Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 Y_RNA.702-201ENST00000516843 96 ntBASIC-4.32□□□□□ -3.1
RPS28P62857 RNU6-255P-201ENST00000516957 105 ntBASIC-4.32□□□□□ -3.1
RPS28P62857 RNU6-940P-201ENST00000363433 104 ntBASIC-4.33□□□□□ -3.1
RPS28P62857 SNORA20.1-201ENST00000364790 130 ntBASIC-4.33□□□□□ -3.1
RPS28P62857 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.33□□□□□ -3.1
RPS28P62857 Y_RNA.607-201ENST00000410597 98 ntBASIC-4.33□□□□□ -3.1
RPS28P62857 RNU6-675P-201ENST00000384236 104 ntBASIC-4.34□□□□□ -3.1
RPS28P62857 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.35□□□□□ -3.11
RPS28P62857 Y_RNA.460-201ENST00000384255 102 ntBASIC-4.35□□□□□ -3.11
RPS28P62857 Y_RNA.720-201ENST00000517166 92 ntBASIC-4.35□□□□□ -3.11
RPS28P62857 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.36□□□□□ -3.11
RPS28P62857 RNU6-1023P-201ENST00000516137 106 ntBASIC-4.36□□□□□ -3.11
RPS28P62857 RNU6-804P-201ENST00000384286 107 ntBASIC-4.37□□□□□ -3.11
RPS28P62857 SNORA40-201ENST00000388090 126 ntBASIC-4.38□□□□□ -3.11
RPS28P62857 RNU6-663P-201ENST00000391105 106 ntBASIC-4.39□□□□□ -3.11
RPS28P62857 RNU6-257P-201ENST00000410238 98 ntBASIC-4.39□□□□□ -3.11
RPS28P62857 MIR4712-201ENST00000583750 82 ntBASIC-4.39□□□□□ -3.11
RPS28P62857 SNORA25.4-201ENST00000363666 124 ntBASIC-4.4□□□□□ -3.11
RPS28P62857 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.4□□□□□ -3.11
RPS28P62857 MIR548F4-201ENST00000408515 105 ntBASIC-4.4□□□□□ -3.11
RPS28P62857 RNU7-120P-201ENST00000459334 63 ntBASIC-4.4□□□□□ -3.11
RPS28P62857 MIR548AL-201ENST00000578416 97 ntBASIC-4.4□□□□□ -3.11
RPS28P62857 MALAT1.1-201ENST00000618249 95 ntBASIC-4.4□□□□□ -3.11
RPS28P62857 MIR2052-201ENST00000636055 55 ntBASIC-4.4□□□□□ -3.11
RPS28P62857 Y_RNA.165-201ENST00000363721 102 ntBASIC-4.41□□□□□ -3.12
RPS28P62857 Y_RNA.297-201ENST00000364950 91 ntBASIC-4.41□□□□□ -3.12
RPS28P62857 MIR363-201ENST00000384840 75 ntBASIC-4.42□□□□□ -3.12
RPS28P62857 Y_RNA.149-201ENST00000363558 117 ntBASIC-4.44□□□□□ -3.12
RPS28P62857 Y_RNA.273-201ENST00000364703 102 ntBASIC-4.45□□□□□ -3.12
RPS28P62857 MIR4511-201ENST00000582784 87 ntBASIC-4.46□□□□□ -3.12
RPS28P62857 MTND5P41-201ENST00000517498 206 ntBASIC-4.47□□□□□ -3.13
RPS28P62857 RNU6-808P-201ENST00000391233 108 ntBASIC-4.48□□□□□ -3.13
RPS28P62857 RNU6-634P-201ENST00000459134 106 ntBASIC-4.48□□□□□ -3.13
RPS28P62857 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.48□□□□□ -3.13
RPS28P62857 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.5□□□□□ -3.13
RPS28P62857 MIR1245B-201ENST00000636115 69 ntBASIC-4.5□□□□□ -3.13
RPS28P62857 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.52□□□□□ -3.13
RPS28P62857 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.52□□□□□ -3.13
RPS28P62857 Y_RNA.619-201ENST00000410951 90 ntBASIC-4.52□□□□□ -3.13
RPS28P62857 RNU6-844P-201ENST00000517175 102 ntBASIC-4.52□□□□□ -3.13
RPS28P62857 RNU6-1312P-201ENST00000362425 108 ntBASIC-4.53□□□□□ -3.13
RPS28P62857 Y_RNA.94-201ENST00000363068 106 ntBASIC-4.53□□□□□ -3.13
RPS28P62857 AC062037.2-201ENST00000610137 73 ntBASIC-4.53□□□□□ -3.13
RPS28P62857 AL117187.1-201ENST00000555482 181 ntBASIC-4.54□□□□□ -3.14
RPS28P62857 MIR5588-201ENST00000581890 63 ntBASIC-4.54□□□□□ -3.14
RPS28P62857 AC103706.3-201ENST00000636297 85 ntBASIC-4.54□□□□□ -3.14
RPS28P62857 RNU6-959P-201ENST00000384671 107 ntBASIC-4.56□□□□□ -3.14
RPS28P62857 MIR488-201ENST00000365739 83 ntBASIC-4.58□□□□□ -3.14
RPS28P62857 RNU6-209P-201ENST00000384118 107 ntBASIC-4.59□□□□□ -3.14
RPS28P62857 RNU6-1024P-201ENST00000384199 107 ntBASIC-4.59□□□□□ -3.14
RPS28P62857 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.59□□□□□ -3.14
RPS28P62857 RNU4-33P-201ENST00000364316 85 ntBASIC-4.6□□□□□ -3.15
RPS28P62857 Y_RNA.422-201ENST00000384054 114 ntBASIC-4.6□□□□□ -3.15
RPS28P62857 SNORD30.1-201ENST00000391309 70 ntBASIC-4.6□□□□□ -3.15
RPS28P62857 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.6□□□□□ -3.15
RPS28P62857 MIR548S-201ENST00000581352 82 ntBASIC-4.6□□□□□ -3.15
RPS28P62857 MIR1302-3-201ENST00000408128 138 ntBASIC-4.61□□□□□ -3.15
RPS28P62857 Y_RNA.565-201ENST00000384719 101 ntBASIC-4.62□□□□□ -3.15
RPS28P62857 SNORA40.13-201ENST00000516379 120 ntBASIC-4.62□□□□□ -3.15
RPS28P62857 RNU6-59P-201ENST00000384787 107 ntBASIC-4.63□□□□□ -3.15
RPS28P62857 RNU6-446P-201ENST00000362827 106 ntBASIC-4.64□□□□□ -3.15
RPS28P62857 AC110620.1-201ENST00000416042 228 ntBASIC-4.64□□□□□ -3.15
RPS28P62857 RNU7-171P-201ENST00000459581 62 ntBASIC-4.64□□□□□ -3.15
RPS28P62857 RNU6-916P-201ENST00000516088 109 ntBASIC-4.64□□□□□ -3.15
RPS28P62857 Y_RNA.343-201ENST00000365354 112 ntBASIC-4.65□□□□□ -3.15
RPS28P62857 MIR450A1-201ENST00000362262 91 ntBASIC-4.66□□□□□ -3.16
RPS28P62857 SNORD116-14-201ENST00000383894 92 ntBASIC-4.67□□□□□ -3.16
RPS28P62857 SNORD116-17-201ENST00000383929 92 ntBASIC-4.67□□□□□ -3.16
RPS28P62857 SNORD116-15-201ENST00000384445 92 ntBASIC-4.67□□□□□ -3.16
RPS28P62857 SNORD116-19-201ENST00000384729 92 ntBASIC-4.67□□□□□ -3.16
RPS28P62857 U6.111-201ENST00000636093 83 ntBASIC-4.67□□□□□ -3.16
RPS28P62857 AC044792.1-201ENST00000593294 196 ntBASIC-4.68□□□□□ -3.16
RPS28P62857 IGLL4P-201ENST00000614590 133 ntBASIC-4.69□□□□□ -3.16
RPS28P62857 MTCYBP6-201ENST00000441810 138 ntBASIC-4.7□□□□□ -3.16
RPS28P62857 Y_RNA.535-201ENST00000384612 99 ntBASIC-4.71□□□□□ -3.16
RPS28P62857 SNORD113-4-201ENST00000364802 75 ntBASIC-4.72□□□□□ -3.17
RPS28P62857 AL031737.1-201ENST00000450125 223 ntBASIC-4.72□□□□□ -3.17
RPS28P62857 RNU7-200P-201ENST00000516105 62 ntBASIC-4.72□□□□□ -3.17
RPS28P62857 RNU6-589P-201ENST00000516485 107 ntBASIC-4.72□□□□□ -3.17
RPS28P62857 AL353621.2-201ENST00000605340 133 ntBASIC-4.72□□□□□ -3.17
RPS28P62857 RNU6-627P-201ENST00000364032 102 ntBASIC-4.73□□□□□ -3.17
RPS28P62857 RNU6-1160P-201ENST00000384546 104 ntBASIC-4.73□□□□□ -3.17
RPS28P62857 Y_RNA.545-201ENST00000384652 105 ntBASIC-4.73□□□□□ -3.17
RPS28P62857 U7.4-201ENST00000614961 63 ntBASIC-4.73□□□□□ -3.17
RPS28P62857 AC114801.3-201ENST00000510231 177 ntBASIC-4.74□□□□□ -3.17
RPS28P62857 RNU6-640P-201ENST00000363693 105 ntBASIC-4.76□□□□□ -3.17
RPS28P62857 RNU6-200P-201ENST00000364743 107 ntBASIC-4.76□□□□□ -3.17
RPS28P62857 MTCYBP9-201ENST00000431021 303 ntBASIC-4.76□□□□□ -3.17
RPS28P62857 AC008737.2-201ENST00000599446 118 ntBASIC-4.76□□□□□ -3.17
RPS28P62857 Y_RNA.15-201ENST00000362420 102 ntBASIC-4.77□□□□□ -3.17
RPS28P62857 RNU6-986P-201ENST00000363133 102 ntBASIC-4.77□□□□□ -3.17
RPS28P62857 RNU6-539P-201ENST00000516665 103 ntBASIC-4.77□□□□□ -3.17
RPS28P62857 Y_RNA.379-201ENST00000365653 102 ntBASIC-4.79□□□□□ -3.18
RPS28P62857 MIR4679-1-201ENST00000637619 75 ntBASIC-4.79□□□□□ -3.18
RPS28P62857 RNU6-346P-201ENST00000516288 111 ntBASIC-4.8□□□□□ -3.18
RPS28P62857 RNU6-838P-201ENST00000363399 108 ntBASIC-4.81□□□□□ -3.18
RPS28P62857 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-4.82□□□□□ -3.18
RPS28P62857 SNORD113-1-201ENST00000365321 69 ntBASIC-4.83□□□□□ -3.18
RPS28P62857 MIR568-201ENST00000385036 95 ntBASIC-4.83□□□□□ -3.18
RPS28P62857 MIR4666B-201ENST00000578142 81 ntBASIC-4.84□□□□□ -3.18
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms