Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.43□□□□□ -2.96
TOPBP1Q92547 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.44□□□□□ -2.96
TOPBP1Q92547 RNU6-345P-201ENST00000517001 107 ntBASIC-3.44□□□□□ -2.96
TOPBP1Q92547 MIR1254-1-201ENST00000408257 97 ntBASIC-3.44□□□□□ -2.96
TOPBP1Q92547 RNU6-81P-201ENST00000365608 104 ntBASIC-3.46□□□□□ -2.96
TOPBP1Q92547 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.46□□□□□ -2.96
TOPBP1Q92547 MIR4712-201ENST00000583750 82 ntBASIC-3.46□□□□□ -2.96
TOPBP1Q92547 RNU7-171P-201ENST00000459581 62 ntBASIC-3.47□□□□□ -2.96
TOPBP1Q92547 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.47□□□□□ -2.96
TOPBP1Q92547 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.48□□□□□ -2.97
TOPBP1Q92547 RNU6-803P-201ENST00000516034 102 ntBASIC-3.48□□□□□ -2.97
TOPBP1Q92547 RNU6-122P-201ENST00000516818 107 ntBASIC-3.48□□□□□ -2.97
TOPBP1Q92547 RNU6-640P-201ENST00000363693 105 ntBASIC-3.49□□□□□ -2.97
TOPBP1Q92547 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.49□□□□□ -2.97
TOPBP1Q92547 Y_RNA.788-201ENST00000622394 112 ntBASIC-3.49□□□□□ -2.97
TOPBP1Q92547 RNU6-230P-201ENST00000362457 104 ntBASIC-3.49□□□□□ -2.97
TOPBP1Q92547 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.5□□□□□ -2.97
TOPBP1Q92547 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.5□□□□□ -2.97
TOPBP1Q92547 RNU6-32P-201ENST00000383948 107 ntBASIC-3.51□□□□□ -2.97
TOPBP1Q92547 RNU6-13P-201ENST00000384248 107 ntBASIC-3.51□□□□□ -2.97
TOPBP1Q92547 RNU6-12P-201ENST00000384604 107 ntBASIC-3.51□□□□□ -2.97
TOPBP1Q92547 RNU6-41P-201ENST00000384741 107 ntBASIC-3.51□□□□□ -2.97
TOPBP1Q92547 RNU6-419P-201ENST00000517030 63 ntBASIC-3.51□□□□□ -2.97
TOPBP1Q92547 RNU6-411P-201ENST00000384451 107 ntBASIC-3.52□□□□□ -2.97
TOPBP1Q92547 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.53□□□□□ -2.97
TOPBP1Q92547 RNU6-742P-201ENST00000365289 107 ntBASIC-3.53□□□□□ -2.97
TOPBP1Q92547 RNU6-22P-201ENST00000384355 107 ntBASIC-3.53□□□□□ -2.97
TOPBP1Q92547 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.54□□□□□ -2.98
TOPBP1Q92547 RNU6-663P-201ENST00000391105 106 ntBASIC-3.54□□□□□ -2.98
TOPBP1Q92547 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.55□□□□□ -2.98
TOPBP1Q92547 AL731768.1-201ENST00000603124 139 ntBASIC-3.55□□□□□ -2.98
TOPBP1Q92547 RNU6-940P-201ENST00000363433 104 ntBASIC-3.56□□□□□ -2.98
TOPBP1Q92547 RNY4P25-201ENST00000459254 96 ntBASIC-3.56□□□□□ -2.98
TOPBP1Q92547 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.58□□□□□ -2.98
TOPBP1Q92547 U7.4-201ENST00000614961 63 ntBASIC-3.58□□□□□ -2.98
TOPBP1Q92547 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.6□□□□□ -2.98
TOPBP1Q92547 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.6□□□□□ -2.98
TOPBP1Q92547 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.6□□□□□ -2.99
TOPBP1Q92547 RNU6-800P-201ENST00000384473 103 ntBASIC-3.6□□□□□ -2.99
TOPBP1Q92547 MIR3938-201ENST00000582157 103 ntBASIC-3.6□□□□□ -2.99
TOPBP1Q92547 RNU6-822P-201ENST00000362707 106 ntBASIC-3.61□□□□□ -2.99
TOPBP1Q92547 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.61□□□□□ -2.99
TOPBP1Q92547 MIR5693-201ENST00000577722 73 ntBASIC-3.61□□□□□ -2.99
TOPBP1Q92547 AC090425.1-201ENST00000610007 140 ntBASIC-3.61□□□□□ -2.99
TOPBP1Q92547 RNU6-634P-201ENST00000459134 106 ntBASIC-3.62□□□□□ -2.99
TOPBP1Q92547 SNORA25.4-201ENST00000363666 124 ntBASIC-3.63□□□□□ -2.99
TOPBP1Q92547 RNU6-1131P-201ENST00000364955 107 ntBASIC-3.63□□□□□ -2.99
TOPBP1Q92547 RNU6-794P-201ENST00000517261 64 ntBASIC-3.63□□□□□ -2.99
TOPBP1Q92547 AC062037.1-201ENST00000605302 128 ntBASIC-3.63□□□□□ -2.99
TOPBP1Q92547 RNU6-49P-201ENST00000384256 107 ntBASIC-3.64□□□□□ -2.99
TOPBP1Q92547 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.65□□□□□ -2.99
TOPBP1Q92547 RNU6-147P-201ENST00000383983 107 ntBASIC-3.65□□□□□ -2.99
TOPBP1Q92547 RNU6-242P-201ENST00000384359 107 ntBASIC-3.65□□□□□ -2.99
TOPBP1Q92547 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.66□□□□□ -3
TOPBP1Q92547 MIR4666B-201ENST00000578142 81 ntBASIC-3.66□□□□□ -3
TOPBP1Q92547 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.66□□□□□ -3
TOPBP1Q92547 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.67□□□□□ -3
TOPBP1Q92547 SNORD30.1-201ENST00000391309 70 ntBASIC-3.67□□□□□ -3
TOPBP1Q92547 RNU6-313P-201ENST00000516317 112 ntBASIC-3.67□□□□□ -3
TOPBP1Q92547 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.68□□□□□ -3
TOPBP1Q92547 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.69□□□□□ -3
TOPBP1Q92547 MIR4511-201ENST00000582784 87 ntBASIC-3.7□□□□□ -3
TOPBP1Q92547 RNU6-209P-201ENST00000384118 107 ntBASIC-3.71□□□□□ -3
TOPBP1Q92547 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.73□□□□□ -3.01
TOPBP1Q92547 AC103706.3-201ENST00000636297 85 ntBASIC-3.73□□□□□ -3.01
TOPBP1Q92547 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.74□□□□□ -3.01
TOPBP1Q92547 MIR494-201ENST00000349529 81 ntBASIC-3.75□□□□□ -3.01
TOPBP1Q92547 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.75□□□□□ -3.01
TOPBP1Q92547 MIR450A2-201ENST00000385022 100 ntBASIC-3.75□□□□□ -3.01
TOPBP1Q92547 MIR4317-201ENST00000637586 65 ntBASIC-3.75□□□□□ -3.01
TOPBP1Q92547 MIR548X-201ENST00000580069 75 ntBASIC-3.76□□□□□ -3.01
TOPBP1Q92547 RNY4P30-201ENST00000410216 95 ntBASIC-3.78□□□□□ -3.01
TOPBP1Q92547 AC139453.2-201ENST00000487255 133 ntBASIC-3.79□□□□□ -3.02
TOPBP1Q92547 RNU6-787P-201ENST00000384032 107 ntBASIC-3.8□□□□□ -3.02
TOPBP1Q92547 RNU6-871P-201ENST00000516122 100 ntBASIC-3.82□□□□□ -3.02
TOPBP1Q92547 MIR4679-1-201ENST00000637619 75 ntBASIC-3.83□□□□□ -3.02
TOPBP1Q92547 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.84□□□□□ -3.02
TOPBP1Q92547 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.84□□□□□ -3.02
TOPBP1Q92547 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.84□□□□□ -3.02
TOPBP1Q92547 AC099654.10-201ENST00000640395 161 ntBASIC-3.84□□□□□ -3.02
TOPBP1Q92547 RNA5SP89-201ENST00000410300 108 ntBASIC-3.85□□□□□ -3.03
TOPBP1Q92547 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.85□□□□□ -3.03
TOPBP1Q92547 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.85□□□□□ -3.03
TOPBP1Q92547 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-3.85□□□□□ -3.03
TOPBP1Q92547 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.86□□□□□ -3.03
TOPBP1Q92547 U6.111-201ENST00000636093 83 ntBASIC-3.86□□□□□ -3.03
TOPBP1Q92547 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.87□□□□□ -3.03
TOPBP1Q92547 RNU6-539P-201ENST00000516665 103 ntBASIC-3.87□□□□□ -3.03
TOPBP1Q92547 RNU6-919P-201ENST00000516731 104 ntBASIC-3.87□□□□□ -3.03
TOPBP1Q92547 MIR4719-201ENST00000585233 84 ntBASIC-3.88□□□□□ -3.03
TOPBP1Q92547 AL359920.1-201ENST00000618332 176 ntBASIC-3.88□□□□□ -3.03
TOPBP1Q92547 RNU6-737P-201ENST00000365370 107 ntBASIC-3.89□□□□□ -3.03
TOPBP1Q92547 SNORD20-201ENST00000384550 80 ntBASIC-3.89□□□□□ -3.03
TOPBP1Q92547 MIR656-201ENST00000385224 78 ntBASIC-3.89□□□□□ -3.03
TOPBP1Q92547 RNU6-820P-201ENST00000384273 107 ntBASIC-3.9□□□□□ -3.03
TOPBP1Q92547 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.9□□□□□ -3.03
TOPBP1Q92547 MIR548M-201ENST00000408260 86 ntBASIC-3.9□□□□□ -3.03
TOPBP1Q92547 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.9□□□□□ -3.03
TOPBP1Q92547 AC110620.1-201ENST00000416042 228 ntBASIC-3.9□□□□□ -3.03
TOPBP1Q92547 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.91□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms