Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.76□□□□□ -2.85
FREM3P0C091 RNU6-255P-201ENST00000516957 105 ntBASIC-2.77□□□□□ -2.85
FREM3P0C091 RNU6-822P-201ENST00000362707 106 ntBASIC-2.77□□□□□ -2.85
FREM3P0C091 SNORD114-13-201ENST00000364377 74 ntBASIC-2.77□□□□□ -2.85
FREM3P0C091 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.77□□□□□ -2.85
FREM3P0C091 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.77□□□□□ -2.85
FREM3P0C091 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.78□□□□□ -2.85
FREM3P0C091 RNU6-663P-201ENST00000391105 106 ntBASIC-2.78□□□□□ -2.85
FREM3P0C091 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.78□□□□□ -2.86
FREM3P0C091 MIR4503-201ENST00000582187 83 ntBASIC-2.78□□□□□ -2.86
FREM3P0C091 RNY1P5-201ENST00000383890 115 ntBASIC-2.79□□□□□ -2.86
FREM3P0C091 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.8□□□□□ -2.86
FREM3P0C091 RNU6-231P-201ENST00000517122 103 ntBASIC-2.8□□□□□ -2.86
FREM3P0C091 SNORD116-24-201ENST00000384549 92 ntBASIC-2.81□□□□□ -2.86
FREM3P0C091 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.81□□□□□ -2.86
FREM3P0C091 RNU6-346P-201ENST00000516288 111 ntBASIC-2.82□□□□□ -2.86
FREM3P0C091 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.83□□□□□ -2.86
FREM3P0C091 RNU7-171P-201ENST00000459581 62 ntBASIC-2.83□□□□□ -2.86
FREM3P0C091 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.86□□□□□ -2.87
FREM3P0C091 MIR3938-201ENST00000582157 103 ntBASIC-2.86□□□□□ -2.87
FREM3P0C091 MIR1254-1-201ENST00000408257 97 ntBASIC-2.86□□□□□ -2.87
FREM3P0C091 MIR4317-201ENST00000637586 65 ntBASIC-2.86□□□□□ -2.87
FREM3P0C091 AL359920.1-201ENST00000618332 176 ntBASIC-2.87□□□□□ -2.87
FREM3P0C091 RNA5SP224-201ENST00000365069 126 ntBASIC-2.87□□□□□ -2.87
FREM3P0C091 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.87□□□□□ -2.87
FREM3P0C091 SNORA25.4-201ENST00000363666 124 ntBASIC-2.88□□□□□ -2.87
FREM3P0C091 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.88□□□□□ -2.87
FREM3P0C091 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.88□□□□□ -2.87
FREM3P0C091 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.89□□□□□ -2.87
FREM3P0C091 AL451105.1-201ENST00000450005 189 ntBASIC-2.89□□□□□ -2.87
FREM3P0C091 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.89□□□□□ -2.87
FREM3P0C091 SNORD115-45-201ENST00000391078 81 ntBASIC-2.9□□□□□ -2.87
FREM3P0C091 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.91□□□□□ -2.88
FREM3P0C091 MIR5588-201ENST00000581890 63 ntBASIC-2.91□□□□□ -2.88
FREM3P0C091 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.92□□□□□ -2.88
FREM3P0C091 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.92□□□□□ -2.88
FREM3P0C091 RNU6-742P-201ENST00000365289 107 ntBASIC-2.93□□□□□ -2.88
FREM3P0C091 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.93□□□□□ -2.88
FREM3P0C091 RNU6-463P-201ENST00000384340 107 ntBASIC-2.93□□□□□ -2.88
FREM3P0C091 MIR4712-201ENST00000583750 82 ntBASIC-2.93□□□□□ -2.88
FREM3P0C091 AC062037.1-201ENST00000605302 128 ntBASIC-2.93□□□□□ -2.88
FREM3P0C091 RNU6-411P-201ENST00000384451 107 ntBASIC-2.94□□□□□ -2.88
FREM3P0C091 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.95□□□□□ -2.88
FREM3P0C091 RNU6-737P-201ENST00000365370 107 ntBASIC-2.95□□□□□ -2.88
FREM3P0C091 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.96□□□□□ -2.88
FREM3P0C091 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.96□□□□□ -2.88
FREM3P0C091 MIR4666B-201ENST00000578142 81 ntBASIC-2.96□□□□□ -2.88
FREM3P0C091 MIR4679-1-201ENST00000637619 75 ntBASIC-2.96□□□□□ -2.88
FREM3P0C091 MIR1245B-201ENST00000636115 69 ntBASIC-2.97□□□□□ -2.88
FREM3P0C091 MIR548X-201ENST00000580069 75 ntBASIC-2.98□□□□□ -2.89
FREM3P0C091 RNU6-1128P-201ENST00000362825 109 ntBASIC-3□□□□□ -2.89
FREM3P0C091 RNU6-640P-201ENST00000363693 105 ntBASIC-3□□□□□ -2.89
FREM3P0C091 RNU6-1154P-201ENST00000391001 104 ntBASIC-3□□□□□ -2.89
FREM3P0C091 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3□□□□□ -2.89
FREM3P0C091 Y_RNA.703-201ENST00000516846 111 ntBASIC-3.01□□□□□ -2.89
FREM3P0C091 MIR4511-201ENST00000582784 87 ntBASIC-3.01□□□□□ -2.89
FREM3P0C091 RNU6-634P-201ENST00000459134 106 ntBASIC-3.01□□□□□ -2.89
FREM3P0C091 RNU6-209P-201ENST00000384118 107 ntBASIC-3.02□□□□□ -2.89
FREM3P0C091 Y_RNA.464-201ENST00000384282 110 ntBASIC-3.02□□□□□ -2.89
FREM3P0C091 RNU6-22P-201ENST00000384355 107 ntBASIC-3.02□□□□□ -2.89
FREM3P0C091 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.02□□□□□ -2.89
FREM3P0C091 RNY4P30-201ENST00000410216 95 ntBASIC-3.02□□□□□ -2.89
FREM3P0C091 RNU6-665P-201ENST00000384639 107 ntBASIC-3.03□□□□□ -2.89
FREM3P0C091 MIR548H4-201ENST00000408689 111 ntBASIC-3.03□□□□□ -2.89
FREM3P0C091 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.04□□□□□ -2.9
FREM3P0C091 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.05□□□□□ -2.9
FREM3P0C091 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.05□□□□□ -2.9
FREM3P0C091 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.06□□□□□ -2.9
FREM3P0C091 RNU6-419P-201ENST00000517030 63 ntBASIC-3.06□□□□□ -2.9
FREM3P0C091 MIR488-201ENST00000365739 83 ntBASIC-3.07□□□□□ -2.9
FREM3P0C091 RNU6-687P-201ENST00000516443 89 ntBASIC-3.07□□□□□ -2.9
FREM3P0C091 AL365222.1-201ENST00000614661 98 ntBASIC-3.07□□□□□ -2.9
FREM3P0C091 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.07□□□□□ -2.9
FREM3P0C091 SNORD45C-201ENST00000383893 79 ntBASIC-3.08□□□□□ -2.9
FREM3P0C091 MIR124-1-201ENST00000385275 85 ntBASIC-3.08□□□□□ -2.9
FREM3P0C091 RNU6-787P-201ENST00000384032 107 ntBASIC-3.08□□□□□ -2.9
FREM3P0C091 MIR656-201ENST00000385224 78 ntBASIC-3.08□□□□□ -2.9
FREM3P0C091 MIR3134-201ENST00000579433 74 ntBASIC-3.09□□□□□ -2.9
FREM3P0C091 RNU6-32P-201ENST00000383948 107 ntBASIC-3.1□□□□□ -2.91
FREM3P0C091 RNU6-13P-201ENST00000384248 107 ntBASIC-3.1□□□□□ -2.91
FREM3P0C091 RNU6-12P-201ENST00000384604 107 ntBASIC-3.1□□□□□ -2.91
FREM3P0C091 RNU6-41P-201ENST00000384741 107 ntBASIC-3.1□□□□□ -2.91
FREM3P0C091 AP001094.1-201ENST00000579805 193 ntBASIC-3.11□□□□□ -2.91
FREM3P0C091 RNU6-854P-201ENST00000364036 107 ntBASIC-3.11□□□□□ -2.91
FREM3P0C091 MIR548AL-201ENST00000578416 97 ntBASIC-3.11□□□□□ -2.91
FREM3P0C091 IGLL4P-201ENST00000614590 133 ntBASIC-3.11□□□□□ -2.91
FREM3P0C091 RNU6-147P-201ENST00000383983 107 ntBASIC-3.12□□□□□ -2.91
FREM3P0C091 RNU6-1011P-201ENST00000384668 107 ntBASIC-3.13□□□□□ -2.91
FREM3P0C091 RNU6-808P-201ENST00000391233 108 ntBASIC-3.13□□□□□ -2.91
FREM3P0C091 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.14□□□□□ -2.91
FREM3P0C091 RNU6-539P-201ENST00000516665 103 ntBASIC-3.14□□□□□ -2.91
FREM3P0C091 U7.4-201ENST00000614961 63 ntBASIC-3.14□□□□□ -2.91
FREM3P0C091 MIR450A2-201ENST00000385022 100 ntBASIC-3.14□□□□□ -2.91
FREM3P0C091 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.14□□□□□ -2.91
FREM3P0C091 RNU6-122P-201ENST00000516818 107 ntBASIC-3.14□□□□□ -2.91
FREM3P0C091 RNU6-49P-201ENST00000384256 107 ntBASIC-3.15□□□□□ -2.91
FREM3P0C091 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.15□□□□□ -2.91
FREM3P0C091 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.15□□□□□ -2.91
FREM3P0C091 MIR548AH-201ENST00000637109 76 ntBASIC-3.15□□□□□ -2.91
FREM3P0C091 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.16□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms