Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RNA5SP224-201ENST00000365069 126 ntBASIC-4.14□□□□□ -3.07
TRAV12-3A0A0B4J271 SNORD116-14-201ENST00000383894 92 ntBASIC-4.15□□□□□ -3.07
TRAV12-3A0A0B4J271 SNORD116-17-201ENST00000383929 92 ntBASIC-4.15□□□□□ -3.07
TRAV12-3A0A0B4J271 SNORD116-15-201ENST00000384445 92 ntBASIC-4.15□□□□□ -3.07
TRAV12-3A0A0B4J271 SNORD116-19-201ENST00000384729 92 ntBASIC-4.15□□□□□ -3.07
TRAV12-3A0A0B4J271 RNU6-419P-201ENST00000517030 63 ntBASIC-4.15□□□□□ -3.07
TRAV12-3A0A0B4J271 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.16□□□□□ -3.08
TRAV12-3A0A0B4J271 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.16□□□□□ -3.08
TRAV12-3A0A0B4J271 RNU6-907P-201ENST00000390924 102 ntBASIC-4.16□□□□□ -3.08
TRAV12-3A0A0B4J271 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-4.16□□□□□ -3.08
TRAV12-3A0A0B4J271 Y_RNA.61-201ENST00000362835 102 ntBASIC-4.17□□□□□ -3.08
TRAV12-3A0A0B4J271 SNORD45C-201ENST00000383893 79 ntBASIC-4.17□□□□□ -3.08
TRAV12-3A0A0B4J271 SNORA25.5-201ENST00000363782 126 ntBASIC-4.19□□□□□ -3.08
TRAV12-3A0A0B4J271 RNU6-738P-201ENST00000384531 106 ntBASIC-4.2□□□□□ -3.08
TRAV12-3A0A0B4J271 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.22□□□□□ -3.08
TRAV12-3A0A0B4J271 Y_RNA.316-201ENST00000365118 111 ntBASIC-4.22□□□□□ -3.08
TRAV12-3A0A0B4J271 RNU6-687P-201ENST00000516443 89 ntBASIC-4.23□□□□□ -3.09
TRAV12-3A0A0B4J271 RNU6-886P-201ENST00000384319 105 ntBASIC-4.24□□□□□ -3.09
TRAV12-3A0A0B4J271 RNU6-255P-201ENST00000516957 105 ntBASIC-4.24□□□□□ -3.09
TRAV12-3A0A0B4J271 SNORA40.13-201ENST00000516379 120 ntBASIC-4.25□□□□□ -3.09
TRAV12-3A0A0B4J271 RNU6-346P-201ENST00000516288 111 ntBASIC-4.27□□□□□ -3.09
TRAV12-3A0A0B4J271 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.27□□□□□ -3.09
TRAV12-3A0A0B4J271 MIR4503-201ENST00000582187 83 ntBASIC-4.27□□□□□ -3.09
TRAV12-3A0A0B4J271 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-4.28□□□□□ -3.09
TRAV12-3A0A0B4J271 RNU6-788P-201ENST00000390967 104 ntBASIC-4.29□□□□□ -3.1
TRAV12-3A0A0B4J271 RNU6-844P-201ENST00000517175 102 ntBASIC-4.29□□□□□ -3.1
TRAV12-3A0A0B4J271 MIR3134-201ENST00000579433 74 ntBASIC-4.29□□□□□ -3.1
TRAV12-3A0A0B4J271 RNU6-836P-201ENST00000362920 107 ntBASIC-4.3□□□□□ -3.1
TRAV12-3A0A0B4J271 RNY1P5-201ENST00000383890 115 ntBASIC-4.3□□□□□ -3.1
TRAV12-3A0A0B4J271 MIR4712-201ENST00000583750 82 ntBASIC-4.3□□□□□ -3.1
TRAV12-3A0A0B4J271 Y_RNA.788-201ENST00000622394 112 ntBASIC-4.3□□□□□ -3.1
TRAV12-3A0A0B4J271 MIR4801-201ENST00000582704 82 ntBASIC-4.31□□□□□ -3.1
TRAV12-3A0A0B4J271 RNU6-379P-201ENST00000363813 104 ntBASIC-4.32□□□□□ -3.1
TRAV12-3A0A0B4J271 Y_RNA.506-201ENST00000384494 102 ntBASIC-4.32□□□□□ -3.1
TRAV12-3A0A0B4J271 AL031737.1-201ENST00000450125 223 ntBASIC-4.32□□□□□ -3.1
TRAV12-3A0A0B4J271 RNU6-589P-201ENST00000516485 107 ntBASIC-4.32□□□□□ -3.1
TRAV12-3A0A0B4J271 snoMBII-202.2-201ENST00000517263 86 ntBASIC-4.32□□□□□ -3.1
TRAV12-3A0A0B4J271 Y_RNA.335-201ENST00000365299 96 ntBASIC-4.33□□□□□ -3.1
TRAV12-3A0A0B4J271 AL117351.2-201ENST00000513571 157 ntBASIC-4.34□□□□□ -3.1
TRAV12-3A0A0B4J271 SNORD115.2-201ENST00000391126 59 ntBASIC-4.35□□□□□ -3.11
TRAV12-3A0A0B4J271 MIR1245B-201ENST00000636115 69 ntBASIC-4.35□□□□□ -3.11
TRAV12-3A0A0B4J271 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-4.36□□□□□ -3.11
TRAV12-3A0A0B4J271 RNU6-388P-201ENST00000517012 105 ntBASIC-4.36□□□□□ -3.11
TRAV12-3A0A0B4J271 RNU6-389P-201ENST00000517048 105 ntBASIC-4.36□□□□□ -3.11
TRAV12-3A0A0B4J271 MIR450A1-201ENST00000362262 91 ntBASIC-4.37□□□□□ -3.11
TRAV12-3A0A0B4J271 MIR5588-201ENST00000581890 63 ntBASIC-4.37□□□□□ -3.11
TRAV12-3A0A0B4J271 RNU6-940P-201ENST00000363433 104 ntBASIC-4.38□□□□□ -3.11
TRAV12-3A0A0B4J271 MIR488-201ENST00000365739 83 ntBASIC-4.38□□□□□ -3.11
TRAV12-3A0A0B4J271 RNU6-1212P-201ENST00000517023 104 ntBASIC-4.38□□□□□ -3.11
TRAV12-3A0A0B4J271 MIR4317-201ENST00000637586 65 ntBASIC-4.38□□□□□ -3.11
TRAV12-3A0A0B4J271 Y_RNA.464-201ENST00000384282 110 ntBASIC-4.39□□□□□ -3.11
TRAV12-3A0A0B4J271 RNU6-411P-201ENST00000384451 107 ntBASIC-4.39□□□□□ -3.11
TRAV12-3A0A0B4J271 RNU6-422P-201ENST00000384632 107 ntBASIC-4.39□□□□□ -3.11
TRAV12-3A0A0B4J271 MIR3938-201ENST00000582157 103 ntBASIC-4.39□□□□□ -3.11
TRAV12-3A0A0B4J271 SNORA25.4-201ENST00000363666 124 ntBASIC-4.4□□□□□ -3.11
TRAV12-3A0A0B4J271 RNU6-979P-201ENST00000383896 107 ntBASIC-4.4□□□□□ -3.11
TRAV12-3A0A0B4J271 RNU6-663P-201ENST00000391105 106 ntBASIC-4.4□□□□□ -3.11
TRAV12-3A0A0B4J271 Y_RNA.73-201ENST00000362910 113 ntBASIC-4.41□□□□□ -3.12
TRAV12-3A0A0B4J271 Y_RNA.261-201ENST00000364631 102 ntBASIC-4.41□□□□□ -3.12
TRAV12-3A0A0B4J271 RNY4P13-201ENST00000384284 96 ntBASIC-4.41□□□□□ -3.12
TRAV12-3A0A0B4J271 IGLL4P-201ENST00000614590 133 ntBASIC-4.42□□□□□ -3.12
TRAV12-3A0A0B4J271 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.43□□□□□ -3.12
TRAV12-3A0A0B4J271 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.43□□□□□ -3.12
TRAV12-3A0A0B4J271 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.44□□□□□ -3.12
TRAV12-3A0A0B4J271 Y_RNA.593-201ENST00000410292 98 ntBASIC-4.44□□□□□ -3.12
TRAV12-3A0A0B4J271 Y_RNA.94-201ENST00000363068 106 ntBASIC-4.46□□□□□ -3.12
TRAV12-3A0A0B4J271 RNU6-634P-201ENST00000459134 106 ntBASIC-4.46□□□□□ -3.12
TRAV12-3A0A0B4J271 RNU7-171P-201ENST00000459581 62 ntBASIC-4.46□□□□□ -3.12
TRAV12-3A0A0B4J271 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-4.46□□□□□ -3.12
TRAV12-3A0A0B4J271 RNU6-1134P-201ENST00000365156 101 ntBASIC-4.47□□□□□ -3.13
TRAV12-3A0A0B4J271 MIR548X-201ENST00000580069 75 ntBASIC-4.47□□□□□ -3.13
TRAV12-3A0A0B4J271 RNU6-1056P-201ENST00000383996 107 ntBASIC-4.49□□□□□ -3.13
TRAV12-3A0A0B4J271 MIR545-201ENST00000385085 106 ntBASIC-4.49□□□□□ -3.13
TRAV12-3A0A0B4J271 AC008267.6-201ENST00000441664 139 ntBASIC-4.51□□□□□ -3.13
TRAV12-3A0A0B4J271 MIR4511-201ENST00000582784 87 ntBASIC-4.51□□□□□ -3.13
TRAV12-3A0A0B4J271 RNU6-640P-201ENST00000363693 105 ntBASIC-4.52□□□□□ -3.13
TRAV12-3A0A0B4J271 RNU6-327P-201ENST00000516270 127 ntBASIC-4.53□□□□□ -3.13
TRAV12-3A0A0B4J271 AC103706.3-201ENST00000636297 85 ntBASIC-4.54□□□□□ -3.14
TRAV12-3A0A0B4J271 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.55□□□□□ -3.14
TRAV12-3A0A0B4J271 RNU6-959P-201ENST00000384671 107 ntBASIC-4.55□□□□□ -3.14
TRAV12-3A0A0B4J271 RNU6-1043P-201ENST00000410355 99 ntBASIC-4.55□□□□□ -3.14
TRAV12-3A0A0B4J271 RNA5SP449-201ENST00000516871 130 ntBASIC-4.55□□□□□ -3.14
TRAV12-3A0A0B4J271 RNU4-85P-201ENST00000364675 123 ntBASIC-4.56□□□□□ -3.14
TRAV12-3A0A0B4J271 MT-TG-201ENST00000387429 68 ntBASIC-4.56□□□□□ -3.14
TRAV12-3A0A0B4J271 MIR548H4-201ENST00000408689 111 ntBASIC-4.57□□□□□ -3.14
TRAV12-3A0A0B4J271 RNU6-776P-201ENST00000364403 104 ntBASIC-4.58□□□□□ -3.14
TRAV12-3A0A0B4J271 RNU6-1022P-201ENST00000365049 104 ntBASIC-4.58□□□□□ -3.14
TRAV12-3A0A0B4J271 SNORD30.1-201ENST00000391309 70 ntBASIC-4.59□□□□□ -3.14
TRAV12-3A0A0B4J271 RNU6-463P-201ENST00000384340 107 ntBASIC-4.6□□□□□ -3.15
TRAV12-3A0A0B4J271 U7.4-201ENST00000614961 63 ntBASIC-4.61□□□□□ -3.15
TRAV12-3A0A0B4J271 AL365222.1-201ENST00000614661 98 ntBASIC-4.63□□□□□ -3.15
TRAV12-3A0A0B4J271 RNU6-32P-201ENST00000383948 107 ntBASIC-4.65□□□□□ -3.15
TRAV12-3A0A0B4J271 RNU6-13P-201ENST00000384248 107 ntBASIC-4.65□□□□□ -3.15
TRAV12-3A0A0B4J271 RNU6-12P-201ENST00000384604 107 ntBASIC-4.65□□□□□ -3.15
TRAV12-3A0A0B4J271 RNU6-41P-201ENST00000384741 107 ntBASIC-4.65□□□□□ -3.15
TRAV12-3A0A0B4J271 RNU6-1045P-201ENST00000516321 107 ntBASIC-4.65□□□□□ -3.15
TRAV12-3A0A0B4J271 MIR4666B-201ENST00000578142 81 ntBASIC-4.67□□□□□ -3.16
TRAV12-3A0A0B4J271 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.69□□□□□ -3.16
TRAV12-3A0A0B4J271 U6.111-201ENST00000636093 83 ntBASIC-4.7□□□□□ -3.16
TRAV12-3A0A0B4J271 RNU6-242P-201ENST00000384359 107 ntBASIC-4.71□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms