Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MIR4666B-201ENST00000578142 81 ntBASIC-1.58□□□□□ -2.66
COL1A1P02452 RNY1P5-201ENST00000383890 115 ntBASIC-1.59□□□□□ -2.66
COL1A1P02452 MIR3133-201ENST00000583157 78 ntBASIC-1.59□□□□□ -2.66
COL1A1P02452 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.6□□□□□ -2.67
COL1A1P02452 RNY4P30-201ENST00000410216 95 ntBASIC-1.6□□□□□ -2.67
COL1A1P02452 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.6□□□□□ -2.67
COL1A1P02452 AC103706.3-201ENST00000636297 85 ntBASIC-1.6□□□□□ -2.67
COL1A1P02452 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.61□□□□□ -2.67
COL1A1P02452 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-32P-201ENST00000383948 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-13P-201ENST00000384248 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-12P-201ENST00000384604 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-41P-201ENST00000384741 107 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 AC008267.6-201ENST00000441664 139 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.62□□□□□ -2.67
COL1A1P02452 RNU6-242P-201ENST00000384359 107 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 RNU6-808P-201ENST00000391233 108 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 MIR633-201ENST00000384821 98 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.63□□□□□ -2.67
COL1A1P02452 RNU6-294P-201ENST00000364999 102 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNU6-81P-201ENST00000365608 104 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNU6-463P-201ENST00000384340 107 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNA5SP89-201ENST00000410300 108 ntBASIC-1.64□□□□□ -2.67
COL1A1P02452 RNU6-829P-201ENST00000363700 112 ntBASIC-1.65□□□□□ -2.67
COL1A1P02452 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.65□□□□□ -2.67
COL1A1P02452 RNU6-59P-201ENST00000384787 107 ntBASIC-1.65□□□□□ -2.67
COL1A1P02452 RNU6-539P-201ENST00000516665 103 ntBASIC-1.65□□□□□ -2.67
COL1A1P02452 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.66□□□□□ -2.68
COL1A1P02452 AC114801.3-201ENST00000510231 177 ntBASIC-1.66□□□□□ -2.68
COL1A1P02452 Y_RNA.165-201ENST00000363721 102 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 RNU6-573P-201ENST00000383938 106 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 RNU6-22P-201ENST00000384355 107 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 MIR450A2-201ENST00000385022 100 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 MIR1255A-201ENST00000408338 113 ntBASIC-1.67□□□□□ -2.68
COL1A1P02452 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.68□□□□□ -2.68
COL1A1P02452 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.68□□□□□ -2.68
COL1A1P02452 RNU6-871P-201ENST00000516122 100 ntBASIC-1.69□□□□□ -2.68
COL1A1P02452 RNU6-406P-201ENST00000516470 107 ntBASIC-1.69□□□□□ -2.68
COL1A1P02452 SNORD20-201ENST00000384550 80 ntBASIC-1.7□□□□□ -2.68
COL1A1P02452 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.7□□□□□ -2.68
COL1A1P02452 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 RNU6-838P-201ENST00000363399 108 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 RNU4-85P-201ENST00000364675 123 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 RNU6-44P-201ENST00000384045 107 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 RNU6-857P-201ENST00000515893 110 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 AC090425.1-201ENST00000610007 140 ntBASIC-1.71□□□□□ -2.68
COL1A1P02452 MT-TG-201ENST00000387429 68 ntBASIC-1.72□□□□□ -2.68
COL1A1P02452 RNA5SP225-201ENST00000410874 135 ntBASIC-1.72□□□□□ -2.68
COL1A1P02452 MIR4679-1-201ENST00000637619 75 ntBASIC-1.73□□□□□ -2.69
COL1A1P02452 RNU6-753P-201ENST00000363926 107 ntBASIC-1.74□□□□□ -2.69
COL1A1P02452 MIR363-201ENST00000384840 75 ntBASIC-1.75□□□□□ -2.69
COL1A1P02452 RNU6-471P-201ENST00000383944 106 ntBASIC-1.75□□□□□ -2.69
COL1A1P02452 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.75□□□□□ -2.69
COL1A1P02452 RNU6-313P-201ENST00000516317 112 ntBASIC-1.75□□□□□ -2.69
COL1A1P02452 SNORD113-1-201ENST00000365321 69 ntBASIC-1.76□□□□□ -2.69
COL1A1P02452 RNU6-820P-201ENST00000384273 107 ntBASIC-1.76□□□□□ -2.69
COL1A1P02452 MIR5582-201ENST00000579697 68 ntBASIC-1.76□□□□□ -2.69
COL1A1P02452 RNU6-620P-201ENST00000384017 96 ntBASIC-1.77□□□□□ -2.69
COL1A1P02452 SNORD111B-201ENST00000408587 80 ntBASIC-1.77□□□□□ -2.69
COL1A1P02452 RNU6-215P-201ENST00000365169 102 ntBASIC-1.78□□□□□ -2.69
COL1A1P02452 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.78□□□□□ -2.69
COL1A1P02452 MIR548F3-201ENST00000408509 87 ntBASIC-1.79□□□□□ -2.7
COL1A1P02452 RNU6-936P-201ENST00000384005 107 ntBASIC-1.8□□□□□ -2.7
COL1A1P02452 RNU6-279P-201ENST00000391297 101 ntBASIC-1.8□□□□□ -2.7
COL1A1P02452 RNU6-919P-201ENST00000516731 104 ntBASIC-1.8□□□□□ -2.7
COL1A1P02452 SNORD73B-201ENST00000364394 72 ntBASIC-1.81□□□□□ -2.7
COL1A1P02452 SNORA26.2-201ENST00000390922 122 ntBASIC-1.81□□□□□ -2.7
COL1A1P02452 RNU6-627P-201ENST00000364032 102 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 RNU6-930P-201ENST00000390938 100 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 RNU6-153P-201ENST00000364422 104 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 AC079150.2-201ENST00000443733 78 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 MIR3202-2-201ENST00000635980 79 ntBASIC-1.82□□□□□ -2.7
COL1A1P02452 RNU6-916P-201ENST00000516088 109 ntBASIC-1.83□□□□□ -2.7
COL1A1P02452 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.85□□□□□ -2.71
COL1A1P02452 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.85□□□□□ -2.71
COL1A1P02452 RNY4P29-201ENST00000410801 97 ntBASIC-1.85□□□□□ -2.71
COL1A1P02452 AL606753.1-201ENST00000427435 87 ntBASIC-1.85□□□□□ -2.71
COL1A1P02452 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.86□□□□□ -2.71
COL1A1P02452 SNORD78.1-201ENST00000390866 65 ntBASIC-1.86□□□□□ -2.71
COL1A1P02452 MIR3910-1-201ENST00000580936 111 ntBASIC-1.88□□□□□ -2.71
COL1A1P02452 RNU6-485P-201ENST00000363475 107 ntBASIC-1.88□□□□□ -2.71
COL1A1P02452 AP001094.1-201ENST00000579805 193 ntBASIC-1.88□□□□□ -2.71
COL1A1P02452 MIR4662A-201ENST00000637499 67 ntBASIC-1.88□□□□□ -2.71
COL1A1P02452 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.89□□□□□ -2.71
COL1A1P02452 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.9□□□□□ -2.71
COL1A1P02452 MT-TR-201ENST00000387439 65 ntBASIC-1.9□□□□□ -2.71
COL1A1P02452 AC099654.10-201ENST00000640395 161 ntBASIC-1.9□□□□□ -2.71
COL1A1P02452 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
COL1A1P02452 MIR548M-201ENST00000408260 86 ntBASIC-1.92□□□□□ -2.72
COL1A1P02452 RNU6-499P-201ENST00000365615 107 ntBASIC-1.93□□□□□ -2.72
COL1A1P02452 RNU6-794P-201ENST00000517261 64 ntBASIC-1.93□□□□□ -2.72
COL1A1P02452 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.94□□□□□ -2.72
COL1A1P02452 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.96□□□□□ -2.72
COL1A1P02452 AC125388.1-201ENST00000459631 156 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 256.4 ms