Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 RNU6-122P-201ENST00000516818 107 ntBASIC-2.5□□□□□ -2.81
FOXA3P55318 MIR5693-201ENST00000577722 73 ntBASIC-2.5□□□□□ -2.81
FOXA3P55318 MIR4712-201ENST00000583750 82 ntBASIC-2.5□□□□□ -2.81
FOXA3P55318 AL731768.1-201ENST00000603124 139 ntBASIC-2.5□□□□□ -2.81
FOXA3P55318 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.51□□□□□ -2.81
FOXA3P55318 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.52□□□□□ -2.81
FOXA3P55318 MIR1245B-201ENST00000636115 69 ntBASIC-2.52□□□□□ -2.81
FOXA3P55318 RNU6-1169P-201ENST00000363537 103 ntBASIC-2.53□□□□□ -2.81
FOXA3P55318 RNU6-979P-201ENST00000383896 107 ntBASIC-2.53□□□□□ -2.81
FOXA3P55318 RNU6-640P-201ENST00000363693 105 ntBASIC-2.54□□□□□ -2.82
FOXA3P55318 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.54□□□□□ -2.82
FOXA3P55318 RNU6-800P-201ENST00000384473 103 ntBASIC-2.54□□□□□ -2.82
FOXA3P55318 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.54□□□□□ -2.82
FOXA3P55318 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.56□□□□□ -2.82
FOXA3P55318 RNU6-419P-201ENST00000517030 63 ntBASIC-2.56□□□□□ -2.82
FOXA3P55318 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.57□□□□□ -2.82
FOXA3P55318 RNU6-663P-201ENST00000391105 106 ntBASIC-2.57□□□□□ -2.82
FOXA3P55318 MIR3133-201ENST00000583157 78 ntBASIC-2.57□□□□□ -2.82
FOXA3P55318 RNU6-822P-201ENST00000362707 106 ntBASIC-2.58□□□□□ -2.82
FOXA3P55318 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.58□□□□□ -2.82
FOXA3P55318 RNU6-411P-201ENST00000384451 107 ntBASIC-2.58□□□□□ -2.82
FOXA3P55318 RNU7-171P-201ENST00000459581 62 ntBASIC-2.58□□□□□ -2.82
FOXA3P55318 AP001094.1-201ENST00000579805 193 ntBASIC-2.59□□□□□ -2.82
FOXA3P55318 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.6□□□□□ -2.83
FOXA3P55318 RNU6-32P-201ENST00000383948 107 ntBASIC-2.61□□□□□ -2.83
FOXA3P55318 RNU6-13P-201ENST00000384248 107 ntBASIC-2.61□□□□□ -2.83
FOXA3P55318 RNU6-12P-201ENST00000384604 107 ntBASIC-2.61□□□□□ -2.83
FOXA3P55318 RNU6-41P-201ENST00000384741 107 ntBASIC-2.61□□□□□ -2.83
FOXA3P55318 Y_RNA.703-201ENST00000516846 111 ntBASIC-2.61□□□□□ -2.83
FOXA3P55318 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.61□□□□□ -2.83
FOXA3P55318 AC062037.1-201ENST00000605302 128 ntBASIC-2.62□□□□□ -2.83
FOXA3P55318 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.63□□□□□ -2.83
FOXA3P55318 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.63□□□□□ -2.83
FOXA3P55318 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.63□□□□□ -2.83
FOXA3P55318 RNU6-634P-201ENST00000459134 106 ntBASIC-2.63□□□□□ -2.83
FOXA3P55318 Y_RNA.134-201ENST00000363435 105 ntBASIC-2.64□□□□□ -2.83
FOXA3P55318 SNORA25.4-201ENST00000363666 124 ntBASIC-2.64□□□□□ -2.83
FOXA3P55318 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.64□□□□□ -2.83
FOXA3P55318 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.64□□□□□ -2.83
FOXA3P55318 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.65□□□□□ -2.83
FOXA3P55318 RNU6-940P-201ENST00000363433 104 ntBASIC-2.65□□□□□ -2.83
FOXA3P55318 RNU6-49P-201ENST00000384256 107 ntBASIC-2.65□□□□□ -2.83
FOXA3P55318 MIR3938-201ENST00000582157 103 ntBASIC-2.65□□□□□ -2.83
FOXA3P55318 RNU6-737P-201ENST00000365370 107 ntBASIC-2.66□□□□□ -2.84
FOXA3P55318 SNORD30.1-201ENST00000391309 70 ntBASIC-2.66□□□□□ -2.84
FOXA3P55318 AC139453.2-201ENST00000487255 133 ntBASIC-2.66□□□□□ -2.84
FOXA3P55318 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.67□□□□□ -2.84
FOXA3P55318 RNU6-81P-201ENST00000365608 104 ntBASIC-2.67□□□□□ -2.84
FOXA3P55318 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.67□□□□□ -2.84
FOXA3P55318 U7.4-201ENST00000614961 63 ntBASIC-2.67□□□□□ -2.84
FOXA3P55318 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.68□□□□□ -2.84
FOXA3P55318 RNU6-22P-201ENST00000384355 107 ntBASIC-2.68□□□□□ -2.84
FOXA3P55318 RNU6-147P-201ENST00000383983 107 ntBASIC-2.69□□□□□ -2.84
FOXA3P55318 RNU6-242P-201ENST00000384359 107 ntBASIC-2.69□□□□□ -2.84
FOXA3P55318 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.69□□□□□ -2.84
FOXA3P55318 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-2.69□□□□□ -2.84
FOXA3P55318 MIR494-201ENST00000349529 81 ntBASIC-2.7□□□□□ -2.84
FOXA3P55318 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.7□□□□□ -2.84
FOXA3P55318 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.7□□□□□ -2.84
FOXA3P55318 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.7□□□□□ -2.84
FOXA3P55318 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.7□□□□□ -2.84
FOXA3P55318 AL359920.1-201ENST00000618332 176 ntBASIC-2.7□□□□□ -2.84
FOXA3P55318 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.71□□□□□ -2.84
FOXA3P55318 AC090425.1-201ENST00000610007 140 ntBASIC-2.71□□□□□ -2.84
FOXA3P55318 MIR4666B-201ENST00000578142 81 ntBASIC-2.72□□□□□ -2.84
FOXA3P55318 MIR4511-201ENST00000582784 87 ntBASIC-2.72□□□□□ -2.84
FOXA3P55318 MIR4317-201ENST00000637586 65 ntBASIC-2.72□□□□□ -2.84
FOXA3P55318 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.73□□□□□ -2.85
FOXA3P55318 SNORD115.2-201ENST00000391126 59 ntBASIC-2.73□□□□□ -2.85
FOXA3P55318 RNY4-201ENST00000516507 96 ntBASIC-2.73□□□□□ -2.85
FOXA3P55318 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.74□□□□□ -2.85
FOXA3P55318 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.75□□□□□ -2.85
FOXA3P55318 RNU6-313P-201ENST00000516317 112 ntBASIC-2.75□□□□□ -2.85
FOXA3P55318 MIR548X-201ENST00000580069 75 ntBASIC-2.75□□□□□ -2.85
FOXA3P55318 AC103706.3-201ENST00000636297 85 ntBASIC-2.75□□□□□ -2.85
FOXA3P55318 RNU6-1340P-201ENST00000384438 107 ntBASIC-2.76□□□□□ -2.85
FOXA3P55318 MIR656-201ENST00000385224 78 ntBASIC-2.76□□□□□ -2.85
FOXA3P55318 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.77□□□□□ -2.85
FOXA3P55318 RNA5SP224-201ENST00000365069 126 ntBASIC-2.78□□□□□ -2.85
FOXA3P55318 SNORD45C-201ENST00000383893 79 ntBASIC-2.78□□□□□ -2.85
FOXA3P55318 RNU6-787P-201ENST00000384032 107 ntBASIC-2.78□□□□□ -2.85
FOXA3P55318 SNORD114-13-201ENST00000364377 74 ntBASIC-2.79□□□□□ -2.86
FOXA3P55318 RNU6-803P-201ENST00000516034 102 ntBASIC-2.79□□□□□ -2.86
FOXA3P55318 U6.111-201ENST00000636093 83 ntBASIC-2.79□□□□□ -2.86
FOXA3P55318 RNU6-209P-201ENST00000384118 107 ntBASIC-2.8□□□□□ -2.86
FOXA3P55318 MIR450A2-201ENST00000385022 100 ntBASIC-2.81□□□□□ -2.86
FOXA3P55318 MIR509-1-201ENST00000385265 94 ntBASIC-2.81□□□□□ -2.86
FOXA3P55318 MIR509-2-201ENST00000390724 91 ntBASIC-2.81□□□□□ -2.86
FOXA3P55318 RNY4P30-201ENST00000410216 95 ntBASIC-2.81□□□□□ -2.86
FOXA3P55318 RNU6-836P-201ENST00000362920 107 ntBASIC-2.82□□□□□ -2.86
FOXA3P55318 RNU6-854P-201ENST00000364036 107 ntBASIC-2.82□□□□□ -2.86
FOXA3P55318 RNU6-871P-201ENST00000516122 100 ntBASIC-2.82□□□□□ -2.86
FOXA3P55318 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.82□□□□□ -2.86
FOXA3P55318 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-2.83□□□□□ -2.86
FOXA3P55318 RNA5SP89-201ENST00000410300 108 ntBASIC-2.84□□□□□ -2.86
FOXA3P55318 MIR4679-1-201ENST00000637619 75 ntBASIC-2.84□□□□□ -2.86
FOXA3P55318 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.85□□□□□ -2.87
FOXA3P55318 RNU6-539P-201ENST00000516665 103 ntBASIC-2.85□□□□□ -2.87
FOXA3P55318 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.86□□□□□ -2.87
FOXA3P55318 RNU6-794P-201ENST00000517261 64 ntBASIC-2.86□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms