Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Gm25239-201ENSMUST00000174915 86 ntBASIC31.26■■■□□ 2.59
TpbpaP13438 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TpbpaP13438 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TpbpaP13438 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
TpbpaP13438 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TpbpaP13438 Psd-208ENSMUST00000224556 2034 ntBASIC28.5■■■□□ 2.15
TpbpaP13438 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TpbpaP13438 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TpbpaP13438 Gm15042-201ENSMUST00000120212 883 ntBASIC28.02■■■□□ 2.08
TpbpaP13438 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
TpbpaP13438 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
TpbpaP13438 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
TpbpaP13438 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TpbpaP13438 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.47■■□□□ 1.99
TpbpaP13438 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TpbpaP13438 Gm15045-201ENSMUST00000117359 883 ntBASIC27.44■■□□□ 1.98
TpbpaP13438 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TpbpaP13438 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TpbpaP13438 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
TpbpaP13438 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TpbpaP13438 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
TpbpaP13438 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TpbpaP13438 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
TpbpaP13438 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
TpbpaP13438 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TpbpaP13438 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
TpbpaP13438 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
TpbpaP13438 Gm24109-201ENSMUST00000175489 103 ntBASIC26.7■■□□□ 1.86
TpbpaP13438 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TpbpaP13438 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TpbpaP13438 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.6■■□□□ 1.85
TpbpaP13438 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TpbpaP13438 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TpbpaP13438 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.49■■□□□ 1.83
TpbpaP13438 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TpbpaP13438 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TpbpaP13438 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TpbpaP13438 Gm23366-201ENSMUST00000175022 89 ntBASIC26.25■■□□□ 1.79
TpbpaP13438 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TpbpaP13438 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TpbpaP13438 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
TpbpaP13438 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.13■■□□□ 1.77
TpbpaP13438 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TpbpaP13438 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TpbpaP13438 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.04■■□□□ 1.76
TpbpaP13438 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.03■■□□□ 1.76
TpbpaP13438 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TpbpaP13438 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TpbpaP13438 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TpbpaP13438 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
TpbpaP13438 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TpbpaP13438 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.79■■□□□ 1.72
TpbpaP13438 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TpbpaP13438 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
TpbpaP13438 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.64■■□□□ 1.7
TpbpaP13438 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TpbpaP13438 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
TpbpaP13438 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
TpbpaP13438 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TpbpaP13438 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TpbpaP13438 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.39■■□□□ 1.66
TpbpaP13438 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
TpbpaP13438 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TpbpaP13438 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.25■■□□□ 1.63
TpbpaP13438 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TpbpaP13438 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TpbpaP13438 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TpbpaP13438 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
TpbpaP13438 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TpbpaP13438 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TpbpaP13438 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TpbpaP13438 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TpbpaP13438 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TpbpaP13438 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
TpbpaP13438 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
TpbpaP13438 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TpbpaP13438 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
TpbpaP13438 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TpbpaP13438 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TpbpaP13438 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TpbpaP13438 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TpbpaP13438 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.84■■□□□ 1.57
TpbpaP13438 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TpbpaP13438 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TpbpaP13438 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TpbpaP13438 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TpbpaP13438 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TpbpaP13438 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.68■■□□□ 1.54
TpbpaP13438 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TpbpaP13438 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TpbpaP13438 Gm27325-201ENSMUST00000175467 74 ntBASIC24.64■■□□□ 1.54
TpbpaP13438 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TpbpaP13438 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TpbpaP13438 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
TpbpaP13438 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.52
TpbpaP13438 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TpbpaP13438 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TpbpaP13438 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TpbpaP13438 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
TpbpaP13438 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms