Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.81□□□□□ -2.86
SHOX2O60902 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.81□□□□□ -2.86
SHOX2O60902 AL365222.1-201ENST00000614661 98 ntBASIC-2.81□□□□□ -2.86
SHOX2O60902 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.84□□□□□ -2.86
SHOX2O60902 RNU6-838P-201ENST00000363399 108 ntBASIC-2.85□□□□□ -2.87
SHOX2O60902 RNU6-640P-201ENST00000363693 105 ntBASIC-2.85□□□□□ -2.87
SHOX2O60902 U6.111-201ENST00000636093 83 ntBASIC-2.85□□□□□ -2.87
SHOX2O60902 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.86□□□□□ -2.87
SHOX2O60902 RNU6-539P-201ENST00000516665 103 ntBASIC-2.86□□□□□ -2.87
SHOX2O60902 MIR4666B-201ENST00000578142 81 ntBASIC-2.86□□□□□ -2.87
SHOX2O60902 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.87□□□□□ -2.87
SHOX2O60902 U7.4-201ENST00000614961 63 ntBASIC-2.87□□□□□ -2.87
SHOX2O60902 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.88□□□□□ -2.87
SHOX2O60902 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.88□□□□□ -2.87
SHOX2O60902 MIR3133-201ENST00000583157 78 ntBASIC-2.88□□□□□ -2.87
SHOX2O60902 MIR4679-1-201ENST00000637619 75 ntBASIC-2.89□□□□□ -2.87
SHOX2O60902 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.9□□□□□ -2.87
SHOX2O60902 SNORD113-4-201ENST00000364802 75 ntBASIC-2.9□□□□□ -2.87
SHOX2O60902 SNORD30.1-201ENST00000391309 70 ntBASIC-2.9□□□□□ -2.87
SHOX2O60902 AC114801.3-201ENST00000510231 177 ntBASIC-2.9□□□□□ -2.87
SHOX2O60902 SNORD113-1-201ENST00000365321 69 ntBASIC-2.91□□□□□ -2.88
SHOX2O60902 RNU6-81P-201ENST00000365608 104 ntBASIC-2.93□□□□□ -2.88
SHOX2O60902 IGLL4P-201ENST00000614590 133 ntBASIC-2.93□□□□□ -2.88
SHOX2O60902 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.94□□□□□ -2.88
SHOX2O60902 AC090425.1-201ENST00000610007 140 ntBASIC-2.94□□□□□ -2.88
SHOX2O60902 RNU6-787P-201ENST00000384032 107 ntBASIC-2.95□□□□□ -2.88
SHOX2O60902 RNU6-209P-201ENST00000384118 107 ntBASIC-2.95□□□□□ -2.88
SHOX2O60902 RNU6-871P-201ENST00000516122 100 ntBASIC-2.95□□□□□ -2.88
SHOX2O60902 RNU6-627P-201ENST00000364032 102 ntBASIC-2.97□□□□□ -2.88
SHOX2O60902 RNU6-32P-201ENST00000383948 107 ntBASIC-2.98□□□□□ -2.89
SHOX2O60902 RNU6-13P-201ENST00000384248 107 ntBASIC-2.98□□□□□ -2.89
SHOX2O60902 RNU6-12P-201ENST00000384604 107 ntBASIC-2.98□□□□□ -2.89
SHOX2O60902 RNU6-41P-201ENST00000384741 107 ntBASIC-2.98□□□□□ -2.89
SHOX2O60902 RNU6-986P-201ENST00000363133 102 ntBASIC-2.99□□□□□ -2.89
SHOX2O60902 RNU6-471P-201ENST00000383944 106 ntBASIC-2.99□□□□□ -2.89
SHOX2O60902 Y_RNA.386-201ENST00000383913 105 ntBASIC-3□□□□□ -2.89
SHOX2O60902 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3□□□□□ -2.89
SHOX2O60902 RNU6-22P-201ENST00000384355 107 ntBASIC-3.01□□□□□ -2.89
SHOX2O60902 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.02□□□□□ -2.89
SHOX2O60902 Y_RNA.379-201ENST00000365653 102 ntBASIC-3.02□□□□□ -2.89
SHOX2O60902 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.02□□□□□ -2.89
SHOX2O60902 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.04□□□□□ -2.9
SHOX2O60902 RNU6-49P-201ENST00000384256 107 ntBASIC-3.05□□□□□ -2.9
SHOX2O60902 MIR548F3-201ENST00000408509 87 ntBASIC-3.05□□□□□ -2.9
SHOX2O60902 RNU6-829P-201ENST00000363700 112 ntBASIC-3.06□□□□□ -2.9
SHOX2O60902 RNU6-620P-201ENST00000384017 96 ntBASIC-3.06□□□□□ -2.9
SHOX2O60902 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.07□□□□□ -2.9
SHOX2O60902 RNU6-147P-201ENST00000383983 107 ntBASIC-3.07□□□□□ -2.9
SHOX2O60902 RNU6-242P-201ENST00000384359 107 ntBASIC-3.07□□□□□ -2.9
SHOX2O60902 MIR494-201ENST00000349529 81 ntBASIC-3.08□□□□□ -2.9
SHOX2O60902 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.09□□□□□ -2.9
SHOX2O60902 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.09□□□□□ -2.9
SHOX2O60902 RNY4P19-201ENST00000362530 96 ntBASIC-3.1□□□□□ -2.91
SHOX2O60902 RNU6-794P-201ENST00000517261 64 ntBASIC-3.1□□□□□ -2.91
SHOX2O60902 RNU6-313P-201ENST00000516317 112 ntBASIC-3.12□□□□□ -2.91
SHOX2O60902 AC099654.10-201ENST00000640395 161 ntBASIC-3.13□□□□□ -2.91
SHOX2O60902 MIR450A2-201ENST00000385022 100 ntBASIC-3.14□□□□□ -2.91
SHOX2O60902 RNU6-1091P-201ENST00000363945 107 ntBASIC-3.15□□□□□ -2.91
SHOX2O60902 RNU6-294P-201ENST00000364999 102 ntBASIC-3.15□□□□□ -2.91
SHOX2O60902 RNU6-820P-201ENST00000384273 107 ntBASIC-3.19□□□□□ -2.92
SHOX2O60902 RNU6-930P-201ENST00000390938 100 ntBASIC-3.19□□□□□ -2.92
SHOX2O60902 RNU6-279P-201ENST00000391297 101 ntBASIC-3.2□□□□□ -2.92
SHOX2O60902 RNU6-406P-201ENST00000516470 107 ntBASIC-3.2□□□□□ -2.92
SHOX2O60902 RNU6-753P-201ENST00000363926 107 ntBASIC-3.21□□□□□ -2.92
SHOX2O60902 AC079150.2-201ENST00000443733 78 ntBASIC-3.21□□□□□ -2.92
SHOX2O60902 RNU6-485P-201ENST00000363475 107 ntBASIC-3.22□□□□□ -2.92
SHOX2O60902 SNORD111B-201ENST00000408587 80 ntBASIC-3.22□□□□□ -2.92
SHOX2O60902 MIR633-201ENST00000384821 98 ntBASIC-3.23□□□□□ -2.93
SHOX2O60902 RNU6-857P-201ENST00000515893 110 ntBASIC-3.25□□□□□ -2.93
SHOX2O60902 MIR4719-201ENST00000585233 84 ntBASIC-3.25□□□□□ -2.93
SHOX2O60902 SNORA26.2-201ENST00000390922 122 ntBASIC-3.26□□□□□ -2.93
SHOX2O60902 RNA5SP89-201ENST00000410300 108 ntBASIC-3.27□□□□□ -2.93
SHOX2O60902 MIR3202-2-201ENST00000635980 79 ntBASIC-3.27□□□□□ -2.93
SHOX2O60902 RNU6-215P-201ENST00000365169 102 ntBASIC-3.29□□□□□ -2.94
SHOX2O60902 RNU6-894P-201ENST00000517094 105 ntBASIC-3.29□□□□□ -2.94
SHOX2O60902 RNU6-1275P-201ENST00000391087 107 ntBASIC-3.32□□□□□ -2.94
SHOX2O60902 RNU6-919P-201ENST00000516731 104 ntBASIC-3.32□□□□□ -2.94
SHOX2O60902 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.32□□□□□ -2.94
SHOX2O60902 RNY4P30-201ENST00000410216 95 ntBASIC-3.33□□□□□ -2.94
SHOX2O60902 RNU6-153P-201ENST00000364422 104 ntBASIC-3.34□□□□□ -2.94
SHOX2O60902 SNORD20-201ENST00000384550 80 ntBASIC-3.34□□□□□ -2.94
SHOX2O60902 MIR548M-201ENST00000408260 86 ntBASIC-3.39□□□□□ -2.95
SHOX2O60902 MIR1255A-201ENST00000408338 113 ntBASIC-3.39□□□□□ -2.95
SHOX2O60902 Y_RNA.694-201ENST00000516677 117 ntBASIC-3.39□□□□□ -2.95
SHOX2O60902 MIR3910-1-201ENST00000580936 111 ntBASIC-3.39□□□□□ -2.95
SHOX2O60902 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.4□□□□□ -2.95
SHOX2O60902 RNU6-936P-201ENST00000384005 107 ntBASIC-3.4□□□□□ -2.95
SHOX2O60902 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.42□□□□□ -2.96
SHOX2O60902 U6.103-201ENST00000637085 61 ntBASIC-3.42□□□□□ -2.96
SHOX2O60902 MIR4662A-201ENST00000637499 67 ntBASIC-3.42□□□□□ -2.96
SHOX2O60902 RNU6-499P-201ENST00000365615 107 ntBASIC-3.43□□□□□ -2.96
SHOX2O60902 RNU6-44P-201ENST00000384045 107 ntBASIC-3.43□□□□□ -2.96
SHOX2O60902 RNU6-133P-201ENST00000383989 107 ntBASIC-3.48□□□□□ -2.97
SHOX2O60902 RNU6-892P-201ENST00000410335 99 ntBASIC-3.49□□□□□ -2.97
SHOX2O60902 RNU6-573P-201ENST00000383938 106 ntBASIC-3.53□□□□□ -2.97
SHOX2O60902 MIR3671-201ENST00000580455 88 ntBASIC-3.53□□□□□ -2.97
SHOX2O60902 MT-TR-201ENST00000387439 65 ntBASIC-3.54□□□□□ -2.98
SHOX2O60902 SNORD78.1-201ENST00000390866 65 ntBASIC-3.54□□□□□ -2.98
SHOX2O60902 MIR5582-201ENST00000579697 68 ntBASIC-3.54□□□□□ -2.98
SHOX2O60902 snosnR66.1-201ENST00000391095 99 ntBASIC-3.56□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms