Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.53□□□□□ -2.65
VCPP55072 RNU6-573P-201ENST00000383938 106 ntBASIC-1.54□□□□□ -2.66
VCPP55072 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.54□□□□□ -2.66
VCPP55072 U7.4-201ENST00000614961 63 ntBASIC-1.54□□□□□ -2.66
VCPP55072 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.55□□□□□ -2.66
VCPP55072 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.55□□□□□ -2.66
VCPP55072 RNU6-361P-201ENST00000364454 107 ntBASIC-1.55□□□□□ -2.66
VCPP55072 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.55□□□□□ -2.66
VCPP55072 SNORD18C-201ENST00000362704 69 ntBASIC-1.56□□□□□ -2.66
VCPP55072 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.56□□□□□ -2.66
VCPP55072 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.56□□□□□ -2.66
VCPP55072 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.56□□□□□ -2.66
VCPP55072 RNU6-530P-201ENST00000391180 107 ntBASIC-1.56□□□□□ -2.66
VCPP55072 SNORA17.4-201ENST00000391287 132 ntBASIC-1.57□□□□□ -2.66
VCPP55072 SNORA25.4-201ENST00000363666 124 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-742P-201ENST00000365289 107 ntBASIC-1.58□□□□□ -2.66
VCPP55072 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-820P-201ENST00000384273 107 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-118P-201ENST00000516552 102 ntBASIC-1.58□□□□□ -2.66
VCPP55072 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.59□□□□□ -2.66
VCPP55072 MIR1255A-201ENST00000408338 113 ntBASIC-1.59□□□□□ -2.66
VCPP55072 RNA5SP405-201ENST00000363059 114 ntBASIC-1.6□□□□□ -2.67
VCPP55072 SNORD73B-201ENST00000364394 72 ntBASIC-1.6□□□□□ -2.67
VCPP55072 SNORD113-3-201ENST00000364830 72 ntBASIC-1.6□□□□□ -2.67
VCPP55072 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.6□□□□□ -2.67
VCPP55072 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.6□□□□□ -2.67
VCPP55072 MIR4511-201ENST00000582784 87 ntBASIC-1.6□□□□□ -2.67
VCPP55072 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
VCPP55072 RNU6-912P-201ENST00000363800 104 ntBASIC-1.61□□□□□ -2.67
VCPP55072 SNORD60-201ENST00000383903 83 ntBASIC-1.61□□□□□ -2.67
VCPP55072 SNORD30.1-201ENST00000391309 70 ntBASIC-1.61□□□□□ -2.67
VCPP55072 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.61□□□□□ -2.67
VCPP55072 AL451105.1-201ENST00000450005 189 ntBASIC-1.61□□□□□ -2.67
VCPP55072 RNU6-857P-201ENST00000515893 110 ntBASIC-1.61□□□□□ -2.67
VCPP55072 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.61□□□□□ -2.67
VCPP55072 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.61□□□□□ -2.67
VCPP55072 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.62□□□□□ -2.67
VCPP55072 U6.111-201ENST00000636093 83 ntBASIC-1.62□□□□□ -2.67
VCPP55072 MIR4426-201ENST00000640330 63 ntBASIC-1.62□□□□□ -2.67
VCPP55072 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.63□□□□□ -2.67
VCPP55072 AC097484.2-201ENST00000509147 251 ntBASIC-1.63□□□□□ -2.67
VCPP55072 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.64□□□□□ -2.67
VCPP55072 RNA5SP225-201ENST00000410874 135 ntBASIC-1.64□□□□□ -2.67
VCPP55072 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.65□□□□□ -2.67
VCPP55072 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.65□□□□□ -2.67
VCPP55072 RNU6-279P-201ENST00000391297 101 ntBASIC-1.65□□□□□ -2.67
VCPP55072 RNU6-419P-201ENST00000517030 63 ntBASIC-1.65□□□□□ -2.67
VCPP55072 MIR4748-201ENST00000578076 82 ntBASIC-1.65□□□□□ -2.67
VCPP55072 MIR466-201ENST00000580653 84 ntBASIC-1.65□□□□□ -2.67
VCPP55072 RNY4P29-201ENST00000410801 97 ntBASIC-1.66□□□□□ -2.68
VCPP55072 MIR3938-201ENST00000582157 103 ntBASIC-1.66□□□□□ -2.68
VCPP55072 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.66□□□□□ -2.68
VCPP55072 RNU6-446P-201ENST00000362827 106 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 MIR3139-201ENST00000579145 76 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.67□□□□□ -2.68
VCPP55072 RNU6-194P-201ENST00000363862 105 ntBASIC-1.68□□□□□ -2.68
VCPP55072 RNU6-590P-201ENST00000365039 107 ntBASIC-1.68□□□□□ -2.68
VCPP55072 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.68□□□□□ -2.68
VCPP55072 AC110620.1-201ENST00000416042 228 ntBASIC-1.68□□□□□ -2.68
VCPP55072 RNU6-141P-201ENST00000410499 105 ntBASIC-1.69□□□□□ -2.68
VCPP55072 FTX_4.1-201ENST00000616291 147 ntBASIC-1.69□□□□□ -2.68
VCPP55072 RNU6-800P-201ENST00000384473 103 ntBASIC-1.7□□□□□ -2.68
VCPP55072 RNU7-119P-201ENST00000459279 63 ntBASIC-1.7□□□□□ -2.68
VCPP55072 RNU6-539P-201ENST00000516665 103 ntBASIC-1.7□□□□□ -2.68
VCPP55072 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.7□□□□□ -2.68
VCPP55072 MIR3202-2-201ENST00000635980 79 ntBASIC-1.7□□□□□ -2.68
VCPP55072 AC103706.3-201ENST00000636297 85 ntBASIC-1.7□□□□□ -2.68
VCPP55072 RNU6-940P-201ENST00000363433 104 ntBASIC-1.71□□□□□ -2.68
VCPP55072 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.71□□□□□ -2.68
VCPP55072 RNU6-300P-201ENST00000459080 104 ntBASIC-1.71□□□□□ -2.68
VCPP55072 RNA5SP170-201ENST00000517150 101 ntBASIC-1.72□□□□□ -2.68
VCPP55072 MIR1254-1-201ENST00000408257 97 ntBASIC-1.73□□□□□ -2.69
VCPP55072 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.74□□□□□ -2.69
VCPP55072 SNORD113-4-201ENST00000364802 75 ntBASIC-1.74□□□□□ -2.69
VCPP55072 SNORD78.1-201ENST00000390866 65 ntBASIC-1.74□□□□□ -2.69
VCPP55072 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.74□□□□□ -2.69
VCPP55072 SNORA26.2-201ENST00000390922 122 ntBASIC-1.75□□□□□ -2.69
VCPP55072 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.76□□□□□ -2.69
VCPP55072 MIR379-201ENST00000362218 67 ntBASIC-1.77□□□□□ -2.69
VCPP55072 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.77□□□□□ -2.69
VCPP55072 RNU6-871P-201ENST00000516122 100 ntBASIC-1.77□□□□□ -2.69
VCPP55072 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.78□□□□□ -2.69
VCPP55072 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.78□□□□□ -2.69
VCPP55072 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.78□□□□□ -2.69
VCPP55072 MT-TM-201ENST00000387377 68 ntBASIC-1.78□□□□□ -2.69
VCPP55072 MIR548X-201ENST00000580069 75 ntBASIC-1.78□□□□□ -2.69
VCPP55072 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.79□□□□□ -2.7
VCPP55072 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.79□□□□□ -2.7
VCPP55072 SNORD45.2-201ENST00000363552 72 ntBASIC-1.8□□□□□ -2.7
VCPP55072 RNU6-776P-201ENST00000364403 104 ntBASIC-1.81□□□□□ -2.7
VCPP55072 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.81□□□□□ -2.7
VCPP55072 MIR548H4-201ENST00000408689 111 ntBASIC-1.81□□□□□ -2.7
VCPP55072 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms