Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC062037.1-201ENST00000605302 128 ntBASIC-1.91□□□□□ -2.72
SSX3Q99909 MIR6502-201ENST00000617296 76 ntBASIC-1.91□□□□□ -2.72
SSX3Q99909 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.92□□□□□ -2.72
SSX3Q99909 RNU6-172P-201ENST00000411000 93 ntBASIC-1.92□□□□□ -2.72
SSX3Q99909 MIR4520-1-201ENST00000582609 70 ntBASIC-1.92□□□□□ -2.72
SSX3Q99909 RNU6-92P-201ENST00000605893 104 ntBASIC-1.92□□□□□ -2.72
SSX3Q99909 RNU6-79P-201ENST00000362511 107 ntBASIC-1.93□□□□□ -2.72
SSX3Q99909 MIR579-201ENST00000385221 98 ntBASIC-1.94□□□□□ -2.72
SSX3Q99909 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.94□□□□□ -2.72
SSX3Q99909 MIR5591-201ENST00000578248 65 ntBASIC-1.94□□□□□ -2.72
SSX3Q99909 MIR1246-201ENST00000636535 73 ntBASIC-1.94□□□□□ -2.72
SSX3Q99909 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.95□□□□□ -2.72
SSX3Q99909 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
SSX3Q99909 MIR4770-201ENST00000579149 58 ntBASIC-1.97□□□□□ -2.72
SSX3Q99909 RNU6-634P-201ENST00000459134 106 ntBASIC-1.99□□□□□ -2.73
SSX3Q99909 SNORD63.2-201ENST00000516303 64 ntBASIC-1.99□□□□□ -2.73
SSX3Q99909 MIR3202-2-201ENST00000635980 79 ntBASIC-1.99□□□□□ -2.73
SSX3Q99909 Y_RNA.443-201ENST00000384135 111 ntBASIC-2□□□□□ -2.73
SSX3Q99909 RNU6-663P-201ENST00000391105 106 ntBASIC-2□□□□□ -2.73
SSX3Q99909 AC120024.2-201ENST00000576526 175 ntBASIC-2□□□□□ -2.73
SSX3Q99909 MIR7978-201ENST00000636158 59 ntBASIC-2□□□□□ -2.73
SSX3Q99909 RNY4P27-201ENST00000363341 96 ntBASIC-2.01□□□□□ -2.73
SSX3Q99909 RNU6-258P-201ENST00000390884 101 ntBASIC-2.01□□□□□ -2.73
SSX3Q99909 RNA5SP170-201ENST00000517150 101 ntBASIC-2.01□□□□□ -2.73
SSX3Q99909 SNORA27.2-201ENST00000363365 126 ntBASIC-2.02□□□□□ -2.73
SSX3Q99909 RNU6-226P-201ENST00000363778 107 ntBASIC-2.02□□□□□ -2.73
SSX3Q99909 RNU6-669P-201ENST00000365575 107 ntBASIC-2.02□□□□□ -2.73
SSX3Q99909 SNORD60.1-201ENST00000362451 73 ntBASIC-2.03□□□□□ -2.73
SSX3Q99909 RNU6-540P-201ENST00000384622 101 ntBASIC-2.03□□□□□ -2.73
SSX3Q99909 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.04□□□□□ -2.74
SSX3Q99909 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.04□□□□□ -2.74
SSX3Q99909 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.04□□□□□ -2.74
SSX3Q99909 SNORD73B-201ENST00000364394 72 ntBASIC-2.06□□□□□ -2.74
SSX3Q99909 MIR125B1-201ENST00000385236 88 ntBASIC-2.06□□□□□ -2.74
SSX3Q99909 MIR7110-201ENST00000612638 86 ntBASIC-2.06□□□□□ -2.74
SSX3Q99909 RNU7-160P-201ENST00000516660 62 ntBASIC-2.07□□□□□ -2.74
SSX3Q99909 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.07□□□□□ -2.74
SSX3Q99909 RNU6-563P-201ENST00000364872 108 ntBASIC-2.08□□□□□ -2.74
SSX3Q99909 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.08□□□□□ -2.74
SSX3Q99909 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.09□□□□□ -2.74
SSX3Q99909 SNORD30.1-201ENST00000391309 70 ntBASIC-2.09□□□□□ -2.74
SSX3Q99909 RNU6-871P-201ENST00000516122 100 ntBASIC-2.09□□□□□ -2.74
SSX3Q99909 RNU6-523P-201ENST00000516304 54 ntBASIC-2.09□□□□□ -2.74
SSX3Q99909 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.1□□□□□ -2.75
SSX3Q99909 SNORA25.4-201ENST00000363666 124 ntBASIC-2.1□□□□□ -2.75
SSX3Q99909 RNU6-695P-201ENST00000391157 104 ntBASIC-2.1□□□□□ -2.75
SSX3Q99909 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.11□□□□□ -2.75
SSX3Q99909 SNORA26.2-201ENST00000390922 122 ntBASIC-2.11□□□□□ -2.75
SSX3Q99909 RNU6-231P-201ENST00000517122 103 ntBASIC-2.11□□□□□ -2.75
SSX3Q99909 RNU6-573P-201ENST00000383938 106 ntBASIC-2.12□□□□□ -2.75
SSX3Q99909 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.13□□□□□ -2.75
SSX3Q99909 SNORA25.5-201ENST00000363782 126 ntBASIC-2.13□□□□□ -2.75
SSX3Q99909 MIR1255A-201ENST00000408338 113 ntBASIC-2.13□□□□□ -2.75
SSX3Q99909 MIR548H1-201ENST00000408610 102 ntBASIC-2.13□□□□□ -2.75
SSX3Q99909 RNY4P29-201ENST00000410801 97 ntBASIC-2.13□□□□□ -2.75
SSX3Q99909 RNU6-857P-201ENST00000515893 110 ntBASIC-2.13□□□□□ -2.75
SSX3Q99909 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.14□□□□□ -2.75
SSX3Q99909 RNU6-828P-201ENST00000364876 107 ntBASIC-2.14□□□□□ -2.75
SSX3Q99909 SNORD116.2-201ENST00000391251 93 ntBASIC-2.14□□□□□ -2.75
SSX3Q99909 RNU6-228P-201ENST00000362700 106 ntBASIC-2.15□□□□□ -2.75
SSX3Q99909 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.15□□□□□ -2.75
SSX3Q99909 RNU6-810P-201ENST00000364001 107 ntBASIC-2.15□□□□□ -2.75
SSX3Q99909 RNA5SP86-201ENST00000390869 98 ntBASIC-2.16□□□□□ -2.76
SSX3Q99909 RNU6-279P-201ENST00000391297 101 ntBASIC-2.16□□□□□ -2.76
SSX3Q99909 RNU6-974P-201ENST00000384099 108 ntBASIC-2.17□□□□□ -2.76
SSX3Q99909 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.17□□□□□ -2.76
SSX3Q99909 RNU6-122P-201ENST00000516818 107 ntBASIC-2.17□□□□□ -2.76
SSX3Q99909 AC005520.4-201ENST00000604337 90 ntBASIC-2.17□□□□□ -2.76
SSX3Q99909 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.18□□□□□ -2.76
SSX3Q99909 RNU6-649P-201ENST00000384463 107 ntBASIC-2.18□□□□□ -2.76
SSX3Q99909 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.19□□□□□ -2.76
SSX3Q99909 AC013734.1-201ENST00000619329 111 ntBASIC-2.19□□□□□ -2.76
SSX3Q99909 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.2□□□□□ -2.76
SSX3Q99909 RNY3P8-201ENST00000411366 126 ntBASIC-2.2□□□□□ -2.76
SSX3Q99909 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.21□□□□□ -2.76
SSX3Q99909 RNU6-520P-201ENST00000384717 104 ntBASIC-2.22□□□□□ -2.76
SSX3Q99909 RNU7-119P-201ENST00000459279 63 ntBASIC-2.22□□□□□ -2.76
SSX3Q99909 RNU6-539P-201ENST00000516665 103 ntBASIC-2.22□□□□□ -2.76
SSX3Q99909 U6.111-201ENST00000636093 83 ntBASIC-2.22□□□□□ -2.76
SSX3Q99909 U6.97-201ENST00000636904 101 ntBASIC-2.22□□□□□ -2.76
SSX3Q99909 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.23□□□□□ -2.77
SSX3Q99909 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.23□□□□□ -2.77
SSX3Q99909 SNORA40B-201ENST00000385573 128 ntBASIC-2.23□□□□□ -2.77
SSX3Q99909 MIR4511-201ENST00000582784 87 ntBASIC-2.23□□□□□ -2.77
SSX3Q99909 MIR3123-201ENST00000583417 75 ntBASIC-2.23□□□□□ -2.77
SSX3Q99909 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.24□□□□□ -2.77
SSX3Q99909 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.24□□□□□ -2.77
SSX3Q99909 AC103706.3-201ENST00000636297 85 ntBASIC-2.24□□□□□ -2.77
SSX3Q99909 RNU6-940P-201ENST00000363433 104 ntBASIC-2.26□□□□□ -2.77
SSX3Q99909 SNORD78.1-201ENST00000390866 65 ntBASIC-2.26□□□□□ -2.77
SSX3Q99909 RNU6-983P-201ENST00000516004 103 ntBASIC-2.26□□□□□ -2.77
SSX3Q99909 MIR4679-1-201ENST00000637619 75 ntBASIC-2.26□□□□□ -2.77
SSX3Q99909 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.27□□□□□ -2.77
SSX3Q99909 RNU6-841P-201ENST00000383872 107 ntBASIC-2.27□□□□□ -2.77
SSX3Q99909 RNU6-119P-201ENST00000364882 107 ntBASIC-2.3□□□□□ -2.78
SSX3Q99909 SNORD60-201ENST00000383903 83 ntBASIC-2.3□□□□□ -2.78
SSX3Q99909 MIR487B-201ENST00000385021 84 ntBASIC-2.3□□□□□ -2.78
SSX3Q99909 SNORA40.16-201ENST00000517238 121 ntBASIC-2.3□□□□□ -2.78
SSX3Q99909 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.31□□□□□ -2.78
SSX3Q99909 RNA5SP225-201ENST00000410874 135 ntBASIC-2.31□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms