Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNU6-959P-201ENST00000384671 107 ntBASIC-5.14□□□□□ -3.23
HLA-DRB4X5D2U9 SNORD30.1-201ENST00000391309 70 ntBASIC-5.15□□□□□ -3.23
HLA-DRB4X5D2U9 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.16□□□□□ -3.24
HLA-DRB4X5D2U9 RNU6-627P-201ENST00000364032 102 ntBASIC-5.16□□□□□ -3.24
HLA-DRB4X5D2U9 U7.4-201ENST00000614961 63 ntBASIC-5.17□□□□□ -3.24
HLA-DRB4X5D2U9 RNU6-32P-201ENST00000383948 107 ntBASIC-5.18□□□□□ -3.24
HLA-DRB4X5D2U9 RNU6-13P-201ENST00000384248 107 ntBASIC-5.18□□□□□ -3.24
HLA-DRB4X5D2U9 RNU6-12P-201ENST00000384604 107 ntBASIC-5.18□□□□□ -3.24
HLA-DRB4X5D2U9 RNU6-41P-201ENST00000384741 107 ntBASIC-5.18□□□□□ -3.24
HLA-DRB4X5D2U9 AL365222.1-201ENST00000614661 98 ntBASIC-5.18□□□□□ -3.24
HLA-DRB4X5D2U9 AC090425.1-201ENST00000610007 140 ntBASIC-5.23□□□□□ -3.25
HLA-DRB4X5D2U9 RNU6-242P-201ENST00000384359 107 ntBASIC-5.25□□□□□ -3.25
HLA-DRB4X5D2U9 RNU6-59P-201ENST00000384787 107 ntBASIC-5.26□□□□□ -3.25
HLA-DRB4X5D2U9 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.27□□□□□ -3.25
HLA-DRB4X5D2U9 MIR4679-1-201ENST00000637619 75 ntBASIC-5.27□□□□□ -3.25
HLA-DRB4X5D2U9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-5.28□□□□□ -3.25
HLA-DRB4X5D2U9 MIR4666B-201ENST00000578142 81 ntBASIC-5.29□□□□□ -3.26
HLA-DRB4X5D2U9 U6.111-201ENST00000636093 83 ntBASIC-5.3□□□□□ -3.26
HLA-DRB4X5D2U9 RNU6-871P-201ENST00000516122 100 ntBASIC-5.31□□□□□ -3.26
HLA-DRB4X5D2U9 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.32□□□□□ -3.26
HLA-DRB4X5D2U9 RNU6-1131P-201ENST00000364955 107 ntBASIC-5.32□□□□□ -3.26
HLA-DRB4X5D2U9 RNU6-1276P-201ENST00000365372 104 ntBASIC-5.32□□□□□ -3.26
HLA-DRB4X5D2U9 RNU4-33P-201ENST00000364316 85 ntBASIC-5.33□□□□□ -3.26
HLA-DRB4X5D2U9 RNU6-49P-201ENST00000384256 107 ntBASIC-5.34□□□□□ -3.26
HLA-DRB4X5D2U9 Y_RNA.703-201ENST00000516846 111 ntBASIC-5.34□□□□□ -3.26
HLA-DRB4X5D2U9 SNORD113-1-201ENST00000365321 69 ntBASIC-5.35□□□□□ -3.27
HLA-DRB4X5D2U9 RNU6-539P-201ENST00000516665 103 ntBASIC-5.35□□□□□ -3.27
HLA-DRB4X5D2U9 RNU6-620P-201ENST00000384017 96 ntBASIC-5.37□□□□□ -3.27
HLA-DRB4X5D2U9 RNU6-1168P-201ENST00000390831 104 ntBASIC-5.37□□□□□ -3.27
HLA-DRB4X5D2U9 MIR3133-201ENST00000583157 78 ntBASIC-5.39□□□□□ -3.27
HLA-DRB4X5D2U9 AC110620.1-201ENST00000416042 228 ntBASIC-5.4□□□□□ -3.27
HLA-DRB4X5D2U9 RNU6-209P-201ENST00000384118 107 ntBASIC-5.41□□□□□ -3.28
HLA-DRB4X5D2U9 MIR494-201ENST00000349529 81 ntBASIC-5.42□□□□□ -3.28
HLA-DRB4X5D2U9 RNU6-986P-201ENST00000363133 102 ntBASIC-5.43□□□□□ -3.28
HLA-DRB4X5D2U9 RNU6-81P-201ENST00000365608 104 ntBASIC-5.43□□□□□ -3.28
HLA-DRB4X5D2U9 RNU6-446P-201ENST00000362827 106 ntBASIC-5.44□□□□□ -3.28
HLA-DRB4X5D2U9 RNU6-147P-201ENST00000383983 107 ntBASIC-5.44□□□□□ -3.28
HLA-DRB4X5D2U9 RNU6-787P-201ENST00000384032 107 ntBASIC-5.48□□□□□ -3.29
HLA-DRB4X5D2U9 RNU6-22P-201ENST00000384355 107 ntBASIC-5.48□□□□□ -3.29
HLA-DRB4X5D2U9 RNU6-1011P-201ENST00000384668 107 ntBASIC-5.5□□□□□ -3.29
HLA-DRB4X5D2U9 RNU6-838P-201ENST00000363399 108 ntBASIC-5.52□□□□□ -3.29
HLA-DRB4X5D2U9 MIR450A2-201ENST00000385022 100 ntBASIC-5.52□□□□□ -3.29
HLA-DRB4X5D2U9 RNU6-1154P-201ENST00000391001 104 ntBASIC-5.52□□□□□ -3.29
HLA-DRB4X5D2U9 SNORD113-4-201ENST00000364802 75 ntBASIC-5.53□□□□□ -3.29
HLA-DRB4X5D2U9 Y_RNA.379-201ENST00000365653 102 ntBASIC-5.54□□□□□ -3.3
HLA-DRB4X5D2U9 AC114801.3-201ENST00000510231 177 ntBASIC-5.54□□□□□ -3.3
HLA-DRB4X5D2U9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-5.54□□□□□ -3.3
HLA-DRB4X5D2U9 RNU6-1117P-201ENST00000384525 104 ntBASIC-5.56□□□□□ -3.3
HLA-DRB4X5D2U9 RNU6-313P-201ENST00000516317 112 ntBASIC-5.56□□□□□ -3.3
HLA-DRB4X5D2U9 RNU6-294P-201ENST00000364999 102 ntBASIC-5.68□□□□□ -3.32
HLA-DRB4X5D2U9 RNY4P30-201ENST00000410216 95 ntBASIC-5.7□□□□□ -3.32
HLA-DRB4X5D2U9 RNA5SP89-201ENST00000410300 108 ntBASIC-5.72□□□□□ -3.33
HLA-DRB4X5D2U9 RNU6-820P-201ENST00000384273 107 ntBASIC-5.74□□□□□ -3.33
HLA-DRB4X5D2U9 RNU6-406P-201ENST00000516470 107 ntBASIC-5.75□□□□□ -3.33
HLA-DRB4X5D2U9 AP001094.1-201ENST00000579805 193 ntBASIC-5.76□□□□□ -3.33
HLA-DRB4X5D2U9 RNU6-1091P-201ENST00000363945 107 ntBASIC-5.8□□□□□ -3.34
HLA-DRB4X5D2U9 RNU6-153P-201ENST00000364422 104 ntBASIC-5.8□□□□□ -3.34
HLA-DRB4X5D2U9 RNU6-471P-201ENST00000383944 106 ntBASIC-5.81□□□□□ -3.34
HLA-DRB4X5D2U9 SNORD111B-201ENST00000408587 80 ntBASIC-5.82□□□□□ -3.34
HLA-DRB4X5D2U9 RNU6-919P-201ENST00000516731 104 ntBASIC-5.84□□□□□ -3.34
HLA-DRB4X5D2U9 MIR3202-2-201ENST00000635980 79 ntBASIC-5.85□□□□□ -3.35
HLA-DRB4X5D2U9 Y_RNA.386-201ENST00000383913 105 ntBASIC-5.87□□□□□ -3.35
HLA-DRB4X5D2U9 RNU6-857P-201ENST00000515893 110 ntBASIC-5.87□□□□□ -3.35
HLA-DRB4X5D2U9 RNU6-829P-201ENST00000363700 112 ntBASIC-5.89□□□□□ -3.35
HLA-DRB4X5D2U9 RNY4P19-201ENST00000362530 96 ntBASIC-5.9□□□□□ -3.35
HLA-DRB4X5D2U9 RNU6-215P-201ENST00000365169 102 ntBASIC-5.9□□□□□ -3.35
HLA-DRB4X5D2U9 MIR548F3-201ENST00000408509 87 ntBASIC-5.91□□□□□ -3.36
HLA-DRB4X5D2U9 RNU6-794P-201ENST00000517261 64 ntBASIC-5.94□□□□□ -3.36
HLA-DRB4X5D2U9 RNU6-279P-201ENST00000391297 101 ntBASIC-5.95□□□□□ -3.36
HLA-DRB4X5D2U9 SNORD20-201ENST00000384550 80 ntBASIC-5.96□□□□□ -3.36
HLA-DRB4X5D2U9 RNU6-485P-201ENST00000363475 107 ntBASIC-5.97□□□□□ -3.37
HLA-DRB4X5D2U9 Y_RNA.81-201ENST00000362997 102 ntBASIC-5.98□□□□□ -3.37
HLA-DRB4X5D2U9 Y_RNA.694-201ENST00000516677 117 ntBASIC-5.98□□□□□ -3.37
HLA-DRB4X5D2U9 RNU6-753P-201ENST00000363926 107 ntBASIC-6□□□□□ -3.37
HLA-DRB4X5D2U9 RNU6-930P-201ENST00000390938 100 ntBASIC-6□□□□□ -3.37
HLA-DRB4X5D2U9 RNU6-894P-201ENST00000517094 105 ntBASIC-6□□□□□ -3.37
HLA-DRB4X5D2U9 MIR633-201ENST00000384821 98 ntBASIC-6.03□□□□□ -3.37
HLA-DRB4X5D2U9 MIR1255A-201ENST00000408338 113 ntBASIC-6.04□□□□□ -3.38
HLA-DRB4X5D2U9 SNORA26.2-201ENST00000390922 122 ntBASIC-6.07□□□□□ -3.38
HLA-DRB4X5D2U9 RNU6-44P-201ENST00000384045 107 ntBASIC-6.08□□□□□ -3.38
HLA-DRB4X5D2U9 Y_RNA.369-201ENST00000365568 117 ntBASIC-6.13□□□□□ -3.39
HLA-DRB4X5D2U9 MIR548M-201ENST00000408260 86 ntBASIC-6.16□□□□□ -3.4
HLA-DRB4X5D2U9 MIR5582-201ENST00000579697 68 ntBASIC-6.17□□□□□ -3.4
HLA-DRB4X5D2U9 RNU6-1275P-201ENST00000391087 107 ntBASIC-6.18□□□□□ -3.4
HLA-DRB4X5D2U9 RNU6-892P-201ENST00000410335 99 ntBASIC-6.2□□□□□ -3.4
HLA-DRB4X5D2U9 MIR3910-1-201ENST00000580936 111 ntBASIC-6.21□□□□□ -3.4
HLA-DRB4X5D2U9 MIR4662A-201ENST00000637499 67 ntBASIC-6.21□□□□□ -3.4
HLA-DRB4X5D2U9 RNU6-573P-201ENST00000383938 106 ntBASIC-6.23□□□□□ -3.41
HLA-DRB4X5D2U9 AC079150.2-201ENST00000443733 78 ntBASIC-6.25□□□□□ -3.41
HLA-DRB4X5D2U9 RNU6-936P-201ENST00000384005 107 ntBASIC-6.31□□□□□ -3.42
HLA-DRB4X5D2U9 RNA5SP225-201ENST00000410874 135 ntBASIC-6.33□□□□□ -3.42
HLA-DRB4X5D2U9 U6.103-201ENST00000637085 61 ntBASIC-6.34□□□□□ -3.42
HLA-DRB4X5D2U9 SNORD78.1-201ENST00000390866 65 ntBASIC-6.38□□□□□ -3.43
HLA-DRB4X5D2U9 DLEU2_4.2-201ENST00000616613 58 ntBASIC-6.38□□□□□ -3.43
HLA-DRB4X5D2U9 AL606753.1-201ENST00000427435 87 ntBASIC-6.4□□□□□ -3.43
HLA-DRB4X5D2U9 SNORD73B-201ENST00000364394 72 ntBASIC-6.41□□□□□ -3.44
HLA-DRB4X5D2U9 AC099654.10-201ENST00000640395 161 ntBASIC-6.41□□□□□ -3.44
HLA-DRB4X5D2U9 RNY4P29-201ENST00000410801 97 ntBASIC-6.44□□□□□ -3.44
HLA-DRB4X5D2U9 Y_RNA.388-201ENST00000383919 113 ntBASIC-6.51□□□□□ -3.45
HLA-DRB4X5D2U9 RNU6-133P-201ENST00000383989 107 ntBASIC-6.54□□□□□ -3.46
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms