Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SNORD60-201ENST00000383903 83 ntBASIC-2.42□□□□□ -2.8
MSH6P52701 SNORD116.2-201ENST00000391251 93 ntBASIC-2.42□□□□□ -2.8
MSH6P52701 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.42□□□□□ -2.8
MSH6P52701 SNORA25.5-201ENST00000363782 126 ntBASIC-2.43□□□□□ -2.8
MSH6P52701 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.43□□□□□ -2.8
MSH6P52701 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.44□□□□□ -2.8
MSH6P52701 RNU6-122P-201ENST00000516818 107 ntBASIC-2.44□□□□□ -2.8
MSH6P52701 MIR5582-201ENST00000579697 68 ntBASIC-2.44□□□□□ -2.8
MSH6P52701 SNORA40B-201ENST00000385573 128 ntBASIC-2.46□□□□□ -2.8
MSH6P52701 MIR581-201ENST00000384895 96 ntBASIC-2.47□□□□□ -2.8
MSH6P52701 SNORA25.4-201ENST00000363666 124 ntBASIC-2.48□□□□□ -2.81
MSH6P52701 RNU6-361P-201ENST00000364454 107 ntBASIC-2.48□□□□□ -2.81
MSH6P52701 MIR548N-201ENST00000408742 75 ntBASIC-2.48□□□□□ -2.81
MSH6P52701 MIR548W-201ENST00000581970 74 ntBASIC-2.48□□□□□ -2.81
MSH6P52701 AC062037.1-201ENST00000605302 128 ntBASIC-2.48□□□□□ -2.81
MSH6P52701 MIR202-201ENST00000362219 110 ntBASIC-2.49□□□□□ -2.81
MSH6P52701 RNU6-649P-201ENST00000384463 107 ntBASIC-2.49□□□□□ -2.81
MSH6P52701 snoU13.10-201ENST00000459301 103 ntBASIC-2.49□□□□□ -2.81
MSH6P52701 MIR466-201ENST00000580653 84 ntBASIC-2.49□□□□□ -2.81
MSH6P52701 SNORA17.4-201ENST00000391287 132 ntBASIC-2.5□□□□□ -2.81
MSH6P52701 RNU7-119P-201ENST00000459279 63 ntBASIC-2.5□□□□□ -2.81
MSH6P52701 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.51□□□□□ -2.81
MSH6P52701 SNORD30.1-201ENST00000391309 70 ntBASIC-2.52□□□□□ -2.81
MSH6P52701 SNORA40.16-201ENST00000517238 121 ntBASIC-2.52□□□□□ -2.81
MSH6P52701 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.52□□□□□ -2.81
MSH6P52701 MIR4748-201ENST00000578076 82 ntBASIC-2.53□□□□□ -2.81
MSH6P52701 SNORD45.2-201ENST00000363552 72 ntBASIC-2.54□□□□□ -2.82
MSH6P52701 U2.22-201ENST00000636441 106 ntBASIC-2.54□□□□□ -2.82
MSH6P52701 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.55□□□□□ -2.82
MSH6P52701 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.55□□□□□ -2.82
MSH6P52701 RNU6-871P-201ENST00000516122 100 ntBASIC-2.56□□□□□ -2.82
MSH6P52701 MIR3202-2-201ENST00000635980 79 ntBASIC-2.56□□□□□ -2.82
MSH6P52701 RNU6-530P-201ENST00000391180 107 ntBASIC-2.57□□□□□ -2.82
MSH6P52701 MIR4511-201ENST00000582784 87 ntBASIC-2.57□□□□□ -2.82
MSH6P52701 RNU6-940P-201ENST00000363433 104 ntBASIC-2.58□□□□□ -2.82
MSH6P52701 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.59□□□□□ -2.82
MSH6P52701 AL451105.1-201ENST00000450005 189 ntBASIC-2.59□□□□□ -2.82
MSH6P52701 AC103706.3-201ENST00000636297 85 ntBASIC-2.59□□□□□ -2.82
MSH6P52701 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.6□□□□□ -2.83
MSH6P52701 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.6□□□□□ -2.83
MSH6P52701 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.61□□□□□ -2.83
MSH6P52701 U6.111-201ENST00000636093 83 ntBASIC-2.61□□□□□ -2.83
MSH6P52701 RNU6-539P-201ENST00000516665 103 ntBASIC-2.62□□□□□ -2.83
MSH6P52701 MIR3938-201ENST00000582157 103 ntBASIC-2.63□□□□□ -2.83
MSH6P52701 AC097484.2-201ENST00000509147 251 ntBASIC-2.64□□□□□ -2.83
MSH6P52701 RNU6-857P-201ENST00000515893 110 ntBASIC-2.64□□□□□ -2.83
MSH6P52701 MIR379-201ENST00000362218 67 ntBASIC-2.65□□□□□ -2.83
MSH6P52701 RNU6-230P-201ENST00000362457 104 ntBASIC-2.65□□□□□ -2.83
MSH6P52701 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.65□□□□□ -2.83
MSH6P52701 RNU6-279P-201ENST00000391297 101 ntBASIC-2.65□□□□□ -2.83
MSH6P52701 MIR1255A-201ENST00000408338 113 ntBASIC-2.65□□□□□ -2.83
MSH6P52701 SNORD73B-201ENST00000364394 72 ntBASIC-2.66□□□□□ -2.84
MSH6P52701 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.66□□□□□ -2.84
MSH6P52701 RNU6-573P-201ENST00000383938 106 ntBASIC-2.66□□□□□ -2.84
MSH6P52701 FTX_4.1-201ENST00000616291 147 ntBASIC-2.66□□□□□ -2.84
MSH6P52701 MIR4426-201ENST00000640330 63 ntBASIC-2.66□□□□□ -2.84
MSH6P52701 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.67□□□□□ -2.84
MSH6P52701 RNU6-176P-201ENST00000517196 105 ntBASIC-2.67□□□□□ -2.84
MSH6P52701 RNU6-419P-201ENST00000517030 63 ntBASIC-2.68□□□□□ -2.84
MSH6P52701 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.69□□□□□ -2.84
MSH6P52701 MIR4679-1-201ENST00000637619 75 ntBASIC-2.69□□□□□ -2.84
MSH6P52701 RNY4P9-201ENST00000363194 97 ntBASIC-2.7□□□□□ -2.84
MSH6P52701 RNU6-300P-201ENST00000459080 104 ntBASIC-2.71□□□□□ -2.84
MSH6P52701 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 RNU6-590P-201ENST00000365039 107 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.72□□□□□ -2.84
MSH6P52701 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 RNU6-68P-201ENST00000516576 104 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.72□□□□□ -2.84
MSH6P52701 RNA5SP170-201ENST00000517150 101 ntBASIC-2.73□□□□□ -2.85
MSH6P52701 RNU6-800P-201ENST00000384473 103 ntBASIC-2.74□□□□□ -2.85
MSH6P52701 RNY4P29-201ENST00000410801 97 ntBASIC-2.74□□□□□ -2.85
MSH6P52701 RNU6-803P-201ENST00000516034 102 ntBASIC-2.74□□□□□ -2.85
MSH6P52701 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.74□□□□□ -2.85
MSH6P52701 SNORA26.2-201ENST00000390922 122 ntBASIC-2.74□□□□□ -2.85
MSH6P52701 RNU6-912P-201ENST00000363800 104 ntBASIC-2.75□□□□□ -2.85
MSH6P52701 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.75□□□□□ -2.85
MSH6P52701 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.75□□□□□ -2.85
MSH6P52701 AC110620.1-201ENST00000416042 228 ntBASIC-2.75□□□□□ -2.85
MSH6P52701 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.75□□□□□ -2.85
MSH6P52701 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.76□□□□□ -2.85
MSH6P52701 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.77□□□□□ -2.85
MSH6P52701 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.78□□□□□ -2.85
MSH6P52701 RNU6-742P-201ENST00000365289 107 ntBASIC-2.81□□□□□ -2.86
MSH6P52701 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.82□□□□□ -2.86
MSH6P52701 SNORD78.1-201ENST00000390866 65 ntBASIC-2.82□□□□□ -2.86
MSH6P52701 RNU6-141P-201ENST00000410499 105 ntBASIC-2.82□□□□□ -2.86
MSH6P52701 SNORD113-3-201ENST00000364830 72 ntBASIC-2.83□□□□□ -2.86
MSH6P52701 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.84□□□□□ -2.86
MSH6P52701 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.84□□□□□ -2.86
MSH6P52701 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.85□□□□□ -2.87
MSH6P52701 MIR4662A-201ENST00000637499 67 ntBASIC-2.86□□□□□ -2.87
MSH6P52701 MIR548X-201ENST00000580069 75 ntBASIC-2.87□□□□□ -2.87
MSH6P52701 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.87□□□□□ -2.87
MSH6P52701 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.87□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms