Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL589823.1-201ENST00000429577 183 ntBASIC-5.51□□□□□ -3.29
CHD1O14646 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.51□□□□□ -3.29
CHD1O14646 MTATP8P1-201ENST00000467115 207 ntBASIC-5.51□□□□□ -3.29
CHD1O14646 AP000770.2-201ENST00000623694 100 ntBASIC-5.52□□□□□ -3.29
CHD1O14646 Y_RNA.273-201ENST00000364703 102 ntBASIC-5.53□□□□□ -3.29
CHD1O14646 MTND5P20-201ENST00000448677 143 ntBASIC-5.54□□□□□ -3.3
CHD1O14646 RNU6-687P-201ENST00000516443 89 ntBASIC-5.55□□□□□ -3.3
CHD1O14646 RNU6-257P-201ENST00000410238 98 ntBASIC-5.56□□□□□ -3.3
CHD1O14646 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-5.56□□□□□ -3.3
CHD1O14646 Y_RNA.720-201ENST00000517166 92 ntBASIC-5.57□□□□□ -3.3
CHD1O14646 MIR548H4-201ENST00000408689 111 ntBASIC-5.57□□□□□ -3.3
CHD1O14646 Y_RNA.15-201ENST00000362420 102 ntBASIC-5.59□□□□□ -3.3
CHD1O14646 Y_RNA.460-201ENST00000384255 102 ntBASIC-5.59□□□□□ -3.3
CHD1O14646 RNU6-804P-201ENST00000384286 107 ntBASIC-5.59□□□□□ -3.3
CHD1O14646 AL117187.1-201ENST00000555482 181 ntBASIC-5.6□□□□□ -3.31
CHD1O14646 RNU6-675P-201ENST00000384236 104 ntBASIC-5.61□□□□□ -3.31
CHD1O14646 RNU6-907P-201ENST00000390924 102 ntBASIC-5.61□□□□□ -3.31
CHD1O14646 RNU6-379P-201ENST00000363813 104 ntBASIC-5.62□□□□□ -3.31
CHD1O14646 Y_RNA.422-201ENST00000384054 114 ntBASIC-5.62□□□□□ -3.31
CHD1O14646 RNU6-663P-201ENST00000391105 106 ntBASIC-5.62□□□□□ -3.31
CHD1O14646 RNU6-255P-201ENST00000516957 105 ntBASIC-5.62□□□□□ -3.31
CHD1O14646 MIR3134-201ENST00000579433 74 ntBASIC-5.62□□□□□ -3.31
CHD1O14646 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.65□□□□□ -3.31
CHD1O14646 MIR548F4-201ENST00000408515 105 ntBASIC-5.67□□□□□ -3.32
CHD1O14646 AL353621.2-201ENST00000605340 133 ntBASIC-5.68□□□□□ -3.32
CHD1O14646 MALAT1.1-201ENST00000618249 95 ntBASIC-5.69□□□□□ -3.32
CHD1O14646 Y_RNA.149-201ENST00000363558 117 ntBASIC-5.71□□□□□ -3.32
CHD1O14646 SNORA25.4-201ENST00000363666 124 ntBASIC-5.71□□□□□ -3.32
CHD1O14646 SNORA40.13-201ENST00000516379 120 ntBASIC-5.71□□□□□ -3.32
CHD1O14646 MIR548AL-201ENST00000578416 97 ntBASIC-5.71□□□□□ -3.32
CHD1O14646 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.72□□□□□ -3.33
CHD1O14646 RNU6-979P-201ENST00000383896 107 ntBASIC-5.72□□□□□ -3.33
CHD1O14646 MTND5P41-201ENST00000517498 206 ntBASIC-5.72□□□□□ -3.33
CHD1O14646 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.74□□□□□ -3.33
CHD1O14646 MIR1302-3-201ENST00000408128 138 ntBASIC-5.74□□□□□ -3.33
CHD1O14646 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.74□□□□□ -3.33
CHD1O14646 MIR1245B-201ENST00000636115 69 ntBASIC-5.74□□□□□ -3.33
CHD1O14646 MIR4511-201ENST00000582784 87 ntBASIC-5.76□□□□□ -3.33
CHD1O14646 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.79□□□□□ -3.34
CHD1O14646 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.79□□□□□ -3.34
CHD1O14646 snoMBII-202.2-201ENST00000517263 86 ntBASIC-5.79□□□□□ -3.34
CHD1O14646 Y_RNA.406-201ENST00000383984 100 ntBASIC-5.81□□□□□ -3.34
CHD1O14646 AC008737.2-201ENST00000599446 118 ntBASIC-5.81□□□□□ -3.34
CHD1O14646 AC103706.3-201ENST00000636297 85 ntBASIC-5.82□□□□□ -3.34
CHD1O14646 RNU6-627P-201ENST00000364032 102 ntBASIC-5.82□□□□□ -3.34
CHD1O14646 RNU6-959P-201ENST00000384671 107 ntBASIC-5.82□□□□□ -3.34
CHD1O14646 RNU6-634P-201ENST00000459134 106 ntBASIC-5.82□□□□□ -3.34
CHD1O14646 MIR4712-201ENST00000583750 82 ntBASIC-5.82□□□□□ -3.34
CHD1O14646 AC090425.1-201ENST00000610007 140 ntBASIC-5.83□□□□□ -3.34
CHD1O14646 IGLL4P-201ENST00000614590 133 ntBASIC-5.84□□□□□ -3.34
CHD1O14646 RNU6-1160P-201ENST00000384546 104 ntBASIC-5.85□□□□□ -3.35
CHD1O14646 RNU6-200P-201ENST00000364743 107 ntBASIC-5.86□□□□□ -3.35
CHD1O14646 Y_RNA.702-201ENST00000516843 96 ntBASIC-5.86□□□□□ -3.35
CHD1O14646 AC044792.1-201ENST00000593294 196 ntBASIC-5.87□□□□□ -3.35
CHD1O14646 Y_RNA.489-201ENST00000384410 101 ntBASIC-5.88□□□□□ -3.35
CHD1O14646 SNORD30.1-201ENST00000391309 70 ntBASIC-5.88□□□□□ -3.35
CHD1O14646 U7.4-201ENST00000614961 63 ntBASIC-5.88□□□□□ -3.35
CHD1O14646 RNU6-844P-201ENST00000517175 102 ntBASIC-5.89□□□□□ -3.35
CHD1O14646 MIR3908-201ENST00000579798 126 ntBASIC-5.9□□□□□ -3.35
CHD1O14646 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.91□□□□□ -3.35
CHD1O14646 RNU7-171P-201ENST00000459581 62 ntBASIC-5.91□□□□□ -3.35
CHD1O14646 MIR5588-201ENST00000581890 63 ntBASIC-5.91□□□□□ -3.35
CHD1O14646 RNU4-33P-201ENST00000364316 85 ntBASIC-5.91□□□□□ -3.36
CHD1O14646 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.92□□□□□ -3.36
CHD1O14646 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.92□□□□□ -3.36
CHD1O14646 RNU6-808P-201ENST00000391233 108 ntBASIC-5.92□□□□□ -3.36
CHD1O14646 MTCYBP9-201ENST00000431021 303 ntBASIC-5.92□□□□□ -3.36
CHD1O14646 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-5.94□□□□□ -3.36
CHD1O14646 MIR568-201ENST00000385036 95 ntBASIC-5.95□□□□□ -3.36
CHD1O14646 MTCYBP6-201ENST00000441810 138 ntBASIC-5.95□□□□□ -3.36
CHD1O14646 RNU7-200P-201ENST00000516105 62 ntBASIC-5.95□□□□□ -3.36
CHD1O14646 AC026407.1-201ENST00000518369 204 ntBASIC-5.96□□□□□ -3.36
CHD1O14646 AL031737.1-201ENST00000450125 223 ntBASIC-5.97□□□□□ -3.37
CHD1O14646 MIR4679-1-201ENST00000637619 75 ntBASIC-5.97□□□□□ -3.37
CHD1O14646 SNORD116-14-201ENST00000383894 92 ntBASIC-5.98□□□□□ -3.37
CHD1O14646 SNORD116-17-201ENST00000383929 92 ntBASIC-5.98□□□□□ -3.37
CHD1O14646 SNORD116-15-201ENST00000384445 92 ntBASIC-5.98□□□□□ -3.37
CHD1O14646 SNORD116-19-201ENST00000384729 92 ntBASIC-5.98□□□□□ -3.37
CHD1O14646 AC110620.1-201ENST00000416042 228 ntBASIC-5.98□□□□□ -3.37
CHD1O14646 RNU6-1312P-201ENST00000362425 108 ntBASIC-6.01□□□□□ -3.37
CHD1O14646 MIR450A1-201ENST00000362262 91 ntBASIC-6.02□□□□□ -3.37
CHD1O14646 MIR606-201ENST00000384851 96 ntBASIC-6.02□□□□□ -3.37
CHD1O14646 RNU6-1024P-201ENST00000384199 107 ntBASIC-6.03□□□□□ -3.37
CHD1O14646 MIR488-201ENST00000365739 83 ntBASIC-6.05□□□□□ -3.38
CHD1O14646 RNU6-209P-201ENST00000384118 107 ntBASIC-6.05□□□□□ -3.38
CHD1O14646 RNU6-589P-201ENST00000516485 107 ntBASIC-6.05□□□□□ -3.38
CHD1O14646 Y_RNA.193-201ENST00000363979 102 ntBASIC-6.05□□□□□ -3.38
CHD1O14646 Y_RNA.535-201ENST00000384612 99 ntBASIC-6.05□□□□□ -3.38
CHD1O14646 Y_RNA.593-201ENST00000410292 98 ntBASIC-6.08□□□□□ -3.38
CHD1O14646 RNU6-738P-201ENST00000384531 106 ntBASIC-6.1□□□□□ -3.39
CHD1O14646 AL117351.2-201ENST00000513571 157 ntBASIC-6.11□□□□□ -3.39
CHD1O14646 MIR494-201ENST00000349529 81 ntBASIC-6.13□□□□□ -3.39
CHD1O14646 RNU6-539P-201ENST00000516665 103 ntBASIC-6.13□□□□□ -3.39
CHD1O14646 RNU6-346P-201ENST00000516288 111 ntBASIC-6.15□□□□□ -3.39
CHD1O14646 MIR548S-201ENST00000581352 82 ntBASIC-6.16□□□□□ -3.4
CHD1O14646 RNU6-871P-201ENST00000516122 100 ntBASIC-6.17□□□□□ -3.4
CHD1O14646 U6.111-201ENST00000636093 83 ntBASIC-6.17□□□□□ -3.4
CHD1O14646 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-6.19□□□□□ -3.4
CHD1O14646 RNU6-886P-201ENST00000384319 105 ntBASIC-6.19□□□□□ -3.4
CHD1O14646 RNU6-59P-201ENST00000384787 107 ntBASIC-6.19□□□□□ -3.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms