Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 Y_RNA.316-201ENST00000365118 111 ntBASIC-5.01□□□□□ -3.21
CHKB-CPT1BH3BT56 SNORD115.2-201ENST00000391126 59 ntBASIC-5.02□□□□□ -3.21
CHKB-CPT1BH3BT56 MIR1302-3-201ENST00000408128 138 ntBASIC-5.02□□□□□ -3.21
CHKB-CPT1BH3BT56 MTCYBP9-201ENST00000431021 303 ntBASIC-5.02□□□□□ -3.21
CHKB-CPT1BH3BT56 RNU6-907P-201ENST00000390924 102 ntBASIC-5.04□□□□□ -3.22
CHKB-CPT1BH3BT56 Y_RNA.722-201ENST00000517279 114 ntBASIC-5.04□□□□□ -3.22
CHKB-CPT1BH3BT56 AL353621.2-201ENST00000605340 133 ntBASIC-5.04□□□□□ -3.22
CHKB-CPT1BH3BT56 RNU6-255P-201ENST00000516957 105 ntBASIC-5.05□□□□□ -3.22
CHKB-CPT1BH3BT56 MIR3134-201ENST00000579433 74 ntBASIC-5.05□□□□□ -3.22
CHKB-CPT1BH3BT56 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-5.05□□□□□ -3.22
CHKB-CPT1BH3BT56 RNU6-1160P-201ENST00000384546 104 ntBASIC-5.06□□□□□ -3.22
CHKB-CPT1BH3BT56 RNU6-788P-201ENST00000390967 104 ntBASIC-5.06□□□□□ -3.22
CHKB-CPT1BH3BT56 Y_RNA.788-201ENST00000622394 112 ntBASIC-5.06□□□□□ -3.22
CHKB-CPT1BH3BT56 SNORD116-14-201ENST00000383894 92 ntBASIC-5.07□□□□□ -3.22
CHKB-CPT1BH3BT56 SNORD116-17-201ENST00000383929 92 ntBASIC-5.07□□□□□ -3.22
CHKB-CPT1BH3BT56 SNORD116-15-201ENST00000384445 92 ntBASIC-5.07□□□□□ -3.22
CHKB-CPT1BH3BT56 SNORD116-19-201ENST00000384729 92 ntBASIC-5.07□□□□□ -3.22
CHKB-CPT1BH3BT56 RNU7-200P-201ENST00000516105 62 ntBASIC-5.07□□□□□ -3.22
CHKB-CPT1BH3BT56 RNU6-940P-201ENST00000363433 104 ntBASIC-5.08□□□□□ -3.22
CHKB-CPT1BH3BT56 MIR4712-201ENST00000583750 82 ntBASIC-5.08□□□□□ -3.22
CHKB-CPT1BH3BT56 RNU6-411P-201ENST00000384451 107 ntBASIC-5.09□□□□□ -3.22
CHKB-CPT1BH3BT56 MIR568-201ENST00000385036 95 ntBASIC-5.09□□□□□ -3.22
CHKB-CPT1BH3BT56 MIR3938-201ENST00000582157 103 ntBASIC-5.09□□□□□ -3.22
CHKB-CPT1BH3BT56 RNU6-844P-201ENST00000517175 102 ntBASIC-5.11□□□□□ -3.23
CHKB-CPT1BH3BT56 SNORA25.4-201ENST00000363666 124 ntBASIC-5.12□□□□□ -3.23
CHKB-CPT1BH3BT56 Y_RNA.535-201ENST00000384612 99 ntBASIC-5.12□□□□□ -3.23
CHKB-CPT1BH3BT56 MIR548X-201ENST00000580069 75 ntBASIC-5.12□□□□□ -3.23
CHKB-CPT1BH3BT56 SNORA40.13-201ENST00000516379 120 ntBASIC-5.13□□□□□ -3.23
CHKB-CPT1BH3BT56 AC008737.2-201ENST00000599446 118 ntBASIC-5.13□□□□□ -3.23
CHKB-CPT1BH3BT56 RNU6-663P-201ENST00000391105 106 ntBASIC-5.14□□□□□ -3.23
CHKB-CPT1BH3BT56 snoMBII-202.2-201ENST00000517263 86 ntBASIC-5.14□□□□□ -3.23
CHKB-CPT1BH3BT56 AC044792.1-201ENST00000593294 196 ntBASIC-5.14□□□□□ -3.23
CHKB-CPT1BH3BT56 RNU6-1255P-201ENST00000363434 112 ntBASIC-5.16□□□□□ -3.24
CHKB-CPT1BH3BT56 Y_RNA.489-201ENST00000384410 101 ntBASIC-5.16□□□□□ -3.24
CHKB-CPT1BH3BT56 MIR1245B-201ENST00000636115 69 ntBASIC-5.16□□□□□ -3.24
CHKB-CPT1BH3BT56 MIR548S-201ENST00000581352 82 ntBASIC-5.17□□□□□ -3.24
CHKB-CPT1BH3BT56 MIR5588-201ENST00000581890 63 ntBASIC-5.18□□□□□ -3.24
CHKB-CPT1BH3BT56 Y_RNA.193-201ENST00000363979 102 ntBASIC-5.2□□□□□ -3.24
CHKB-CPT1BH3BT56 MIR548H4-201ENST00000408689 111 ntBASIC-5.2□□□□□ -3.24
CHKB-CPT1BH3BT56 RNU6-379P-201ENST00000363813 104 ntBASIC-5.21□□□□□ -3.24
CHKB-CPT1BH3BT56 RNY4P13-201ENST00000384284 96 ntBASIC-5.21□□□□□ -3.24
CHKB-CPT1BH3BT56 RNU6-422P-201ENST00000384632 107 ntBASIC-5.21□□□□□ -3.24
CHKB-CPT1BH3BT56 Y_RNA.709-201ENST00000516952 92 ntBASIC-5.21□□□□□ -3.24
CHKB-CPT1BH3BT56 AL031737.1-201ENST00000450125 223 ntBASIC-5.22□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-634P-201ENST00000459134 106 ntBASIC-5.22□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-589P-201ENST00000516485 107 ntBASIC-5.22□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-776P-201ENST00000364403 104 ntBASIC-5.23□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-1022P-201ENST00000365049 104 ntBASIC-5.23□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-979P-201ENST00000383896 107 ntBASIC-5.23□□□□□ -3.25
CHKB-CPT1BH3BT56 Y_RNA.73-201ENST00000362910 113 ntBASIC-5.24□□□□□ -3.25
CHKB-CPT1BH3BT56 MIR4511-201ENST00000582784 87 ntBASIC-5.24□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-1128P-201ENST00000362825 109 ntBASIC-5.25□□□□□ -3.25
CHKB-CPT1BH3BT56 MIR488-201ENST00000365739 83 ntBASIC-5.25□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-886P-201ENST00000384319 105 ntBASIC-5.25□□□□□ -3.25
CHKB-CPT1BH3BT56 MIR606-201ENST00000384851 96 ntBASIC-5.26□□□□□ -3.25
CHKB-CPT1BH3BT56 MIR450A1-201ENST00000362262 91 ntBASIC-5.27□□□□□ -3.25
CHKB-CPT1BH3BT56 Y_RNA.94-201ENST00000363068 106 ntBASIC-5.27□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-346P-201ENST00000516288 111 ntBASIC-5.27□□□□□ -3.25
CHKB-CPT1BH3BT56 RNY1P5-201ENST00000383890 115 ntBASIC-5.28□□□□□ -3.25
CHKB-CPT1BH3BT56 MIR545-201ENST00000385085 106 ntBASIC-5.28□□□□□ -3.25
CHKB-CPT1BH3BT56 AC103706.3-201ENST00000636297 85 ntBASIC-5.28□□□□□ -3.25
CHKB-CPT1BH3BT56 RNU6-959P-201ENST00000384671 107 ntBASIC-5.29□□□□□ -3.26
CHKB-CPT1BH3BT56 Y_RNA.593-201ENST00000410292 98 ntBASIC-5.29□□□□□ -3.26
CHKB-CPT1BH3BT56 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-5.29□□□□□ -3.26
CHKB-CPT1BH3BT56 RNU7-171P-201ENST00000459581 62 ntBASIC-5.29□□□□□ -3.26
CHKB-CPT1BH3BT56 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-5.29□□□□□ -3.26
CHKB-CPT1BH3BT56 IGLL4P-201ENST00000614590 133 ntBASIC-5.29□□□□□ -3.26
CHKB-CPT1BH3BT56 Y_RNA.506-201ENST00000384494 102 ntBASIC-5.31□□□□□ -3.26
CHKB-CPT1BH3BT56 RNU6-1326P-201ENST00000391262 107 ntBASIC-5.32□□□□□ -3.26
CHKB-CPT1BH3BT56 AL117351.2-201ENST00000513571 157 ntBASIC-5.34□□□□□ -3.26
CHKB-CPT1BH3BT56 RNU6-1134P-201ENST00000365156 101 ntBASIC-5.35□□□□□ -3.27
CHKB-CPT1BH3BT56 RNU6-738P-201ENST00000384531 106 ntBASIC-5.35□□□□□ -3.27
CHKB-CPT1BH3BT56 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-5.36□□□□□ -3.27
CHKB-CPT1BH3BT56 RNU6-1043P-201ENST00000410355 99 ntBASIC-5.36□□□□□ -3.27
CHKB-CPT1BH3BT56 RNA5SP449-201ENST00000516871 130 ntBASIC-5.37□□□□□ -3.27
CHKB-CPT1BH3BT56 RNU4-85P-201ENST00000364675 123 ntBASIC-5.38□□□□□ -3.27
CHKB-CPT1BH3BT56 RNU6-1212P-201ENST00000517023 104 ntBASIC-5.38□□□□□ -3.27
CHKB-CPT1BH3BT56 MIR548AL-201ENST00000578416 97 ntBASIC-5.38□□□□□ -3.27
CHKB-CPT1BH3BT56 Y_RNA.61-201ENST00000362835 102 ntBASIC-5.39□□□□□ -3.27
CHKB-CPT1BH3BT56 Y_RNA.261-201ENST00000364631 102 ntBASIC-5.39□□□□□ -3.27
CHKB-CPT1BH3BT56 SNORD30.1-201ENST00000391309 70 ntBASIC-5.39□□□□□ -3.27
CHKB-CPT1BH3BT56 Y_RNA.345-201ENST00000365384 92 ntBASIC-5.4□□□□□ -3.27
CHKB-CPT1BH3BT56 MIR4503-201ENST00000582187 83 ntBASIC-5.4□□□□□ -3.27
CHKB-CPT1BH3BT56 RNU6-640P-201ENST00000363693 105 ntBASIC-5.41□□□□□ -3.28
CHKB-CPT1BH3BT56 Y_RNA.464-201ENST00000384282 110 ntBASIC-5.43□□□□□ -3.28
CHKB-CPT1BH3BT56 U7.4-201ENST00000614961 63 ntBASIC-5.44□□□□□ -3.28
CHKB-CPT1BH3BT56 RNU6-1056P-201ENST00000383996 107 ntBASIC-5.45□□□□□ -3.28
CHKB-CPT1BH3BT56 RNU6-388P-201ENST00000517012 105 ntBASIC-5.46□□□□□ -3.28
CHKB-CPT1BH3BT56 RNU6-389P-201ENST00000517048 105 ntBASIC-5.46□□□□□ -3.28
CHKB-CPT1BH3BT56 RNU6-1204P-201ENST00000363948 107 ntBASIC-5.48□□□□□ -3.29
CHKB-CPT1BH3BT56 U6.111-201ENST00000636093 83 ntBASIC-5.48□□□□□ -3.29
CHKB-CPT1BH3BT56 MIR4679-1-201ENST00000637619 75 ntBASIC-5.48□□□□□ -3.29
CHKB-CPT1BH3BT56 AC008267.6-201ENST00000441664 139 ntBASIC-5.49□□□□□ -3.29
CHKB-CPT1BH3BT56 AC110620.1-201ENST00000416042 228 ntBASIC-5.52□□□□□ -3.29
CHKB-CPT1BH3BT56 Y_RNA.545-201ENST00000384652 105 ntBASIC-5.53□□□□□ -3.29
CHKB-CPT1BH3BT56 RNU6-808P-201ENST00000391233 108 ntBASIC-5.53□□□□□ -3.29
CHKB-CPT1BH3BT56 RNU6-539P-201ENST00000516665 103 ntBASIC-5.53□□□□□ -3.29
CHKB-CPT1BH3BT56 RNU6-1312P-201ENST00000362425 108 ntBASIC-5.54□□□□□ -3.3
CHKB-CPT1BH3BT56 MIR4666B-201ENST00000578142 81 ntBASIC-5.54□□□□□ -3.3
CHKB-CPT1BH3BT56 RNU6-1008P-201ENST00000384160 104 ntBASIC-5.55□□□□□ -3.3
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms