Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.77□□□□□ -3.17
HMGN4O00479 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.78□□□□□ -3.17
HMGN4O00479 SNORD115.2-201ENST00000391126 59 ntBASIC-4.78□□□□□ -3.17
HMGN4O00479 MTCYBP9-201ENST00000431021 303 ntBASIC-4.78□□□□□ -3.17
HMGN4O00479 RNU6-255P-201ENST00000516957 105 ntBASIC-4.79□□□□□ -3.18
HMGN4O00479 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.8□□□□□ -3.18
HMGN4O00479 RNU6-1160P-201ENST00000384546 104 ntBASIC-4.8□□□□□ -3.18
HMGN4O00479 AL353621.2-201ENST00000605340 133 ntBASIC-4.8□□□□□ -3.18
HMGN4O00479 RNU6-907P-201ENST00000390924 102 ntBASIC-4.82□□□□□ -3.18
HMGN4O00479 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.83□□□□□ -3.18
HMGN4O00479 SNORD116-14-201ENST00000383894 92 ntBASIC-4.83□□□□□ -3.18
HMGN4O00479 SNORD116-17-201ENST00000383929 92 ntBASIC-4.83□□□□□ -3.18
HMGN4O00479 SNORD116-15-201ENST00000384445 92 ntBASIC-4.83□□□□□ -3.18
HMGN4O00479 SNORD116-19-201ENST00000384729 92 ntBASIC-4.83□□□□□ -3.18
HMGN4O00479 MIR3134-201ENST00000579433 74 ntBASIC-4.83□□□□□ -3.18
HMGN4O00479 RNU6-940P-201ENST00000363433 104 ntBASIC-4.84□□□□□ -3.18
HMGN4O00479 RNU7-200P-201ENST00000516105 62 ntBASIC-4.84□□□□□ -3.18
HMGN4O00479 MIR568-201ENST00000385036 95 ntBASIC-4.85□□□□□ -3.19
HMGN4O00479 AC044792.1-201ENST00000593294 196 ntBASIC-4.85□□□□□ -3.19
HMGN4O00479 AC008737.2-201ENST00000599446 118 ntBASIC-4.85□□□□□ -3.19
HMGN4O00479 Y_RNA.535-201ENST00000384612 99 ntBASIC-4.86□□□□□ -3.19
HMGN4O00479 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.86□□□□□ -3.19
HMGN4O00479 RNY4P13-201ENST00000384284 96 ntBASIC-4.87□□□□□ -3.19
HMGN4O00479 RNU6-411P-201ENST00000384451 107 ntBASIC-4.87□□□□□ -3.19
HMGN4O00479 MIR3938-201ENST00000582157 103 ntBASIC-4.87□□□□□ -3.19
HMGN4O00479 MIR4712-201ENST00000583750 82 ntBASIC-4.87□□□□□ -3.19
HMGN4O00479 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.87□□□□□ -3.19
HMGN4O00479 SNORA40.13-201ENST00000516379 120 ntBASIC-4.88□□□□□ -3.19
HMGN4O00479 Y_RNA.489-201ENST00000384410 101 ntBASIC-4.89□□□□□ -3.19
HMGN4O00479 RNU6-844P-201ENST00000517175 102 ntBASIC-4.89□□□□□ -3.19
HMGN4O00479 MIR548S-201ENST00000581352 82 ntBASIC-4.89□□□□□ -3.19
HMGN4O00479 SNORA25.4-201ENST00000363666 124 ntBASIC-4.9□□□□□ -3.19
HMGN4O00479 RNU6-663P-201ENST00000391105 106 ntBASIC-4.91□□□□□ -3.2
HMGN4O00479 MIR548X-201ENST00000580069 75 ntBASIC-4.91□□□□□ -3.2
HMGN4O00479 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.92□□□□□ -3.2
HMGN4O00479 MIR1245B-201ENST00000636115 69 ntBASIC-4.92□□□□□ -3.2
HMGN4O00479 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.94□□□□□ -3.2
HMGN4O00479 Y_RNA.193-201ENST00000363979 102 ntBASIC-4.94□□□□□ -3.2
HMGN4O00479 MIR5588-201ENST00000581890 63 ntBASIC-4.96□□□□□ -3.2
HMGN4O00479 AL031737.1-201ENST00000450125 223 ntBASIC-4.97□□□□□ -3.21
HMGN4O00479 RNU6-422P-201ENST00000384632 107 ntBASIC-4.98□□□□□ -3.21
HMGN4O00479 MIR606-201ENST00000384851 96 ntBASIC-4.98□□□□□ -3.21
HMGN4O00479 RNU6-788P-201ENST00000390967 104 ntBASIC-4.98□□□□□ -3.21
HMGN4O00479 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.98□□□□□ -3.21
HMGN4O00479 RNU6-379P-201ENST00000363813 104 ntBASIC-4.99□□□□□ -3.21
HMGN4O00479 RNU6-776P-201ENST00000364403 104 ntBASIC-5□□□□□ -3.21
HMGN4O00479 RNU6-1022P-201ENST00000365049 104 ntBASIC-5□□□□□ -3.21
HMGN4O00479 RNU6-886P-201ENST00000384319 105 ntBASIC-5□□□□□ -3.21
HMGN4O00479 RNU6-634P-201ENST00000459134 106 ntBASIC-5□□□□□ -3.21
HMGN4O00479 RNU6-589P-201ENST00000516485 107 ntBASIC-5□□□□□ -3.21
HMGN4O00479 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.01□□□□□ -3.21
HMGN4O00479 RNU6-979P-201ENST00000383896 107 ntBASIC-5.01□□□□□ -3.21
HMGN4O00479 RNU6-346P-201ENST00000516288 111 ntBASIC-5.01□□□□□ -3.21
HMGN4O00479 IGLL4P-201ENST00000614590 133 ntBASIC-5.01□□□□□ -3.21
HMGN4O00479 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-5.02□□□□□ -3.21
HMGN4O00479 MIR4511-201ENST00000582784 87 ntBASIC-5.02□□□□□ -3.21
HMGN4O00479 MIR450A1-201ENST00000362262 91 ntBASIC-5.03□□□□□ -3.21
HMGN4O00479 MIR488-201ENST00000365739 83 ntBASIC-5.03□□□□□ -3.21
HMGN4O00479 MIR548H4-201ENST00000408689 111 ntBASIC-5.03□□□□□ -3.21
HMGN4O00479 RNY1P5-201ENST00000383890 115 ntBASIC-5.04□□□□□ -3.22
HMGN4O00479 AC103706.3-201ENST00000636297 85 ntBASIC-5.04□□□□□ -3.22
HMGN4O00479 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.05□□□□□ -3.22
HMGN4O00479 RNU7-171P-201ENST00000459581 62 ntBASIC-5.06□□□□□ -3.22
HMGN4O00479 RNU6-959P-201ENST00000384671 107 ntBASIC-5.07□□□□□ -3.22
HMGN4O00479 Y_RNA.593-201ENST00000410292 98 ntBASIC-5.07□□□□□ -3.22
HMGN4O00479 RNU6-1134P-201ENST00000365156 101 ntBASIC-5.08□□□□□ -3.22
HMGN4O00479 AL117351.2-201ENST00000513571 157 ntBASIC-5.08□□□□□ -3.22
HMGN4O00479 Y_RNA.506-201ENST00000384494 102 ntBASIC-5.09□□□□□ -3.22
HMGN4O00479 RNU6-738P-201ENST00000384531 106 ntBASIC-5.09□□□□□ -3.22
HMGN4O00479 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-5.1□□□□□ -3.23
HMGN4O00479 Y_RNA.61-201ENST00000362835 102 ntBASIC-5.11□□□□□ -3.23
HMGN4O00479 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.11□□□□□ -3.23
HMGN4O00479 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.11□□□□□ -3.23
HMGN4O00479 SNORD30.1-201ENST00000391309 70 ntBASIC-5.12□□□□□ -3.23
HMGN4O00479 Y_RNA.261-201ENST00000364631 102 ntBASIC-5.13□□□□□ -3.23
HMGN4O00479 MIR545-201ENST00000385085 106 ntBASIC-5.13□□□□□ -3.23
HMGN4O00479 MIR4503-201ENST00000582187 83 ntBASIC-5.13□□□□□ -3.23
HMGN4O00479 RNA5SP449-201ENST00000516871 130 ntBASIC-5.15□□□□□ -3.23
HMGN4O00479 RNU6-1212P-201ENST00000517023 104 ntBASIC-5.15□□□□□ -3.23
HMGN4O00479 MIR548AL-201ENST00000578416 97 ntBASIC-5.16□□□□□ -3.24
HMGN4O00479 Y_RNA.464-201ENST00000384282 110 ntBASIC-5.17□□□□□ -3.24
HMGN4O00479 U7.4-201ENST00000614961 63 ntBASIC-5.17□□□□□ -3.24
HMGN4O00479 RNU6-1056P-201ENST00000383996 107 ntBASIC-5.18□□□□□ -3.24
HMGN4O00479 RNU6-388P-201ENST00000517012 105 ntBASIC-5.18□□□□□ -3.24
HMGN4O00479 RNU6-389P-201ENST00000517048 105 ntBASIC-5.18□□□□□ -3.24
HMGN4O00479 RNU6-640P-201ENST00000363693 105 ntBASIC-5.19□□□□□ -3.24
HMGN4O00479 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.19□□□□□ -3.24
HMGN4O00479 MIR4679-1-201ENST00000637619 75 ntBASIC-5.21□□□□□ -3.24
HMGN4O00479 AC008267.6-201ENST00000441664 139 ntBASIC-5.22□□□□□ -3.25
HMGN4O00479 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.23□□□□□ -3.25
HMGN4O00479 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.25□□□□□ -3.25
HMGN4O00479 U6.111-201ENST00000636093 83 ntBASIC-5.25□□□□□ -3.25
HMGN4O00479 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.28□□□□□ -3.25
HMGN4O00479 AC110620.1-201ENST00000416042 228 ntBASIC-5.28□□□□□ -3.25
HMGN4O00479 RNU4-85P-201ENST00000364675 123 ntBASIC-5.29□□□□□ -3.26
HMGN4O00479 RNU6-539P-201ENST00000516665 103 ntBASIC-5.29□□□□□ -3.26
HMGN4O00479 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.3□□□□□ -3.26
HMGN4O00479 RNU6-871P-201ENST00000516122 100 ntBASIC-5.3□□□□□ -3.26
HMGN4O00479 MIR4666B-201ENST00000578142 81 ntBASIC-5.3□□□□□ -3.26
HMGN4O00479 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.31□□□□□ -3.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms