Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.5□□□□□ -2.81
TRAV39A0A0B4J263 RNU6-530P-201ENST00000391180 107 ntBASIC-2.5□□□□□ -2.81
TRAV39A0A0B4J263 MIR664B-201ENST00000626756 61 ntBASIC-2.5□□□□□ -2.81
TRAV39A0A0B4J263 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 RNU7-119P-201ENST00000459279 63 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 SNORA40.16-201ENST00000517238 121 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 U2.22-201ENST00000636441 106 ntBASIC-2.51□□□□□ -2.81
TRAV39A0A0B4J263 MIR548N-201ENST00000408742 75 ntBASIC-2.52□□□□□ -2.81
TRAV39A0A0B4J263 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.52□□□□□ -2.81
TRAV39A0A0B4J263 Y_RNA.81-201ENST00000362997 102 ntBASIC-2.53□□□□□ -2.81
TRAV39A0A0B4J263 RNU6-871P-201ENST00000516122 100 ntBASIC-2.54□□□□□ -2.82
TRAV39A0A0B4J263 MIR3139-201ENST00000579145 76 ntBASIC-2.54□□□□□ -2.82
TRAV39A0A0B4J263 SNORD45.2-201ENST00000363552 72 ntBASIC-2.55□□□□□ -2.82
TRAV39A0A0B4J263 RNU6-361P-201ENST00000364454 107 ntBASIC-2.55□□□□□ -2.82
TRAV39A0A0B4J263 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.55□□□□□ -2.82
TRAV39A0A0B4J263 MIR3202-2-201ENST00000635980 79 ntBASIC-2.57□□□□□ -2.82
TRAV39A0A0B4J263 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-940P-201ENST00000363433 104 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 AL451105.1-201ENST00000450005 189 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 MIR4511-201ENST00000582784 87 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 U6.111-201ENST00000636093 83 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 MIR4426-201ENST00000640330 63 ntBASIC-2.6□□□□□ -2.83
TRAV39A0A0B4J263 MT-TM-201ENST00000387377 68 ntBASIC-2.61□□□□□ -2.83
TRAV39A0A0B4J263 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.61□□□□□ -2.83
TRAV39A0A0B4J263 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.62□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-857P-201ENST00000515893 110 ntBASIC-2.62□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-194P-201ENST00000363862 105 ntBASIC-2.63□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-573P-201ENST00000383938 106 ntBASIC-2.63□□□□□ -2.83
TRAV39A0A0B4J263 MIR1255A-201ENST00000408338 113 ntBASIC-2.63□□□□□ -2.83
TRAV39A0A0B4J263 AC103706.3-201ENST00000636297 85 ntBASIC-2.63□□□□□ -2.83
TRAV39A0A0B4J263 SNORD73B-201ENST00000364394 72 ntBASIC-2.64□□□□□ -2.83
TRAV39A0A0B4J263 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.64□□□□□ -2.83
TRAV39A0A0B4J263 AC097484.2-201ENST00000509147 251 ntBASIC-2.64□□□□□ -2.83
TRAV39A0A0B4J263 RNU6-539P-201ENST00000516665 103 ntBASIC-2.65□□□□□ -2.83
TRAV39A0A0B4J263 MIR466-201ENST00000580653 84 ntBASIC-2.65□□□□□ -2.83
TRAV39A0A0B4J263 MIR3938-201ENST00000582157 103 ntBASIC-2.65□□□□□ -2.83
TRAV39A0A0B4J263 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.66□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-300P-201ENST00000459080 104 ntBASIC-2.66□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.67□□□□□ -2.84
TRAV39A0A0B4J263 MIR4679-1-201ENST00000637619 75 ntBASIC-2.68□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.69□□□□□ -2.84
TRAV39A0A0B4J263 MIR379-201ENST00000362218 67 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 RNA5SP405-201ENST00000363059 114 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 SNORA26.2-201ENST00000390922 122 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 RNA5SP170-201ENST00000517150 101 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 FTX_4.1-201ENST00000616291 147 ntBASIC-2.7□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-590P-201ENST00000365039 107 ntBASIC-2.71□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.71□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-279P-201ENST00000391297 101 ntBASIC-2.71□□□□□ -2.84
TRAV39A0A0B4J263 RNY4-201ENST00000516507 96 ntBASIC-2.71□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-912P-201ENST00000363800 104 ntBASIC-2.72□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-800P-201ENST00000384473 103 ntBASIC-2.72□□□□□ -2.84
TRAV39A0A0B4J263 RNY4P29-201ENST00000410801 97 ntBASIC-2.72□□□□□ -2.84
TRAV39A0A0B4J263 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.72□□□□□ -2.84
TRAV39A0A0B4J263 RNU6-176P-201ENST00000517196 105 ntBASIC-2.73□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-419P-201ENST00000517030 63 ntBASIC-2.74□□□□□ -2.85
TRAV39A0A0B4J263 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.74□□□□□ -2.85
TRAV39A0A0B4J263 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.75□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.75□□□□□ -2.85
TRAV39A0A0B4J263 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.75□□□□□ -2.85
TRAV39A0A0B4J263 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.76□□□□□ -2.85
TRAV39A0A0B4J263 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.77□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 SNORD113-3-201ENST00000364830 72 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 RNA5SP225-201ENST00000410874 135 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-68P-201ENST00000516576 104 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 MIR4748-201ENST00000578076 82 ntBASIC-2.78□□□□□ -2.85
TRAV39A0A0B4J263 RNU6-742P-201ENST00000365289 107 ntBASIC-2.79□□□□□ -2.86
TRAV39A0A0B4J263 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.79□□□□□ -2.86
TRAV39A0A0B4J263 SNORD78.1-201ENST00000390866 65 ntBASIC-2.81□□□□□ -2.86
TRAV39A0A0B4J263 AC110620.1-201ENST00000416042 228 ntBASIC-2.81□□□□□ -2.86
TRAV39A0A0B4J263 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.82□□□□□ -2.86
TRAV39A0A0B4J263 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-2.83□□□□□ -2.86
TRAV39A0A0B4J263 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.86□□□□□ -2.87
TRAV39A0A0B4J263 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.86□□□□□ -2.87
TRAV39A0A0B4J263 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.88□□□□□ -2.87
TRAV39A0A0B4J263 RNY4P9-201ENST00000363194 97 ntBASIC-2.88□□□□□ -2.87
TRAV39A0A0B4J263 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.88□□□□□ -2.87
TRAV39A0A0B4J263 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 RNU6-776P-201ENST00000364403 104 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 MIR1254-1-201ENST00000408257 97 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 MIR4662A-201ENST00000637499 67 ntBASIC-2.89□□□□□ -2.87
TRAV39A0A0B4J263 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.9□□□□□ -2.87
TRAV39A0A0B4J263 MIR548X-201ENST00000580069 75 ntBASIC-2.91□□□□□ -2.88
TRAV39A0A0B4J263 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.93□□□□□ -2.88
TRAV39A0A0B4J263 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.93□□□□□ -2.88
TRAV39A0A0B4J263 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.94□□□□□ -2.88
TRAV39A0A0B4J263 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.95□□□□□ -2.88
TRAV39A0A0B4J263 Y_RNA.386-201ENST00000383913 105 ntBASIC-2.96□□□□□ -2.88
TRAV39A0A0B4J263 RNU6-141P-201ENST00000410499 105 ntBASIC-2.96□□□□□ -2.88
Retrieved 100 of 98,524 protein–RNA pairs in 849 ms