Protein–RNA interactions for Protein: Q8CAE3

Kcnmb1, Calcium-activated potassium channel subunit beta-1, mousemouse

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnmb1Q8CAE3 Gm25239-201ENSMUST00000174915 86 ntBASIC32.98■■■□□ 2.87
Kcnmb1Q8CAE3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Kcnmb1Q8CAE3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Kcnmb1Q8CAE3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
Kcnmb1Q8CAE3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Kcnmb1Q8CAE3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Kcnmb1Q8CAE3 Psd-208ENSMUST00000224556 2034 ntBASIC29.66■■■□□ 2.34
Kcnmb1Q8CAE3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Kcnmb1Q8CAE3 Gm15042-201ENSMUST00000120212 883 ntBASIC29.42■■■□□ 2.3
Kcnmb1Q8CAE3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.24
Kcnmb1Q8CAE3 Gm15045-201ENSMUST00000117359 883 ntBASIC28.89■■■□□ 2.22
Kcnmb1Q8CAE3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Kcnmb1Q8CAE3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Kcnmb1Q8CAE3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.72■■■□□ 2.19
Kcnmb1Q8CAE3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Kcnmb1Q8CAE3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Kcnmb1Q8CAE3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Kcnmb1Q8CAE3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kcnmb1Q8CAE3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Kcnmb1Q8CAE3 Gm24109-201ENSMUST00000175489 103 ntBASIC28.29■■■□□ 2.12
Kcnmb1Q8CAE3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Kcnmb1Q8CAE3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Kcnmb1Q8CAE3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Kcnmb1Q8CAE3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Kcnmb1Q8CAE3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Kcnmb1Q8CAE3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Kcnmb1Q8CAE3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.88■■■□□ 2.05
Kcnmb1Q8CAE3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Kcnmb1Q8CAE3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kcnmb1Q8CAE3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.67■■■□□ 2.02
Kcnmb1Q8CAE3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Kcnmb1Q8CAE3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Kcnmb1Q8CAE3 Gm23366-201ENSMUST00000175022 89 ntBASIC27.62■■■□□ 2.01
Kcnmb1Q8CAE3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Kcnmb1Q8CAE3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Kcnmb1Q8CAE3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Kcnmb1Q8CAE3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Kcnmb1Q8CAE3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Kcnmb1Q8CAE3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Kcnmb1Q8CAE3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Kcnmb1Q8CAE3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.21■■□□□ 1.95
Kcnmb1Q8CAE3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Kcnmb1Q8CAE3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.15■■□□□ 1.94
Kcnmb1Q8CAE3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Kcnmb1Q8CAE3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.07■■□□□ 1.92
Kcnmb1Q8CAE3 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.06■■□□□ 1.92
Kcnmb1Q8CAE3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Kcnmb1Q8CAE3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Kcnmb1Q8CAE3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Kcnmb1Q8CAE3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Kcnmb1Q8CAE3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Kcnmb1Q8CAE3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Kcnmb1Q8CAE3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.59■■□□□ 1.85
Kcnmb1Q8CAE3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Kcnmb1Q8CAE3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Kcnmb1Q8CAE3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.45■■□□□ 1.82
Kcnmb1Q8CAE3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Kcnmb1Q8CAE3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Kcnmb1Q8CAE3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Kcnmb1Q8CAE3 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.31■■□□□ 1.8
Kcnmb1Q8CAE3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kcnmb1Q8CAE3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kcnmb1Q8CAE3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kcnmb1Q8CAE3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Kcnmb1Q8CAE3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Kcnmb1Q8CAE3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Kcnmb1Q8CAE3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Kcnmb1Q8CAE3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.13■■□□□ 1.77
Kcnmb1Q8CAE3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Kcnmb1Q8CAE3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Kcnmb1Q8CAE3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Kcnmb1Q8CAE3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Kcnmb1Q8CAE3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Kcnmb1Q8CAE3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Kcnmb1Q8CAE3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Kcnmb1Q8CAE3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.01■■□□□ 1.75
Kcnmb1Q8CAE3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Kcnmb1Q8CAE3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Kcnmb1Q8CAE3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Kcnmb1Q8CAE3 Gm27325-201ENSMUST00000175467 74 ntBASIC25.91■■□□□ 1.74
Kcnmb1Q8CAE3 Gm25238-201ENSMUST00000174914 89 ntBASIC25.84■■□□□ 1.73
Kcnmb1Q8CAE3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Kcnmb1Q8CAE3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Kcnmb1Q8CAE3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
Kcnmb1Q8CAE3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.72■■□□□ 1.71
Kcnmb1Q8CAE3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Kcnmb1Q8CAE3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Kcnmb1Q8CAE3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Kcnmb1Q8CAE3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Kcnmb1Q8CAE3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Kcnmb1Q8CAE3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Kcnmb1Q8CAE3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Kcnmb1Q8CAE3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.63■■□□□ 1.69
Kcnmb1Q8CAE3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Kcnmb1Q8CAE3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Kcnmb1Q8CAE3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Kcnmb1Q8CAE3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Kcnmb1Q8CAE3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Kcnmb1Q8CAE3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Kcnmb1Q8CAE3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms