Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Gm25239-201ENSMUST00000174915 86 ntBASIC35.14■■■■□ 3.22
Tdp2Q9JJX7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Tdp2Q9JJX7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Tdp2Q9JJX7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.11■■■□□ 2.89
Tdp2Q9JJX7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Tdp2Q9JJX7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Tdp2Q9JJX7 Psd-208ENSMUST00000224556 2034 ntBASIC32.12■■■□□ 2.73
Tdp2Q9JJX7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tdp2Q9JJX7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Tdp2Q9JJX7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Tdp2Q9JJX7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tdp2Q9JJX7 Gm15042-201ENSMUST00000120212 883 ntBASIC30.92■■■□□ 2.54
Tdp2Q9JJX7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Tdp2Q9JJX7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Tdp2Q9JJX7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Tdp2Q9JJX7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Tdp2Q9JJX7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.63■■■□□ 2.49
Tdp2Q9JJX7 Gm24109-201ENSMUST00000175489 103 ntBASIC30.52■■■□□ 2.48
Tdp2Q9JJX7 Gm15045-201ENSMUST00000117359 883 ntBASIC30.43■■■□□ 2.46
Tdp2Q9JJX7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Tdp2Q9JJX7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Tdp2Q9JJX7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Tdp2Q9JJX7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Tdp2Q9JJX7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Tdp2Q9JJX7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Tdp2Q9JJX7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Tdp2Q9JJX7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tdp2Q9JJX7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.72■■■□□ 2.35
Tdp2Q9JJX7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Tdp2Q9JJX7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Tdp2Q9JJX7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
Tdp2Q9JJX7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Tdp2Q9JJX7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Tdp2Q9JJX7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Tdp2Q9JJX7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Tdp2Q9JJX7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.54■■■□□ 2.32
Tdp2Q9JJX7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Tdp2Q9JJX7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Tdp2Q9JJX7 Gm23366-201ENSMUST00000175022 89 ntBASIC29.38■■■□□ 2.29
Tdp2Q9JJX7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.36■■■□□ 2.29
Tdp2Q9JJX7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tdp2Q9JJX7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Tdp2Q9JJX7 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.08■■■□□ 2.25
Tdp2Q9JJX7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tdp2Q9JJX7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Tdp2Q9JJX7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29■■■□□ 2.23
Tdp2Q9JJX7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Tdp2Q9JJX7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.76■■■□□ 2.19
Tdp2Q9JJX7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Tdp2Q9JJX7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Tdp2Q9JJX7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Tdp2Q9JJX7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tdp2Q9JJX7 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.55■■■□□ 2.16
Tdp2Q9JJX7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.52■■■□□ 2.16
Tdp2Q9JJX7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Tdp2Q9JJX7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tdp2Q9JJX7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tdp2Q9JJX7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tdp2Q9JJX7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Tdp2Q9JJX7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tdp2Q9JJX7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tdp2Q9JJX7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Tdp2Q9JJX7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Tdp2Q9JJX7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
Tdp2Q9JJX7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.28■■■□□ 2.12
Tdp2Q9JJX7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.26■■■□□ 2.11
Tdp2Q9JJX7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tdp2Q9JJX7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tdp2Q9JJX7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tdp2Q9JJX7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Tdp2Q9JJX7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Tdp2Q9JJX7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tdp2Q9JJX7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tdp2Q9JJX7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Tdp2Q9JJX7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Tdp2Q9JJX7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Tdp2Q9JJX7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Tdp2Q9JJX7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.88■■■□□ 2.05
Tdp2Q9JJX7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
Tdp2Q9JJX7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Tdp2Q9JJX7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Tdp2Q9JJX7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
Tdp2Q9JJX7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tdp2Q9JJX7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tdp2Q9JJX7 Gm25238-201ENSMUST00000174914 89 ntBASIC27.76■■■□□ 2.03
Tdp2Q9JJX7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Tdp2Q9JJX7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.68■■■□□ 2.02
Tdp2Q9JJX7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Tdp2Q9JJX7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Tdp2Q9JJX7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Tdp2Q9JJX7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Tdp2Q9JJX7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Tdp2Q9JJX7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.46■■□□□ 1.99
Tdp2Q9JJX7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Tdp2Q9JJX7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Tdp2Q9JJX7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Tdp2Q9JJX7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Tdp2Q9JJX7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Tdp2Q9JJX7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Tdp2Q9JJX7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms