Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MIR4748-201ENST00000578076 82 ntBASIC-2.97□□□□□ -2.88
SMKR1H3BMG3 MIR379-201ENST00000362218 67 ntBASIC-2.98□□□□□ -2.89
SMKR1H3BMG3 SNORD30.1-201ENST00000391309 70 ntBASIC-2.99□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.99□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.99□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.99□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.99□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.99□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.99□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.225-201ENST00000364326 97 ntBASIC-3.01□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.01□□□□□ -2.89
SMKR1H3BMG3 MIR4426-201ENST00000640330 63 ntBASIC-3.01□□□□□ -2.89
SMKR1H3BMG3 RNU6-176P-201ENST00000517196 105 ntBASIC-3.02□□□□□ -2.89
SMKR1H3BMG3 RNU6-940P-201ENST00000363433 104 ntBASIC-3.03□□□□□ -2.89
SMKR1H3BMG3 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.03□□□□□ -2.89
SMKR1H3BMG3 AL603908.1-201ENST00000406098 201 ntBASIC-3.04□□□□□ -2.9
SMKR1H3BMG3 RNU6-871P-201ENST00000516122 100 ntBASIC-3.04□□□□□ -2.9
SMKR1H3BMG3 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.05□□□□□ -2.9
SMKR1H3BMG3 RNU6-300P-201ENST00000459080 104 ntBASIC-3.05□□□□□ -2.9
SMKR1H3BMG3 RNU6-119P-201ENST00000364882 107 ntBASIC-3.06□□□□□ -2.9
SMKR1H3BMG3 MIR4511-201ENST00000582784 87 ntBASIC-3.06□□□□□ -2.9
SMKR1H3BMG3 RNU6-590P-201ENST00000365039 107 ntBASIC-3.07□□□□□ -2.9
SMKR1H3BMG3 MIR1207-201ENST00000408249 87 ntBASIC-3.07□□□□□ -2.9
SMKR1H3BMG3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-3.07□□□□□ -2.9
SMKR1H3BMG3 AC103706.3-201ENST00000636297 85 ntBASIC-3.07□□□□□ -2.9
SMKR1H3BMG3 Y_RNA.369-201ENST00000365568 117 ntBASIC-3.08□□□□□ -2.9
SMKR1H3BMG3 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.08□□□□□ -2.9
SMKR1H3BMG3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.08□□□□□ -2.9
SMKR1H3BMG3 RNU6-912P-201ENST00000363800 104 ntBASIC-3.1□□□□□ -2.91
SMKR1H3BMG3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.1□□□□□ -2.91
SMKR1H3BMG3 MIR5582-201ENST00000579697 68 ntBASIC-3.1□□□□□ -2.91
SMKR1H3BMG3 AC062037.1-201ENST00000605302 128 ntBASIC-3.1□□□□□ -2.91
SMKR1H3BMG3 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.11□□□□□ -2.91
SMKR1H3BMG3 RNU6-406P-201ENST00000516470 107 ntBASIC-3.11□□□□□ -2.91
SMKR1H3BMG3 RNU6-68P-201ENST00000516576 104 ntBASIC-3.11□□□□□ -2.91
SMKR1H3BMG3 MIR3938-201ENST00000582157 103 ntBASIC-3.11□□□□□ -2.91
SMKR1H3BMG3 RNU6-419P-201ENST00000517030 63 ntBASIC-3.12□□□□□ -2.91
SMKR1H3BMG3 U6.111-201ENST00000636093 83 ntBASIC-3.12□□□□□ -2.91
SMKR1H3BMG3 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.13□□□□□ -2.91
SMKR1H3BMG3 RNU6-539P-201ENST00000516665 103 ntBASIC-3.13□□□□□ -2.91
SMKR1H3BMG3 MIR3202-2-201ENST00000635980 79 ntBASIC-3.13□□□□□ -2.91
SMKR1H3BMG3 RNY4P9-201ENST00000363194 97 ntBASIC-3.14□□□□□ -2.91
SMKR1H3BMG3 RNU6-1047P-201ENST00000364418 107 ntBASIC-3.14□□□□□ -2.91
SMKR1H3BMG3 SNORD113-3-201ENST00000364830 72 ntBASIC-3.14□□□□□ -2.91
SMKR1H3BMG3 MIR4679-1-201ENST00000637619 75 ntBASIC-3.14□□□□□ -2.91
SMKR1H3BMG3 MIR4723-201ENST00000585070 81 ntBASIC-3.15□□□□□ -2.91
SMKR1H3BMG3 MIR3139-201ENST00000579145 76 ntBASIC-3.17□□□□□ -2.92
SMKR1H3BMG3 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.17□□□□□ -2.92
SMKR1H3BMG3 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.2□□□□□ -2.92
SMKR1H3BMG3 TARS-215ENST00000626210 201 ntTSL 5 BASIC-3.2□□□□□ -2.92
SMKR1H3BMG3 Y_RNA.81-201ENST00000362997 102 ntBASIC-3.21□□□□□ -2.92
SMKR1H3BMG3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.21□□□□□ -2.92
SMKR1H3BMG3 RNU6-857P-201ENST00000515893 110 ntBASIC-3.22□□□□□ -2.92
SMKR1H3BMG3 RNU6-742P-201ENST00000365289 107 ntBASIC-3.24□□□□□ -2.93
SMKR1H3BMG3 Y_RNA.320-201ENST00000365144 102 ntBASIC-3.25□□□□□ -2.93
SMKR1H3BMG3 RNU6-279P-201ENST00000391297 101 ntBASIC-3.26□□□□□ -2.93
SMKR1H3BMG3 RNU6-800P-201ENST00000384473 103 ntBASIC-3.27□□□□□ -2.93
SMKR1H3BMG3 RNU6-141P-201ENST00000410499 105 ntBASIC-3.27□□□□□ -2.93
SMKR1H3BMG3 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.28□□□□□ -2.93
SMKR1H3BMG3 MIR1255A-201ENST00000408338 113 ntBASIC-3.28□□□□□ -2.93
SMKR1H3BMG3 MT-TM-201ENST00000387377 68 ntBASIC-3.29□□□□□ -2.94
SMKR1H3BMG3 AC110620.1-201ENST00000416042 228 ntBASIC-3.29□□□□□ -2.94
SMKR1H3BMG3 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.32□□□□□ -2.94
SMKR1H3BMG3 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.32□□□□□ -2.94
SMKR1H3BMG3 Y_RNA.475-201ENST00000384345 101 ntBASIC-3.32□□□□□ -2.94
SMKR1H3BMG3 RNU6-573P-201ENST00000383938 106 ntBASIC-3.33□□□□□ -2.94
SMKR1H3BMG3 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.33□□□□□ -2.94
SMKR1H3BMG3 MIR1254-1-201ENST00000408257 97 ntBASIC-3.33□□□□□ -2.94
SMKR1H3BMG3 RNU6-345P-201ENST00000517001 107 ntBASIC-3.33□□□□□ -2.94
SMKR1H3BMG3 SNORD73B-201ENST00000364394 72 ntBASIC-3.34□□□□□ -2.94
SMKR1H3BMG3 MIR548X-201ENST00000580069 75 ntBASIC-3.34□□□□□ -2.94
SMKR1H3BMG3 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.35□□□□□ -2.95
SMKR1H3BMG3 U2.22-201ENST00000636441 106 ntBASIC-3.35□□□□□ -2.95
SMKR1H3BMG3 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.37□□□□□ -2.95
SMKR1H3BMG3 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.38□□□□□ -2.95
SMKR1H3BMG3 MIR496-201ENST00000385226 102 ntBASIC-3.38□□□□□ -2.95
SMKR1H3BMG3 RNU6-822P-201ENST00000362707 106 ntBASIC-3.39□□□□□ -2.95
SMKR1H3BMG3 SNORA26.2-201ENST00000390922 122 ntBASIC-3.39□□□□□ -2.95
SMKR1H3BMG3 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.39□□□□□ -2.95
SMKR1H3BMG3 RNY4P29-201ENST00000410801 97 ntBASIC-3.4□□□□□ -2.95
SMKR1H3BMG3 SNORD54-201ENST00000459159 67 ntBASIC-3.4□□□□□ -2.95
SMKR1H3BMG3 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.4□□□□□ -2.95
SMKR1H3BMG3 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.42□□□□□ -2.96
SMKR1H3BMG3 RNA5SP170-201ENST00000517150 101 ntBASIC-3.43□□□□□ -2.96
SMKR1H3BMG3 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.45□□□□□ -2.96
SMKR1H3BMG3 Y_RNA.388-201ENST00000383919 113 ntBASIC-3.46□□□□□ -2.96
SMKR1H3BMG3 SNORD78.1-201ENST00000390866 65 ntBASIC-3.46□□□□□ -2.96
SMKR1H3BMG3 MIR4662A-201ENST00000637499 67 ntBASIC-3.47□□□□□ -2.96
SMKR1H3BMG3 RNU6-471P-201ENST00000383944 106 ntBASIC-3.48□□□□□ -2.97
SMKR1H3BMG3 MIR4317-201ENST00000637586 65 ntBASIC-3.49□□□□□ -2.97
SMKR1H3BMG3 Y_RNA.43-201ENST00000362670 111 ntBASIC-3.5□□□□□ -2.97
SMKR1H3BMG3 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.5□□□□□ -2.97
SMKR1H3BMG3 RNU6-1298P-201ENST00000362456 101 ntBASIC-3.51□□□□□ -2.97
SMKR1H3BMG3 RNU6-776P-201ENST00000364403 104 ntBASIC-3.51□□□□□ -2.97
SMKR1H3BMG3 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.51□□□□□ -2.97
SMKR1H3BMG3 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.51□□□□□ -2.97
SMKR1H3BMG3 RNA5SP225-201ENST00000410874 135 ntBASIC-3.51□□□□□ -2.97
SMKR1H3BMG3 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.52□□□□□ -2.97
SMKR1H3BMG3 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.52□□□□□ -2.97
SMKR1H3BMG3 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.52□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms