mcm10Q0VBD2 885 aa14.35□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Q4VA45 678 aa14.35□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Amotl1Q9D4H4 968 aa14.35□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Tlr8P58682 1032 aa14.34□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Miga2Q8BK03 593 aa14.34□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Slc5a1Q8C3K6 665 aa14.34□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Tns2Q8CGB6 1400 aa14.34□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Tcerg1Q8CGF7 1100 aaKnown RBP14.33□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Eif3bQ8JZQ9 803 aaKnown RBP14.33□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Pde3aQ9Z0X4 1141 aa14.33□□□□□ -0.11
Tubb1-201ENSMUST00000016399 Mapk8ip3Q9ESN9 1337 aa14.33□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Casz1Q9CWL2 1761 aa14.33□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Apaf1O88879 1249 aa14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 NogP97466 232 aa14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Spata31d1bE9QA57 1361 aa14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Mex3cQ05A36 652 aaKnown RBP14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 1810065E05RikQ5NC41 235 aa14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 TmpoQ61033 693 aaKnown RBP14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Ncbp3Q8BZR9 615 aaKnown RBP14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Plin1Q8CGN5 517 aa14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Upf1Q9EPU0 1124 aaKnown RBP14.32□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Uspl1Q3ULM6 1089 aa14.31□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Gja3Q64448 417 aa14.31□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Mak16Q8BGS0 296 aaKnown RBP14.31□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.3□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Crb1Q8VHS2 1405 aa14.3□□□□□ -0.12
Tubb1-201ENSMUST00000016399 RtcbQ99LF4 505 aaKnown RBP14.3□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Atg3Q9CPX6 314 aa14.3□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Cabp2Q9JLK4 216 aa14.3□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Cavin4A2AMM0 362 aa14.29□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Nedd4P46935 887 aaKnown RBP14.29□□□□□ -0.12
Tubb1-201ENSMUST00000016399 PgfP49764 158 aa14.29□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Ppp1r1bQ60829 194 aa14.29□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Jmjd4Q8BFT6 427 aa14.29□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Ints5Q8CHT3 1018 aa14.29□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Usp19Q3UJD6 1360 aa14.29□□□□□ -0.12
Tubb1-201ENSMUST00000016399 WasP70315 520 aa14.28□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Asic4Q7TNS7 539 aa14.28□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Klhdc4Q921I2 584 aa14.28□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Msh6P54276 1358 aaKnown RBP14.28□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Megf6Q80V70 1572 aa14.28□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Cfap70D3YVL2 1141 aa14.27□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Stxbp5lQ5DQR4 1185 aa14.27□□□□□ -0.12
Tubb1-201ENSMUST00000016399 Aox2Q5SGK3 1345 aa14.27□□□□□ -0.13
Tubb1-201ENSMUST00000016399 UtrnE9Q6R7 3430 aa14.26□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Dcaf5Q80T85 946 aa14.26□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Ssfa2Q922B9 1252 aa14.26□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Cap2Q9CYT6 476 aa14.26□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Phkg2Q9DB30 406 aa14.26□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Plch1Q4KWH5 1682 aa14.26□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Trpm3Q5F4S9 1721 aa14.26□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Klrk1O54709 232 aa14.25□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Pdzd9Q9D9M4 266 aa14.25□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Swt1Q9DBQ9 907 aa14.25□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Uhrf1bp1B2KF50 1429 aa14.25□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Dusp27Q148W8 1138 aa14.24□□□□□ -0.13
Tubb1-201ENSMUST00000016399 PappaQ8R4K8 1624 aa14.24□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Col11a2Q64739 1736 aa14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Itgb4A2A863 1818 aa14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Rtf1A2AQ19 715 aaKnown RBP14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Slurp2P0DP59 97 aa14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Stra8P70278 393 aa14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 EgfrQ01279 1210 aa14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 SobpQ0P5V2 864 aa14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Amhr2Q8K592 568 aa14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Chmp7Q8R1T1 451 aa14.23□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Abcc12Q80WJ6 1366 aa14.22□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Nkx1-1G3UXB3 402 aa14.22□□□□□ -0.13
Tubb1-201ENSMUST00000016399 IarsQ8BU30 1262 aa14.22□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Pik3ap1Q9EQ32 811 aa14.22□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Sos1Q62245 1319 aa14.21□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Smg7Q5RJH6 1138 aaKnown RBP14.21□□□□□ -0.13
Tubb1-201ENSMUST00000016399 Srp68Q8BMA6 625 aaKnown RBP14.21□□□□□ -0.13
Tubb1-201ENSMUST00000016399 XpcP51612 930 aa14.2□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Ralbp1Q62172 648 aa14.2□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Slfnl1Q8BHW9 410 aa14.2□□□□□ -0.14
Tubb1-201ENSMUST00000016399 CrbnQ8C7D2 445 aa14.2□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Snap23O09044 210 aa14.19□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Wdhd1P59328 1117 aa14.19□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Rbm46P86049 533 aa14.19□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Ubr3Q5U430 1889 aa14.18□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Nop58Q6DFW4 536 aaKnown RBP14.18□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Gjd4Q8BSD4 364 aa14.18□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Znf428Q8C1M2 176 aa14.18□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Speer4f1Q9D5Q6 258 aa14.18□□□□□ -0.14
Tubb1-201ENSMUST00000016399 Tjp1P39447 1745 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 94.2 ms