Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.23□□□□□ -2.93
COL12A1Q99715 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.24□□□□□ -2.93
COL12A1Q99715 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.24□□□□□ -2.93
COL12A1Q99715 MTND2P14-201ENST00000482139 351 ntBASIC-3.24□□□□□ -2.93
COL12A1Q99715 SNORD58B-201ENST00000607313 66 ntBASIC-3.24□□□□□ -2.93
COL12A1Q99715 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.24□□□□□ -2.93
COL12A1Q99715 MIR548BB-201ENST00000626714 66 ntBASIC-3.24□□□□□ -2.93
COL12A1Q99715 RNU6-1188P-201ENST00000363795 107 ntBASIC-3.25□□□□□ -2.93
COL12A1Q99715 Y_RNA.579-201ENST00000390939 94 ntBASIC-3.25□□□□□ -2.93
COL12A1Q99715 RNU6-675P-201ENST00000384236 104 ntBASIC-3.25□□□□□ -2.93
COL12A1Q99715 SNORD58C-201ENST00000365223 64 ntBASIC-3.25□□□□□ -2.93
COL12A1Q99715 RNU6-1143P-201ENST00000516125 104 ntBASIC-3.25□□□□□ -2.93
COL12A1Q99715 RNU6-471P-201ENST00000383944 106 ntBASIC-3.26□□□□□ -2.93
COL12A1Q99715 Y_RNA.545-201ENST00000384652 105 ntBASIC-3.26□□□□□ -2.93
COL12A1Q99715 MIR590-201ENST00000385008 97 ntBASIC-3.26□□□□□ -2.93
COL12A1Q99715 RNU6-1085P-201ENST00000363576 107 ntBASIC-3.27□□□□□ -2.93
COL12A1Q99715 RNU6-844P-201ENST00000517175 102 ntBASIC-3.28□□□□□ -2.93
COL12A1Q99715 RNU6-915P-201ENST00000364943 103 ntBASIC-3.28□□□□□ -2.93
COL12A1Q99715 RNU7-171P-201ENST00000459581 62 ntBASIC-3.28□□□□□ -2.93
COL12A1Q99715 RNU6-772P-201ENST00000516042 105 ntBASIC-3.28□□□□□ -2.93
COL12A1Q99715 MIR6863-201ENST00000636112 90 ntBASIC-3.28□□□□□ -2.93
COL12A1Q99715 RNU6-109P-201ENST00000516364 107 ntBASIC-3.28□□□□□ -2.94
COL12A1Q99715 RNU6-184P-201ENST00000516514 107 ntBASIC-3.28□□□□□ -2.94
COL12A1Q99715 U6.111-201ENST00000636093 83 ntBASIC-3.29□□□□□ -2.94
COL12A1Q99715 RNU6-936P-201ENST00000384005 107 ntBASIC-3.29□□□□□ -2.94
COL12A1Q99715 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 MIR5690-201ENST00000583739 73 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 Y_RNA.88-201ENST00000363029 99 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 MIR559-201ENST00000385188 96 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 Y_RNA.619-201ENST00000410951 90 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 AC040904.1-201ENST00000590850 223 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 RNY3P10-201ENST00000384764 102 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 SNORD116.3-201ENST00000517176 78 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 AC090582.1-201ENST00000636321 199 ntBASIC-3.3□□□□□ -2.94
COL12A1Q99715 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.32□□□□□ -2.94
COL12A1Q99715 Y_RNA.26-201ENST00000362539 101 ntBASIC-3.33□□□□□ -2.94
COL12A1Q99715 SNORA40.13-201ENST00000516379 120 ntBASIC-3.33□□□□□ -2.94
COL12A1Q99715 RNU6-724P-201ENST00000390958 105 ntBASIC-3.33□□□□□ -2.94
COL12A1Q99715 MIR4528-201ENST00000577763 90 ntBASIC-3.33□□□□□ -2.94
COL12A1Q99715 RNU6-908P-201ENST00000410160 94 ntBASIC-3.35□□□□□ -2.95
COL12A1Q99715 MIR4712-201ENST00000583750 82 ntBASIC-3.35□□□□□ -2.95
COL12A1Q99715 Y_RNA.496-201ENST00000384444 101 ntBASIC-3.35□□□□□ -2.95
COL12A1Q99715 AP003461.1-201ENST00000528866 78 ntBASIC-3.35□□□□□ -2.95
COL12A1Q99715 AL157777.2-201ENST00000258070 137 ntBASIC-3.36□□□□□ -2.95
COL12A1Q99715 RNU7-197P-201ENST00000458836 62 ntBASIC-3.36□□□□□ -2.95
COL12A1Q99715 Y_RNA.661-201ENST00000516003 99 ntBASIC-3.36□□□□□ -2.95
COL12A1Q99715 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.37□□□□□ -2.95
COL12A1Q99715 SNORA26.2-201ENST00000390922 122 ntBASIC-3.37□□□□□ -2.95
COL12A1Q99715 SNORA26.8-201ENST00000391306 124 ntBASIC-3.37□□□□□ -2.95
COL12A1Q99715 Y_RNA.632-201ENST00000459189 102 ntBASIC-3.37□□□□□ -2.95
COL12A1Q99715 AC109635.3-201ENST00000529536 185 ntBASIC-3.37□□□□□ -2.95
COL12A1Q99715 Y_RNA.516-201ENST00000384541 124 ntBASIC-3.37□□□□□ -2.95
COL12A1Q99715 MIR1245B-201ENST00000636115 69 ntBASIC-3.37□□□□□ -2.95
COL12A1Q99715 RNU7-107P-201ENST00000459121 61 ntBASIC-3.38□□□□□ -2.95
COL12A1Q99715 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.38□□□□□ -2.95
COL12A1Q99715 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-3.39□□□□□ -2.95
COL12A1Q99715 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-3.39□□□□□ -2.95
COL12A1Q99715 RNU6-314P-201ENST00000516574 104 ntBASIC-3.39□□□□□ -2.95
COL12A1Q99715 RNU6-988P-201ENST00000519081 107 ntBASIC-3.4□□□□□ -2.95
COL12A1Q99715 AF246928.1-201ENST00000623768 87 ntBASIC-3.4□□□□□ -2.95
COL12A1Q99715 RNU6-918P-201ENST00000391219 106 ntBASIC-3.41□□□□□ -2.96
COL12A1Q99715 AC079150.2-201ENST00000443733 78 ntBASIC-3.41□□□□□ -2.96
COL12A1Q99715 MIR4666B-201ENST00000578142 81 ntBASIC-3.41□□□□□ -2.96
COL12A1Q99715 RNU6-242P-201ENST00000384359 107 ntBASIC-3.41□□□□□ -2.96
COL12A1Q99715 SNORD116-21-201ENST00000384507 92 ntBASIC-3.41□□□□□ -2.96
COL12A1Q99715 U6.95-201ENST00000636931 70 ntBASIC-3.41□□□□□ -2.96
COL12A1Q99715 RNU6-483P-201ENST00000384088 108 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 MTND5P22-201ENST00000458380 195 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 Y_RNA.693-201ENST00000516641 110 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 MIR4643-201ENST00000577473 78 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 RNU6-906P-201ENST00000384700 70 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 MIR1302-11-201ENST00000408051 138 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 MIR1302-9-201ENST00000408365 138 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 MIR1302-10-201ENST00000408734 138 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 MIR3671-201ENST00000580455 88 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 MIR1302-2-201ENST00000607096 138 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 MTND4LP32-201ENST00000636111 270 ntBASIC-3.42□□□□□ -2.96
COL12A1Q99715 DLEU2_1.1-201ENST00000612089 120 ntBASIC-3.43□□□□□ -2.96
COL12A1Q99715 RNU6-614P-201ENST00000384369 107 ntBASIC-3.43□□□□□ -2.96
COL12A1Q99715 U6.59-201ENST00000615686 107 ntBASIC-3.43□□□□□ -2.96
COL12A1Q99715 MALAT1.1-201ENST00000618249 95 ntBASIC-3.44□□□□□ -2.96
COL12A1Q99715 RNU6-823P-201ENST00000391042 103 ntBASIC-3.44□□□□□ -2.96
COL12A1Q99715 MIR1252-201ENST00000408861 65 ntBASIC-3.45□□□□□ -2.96
COL12A1Q99715 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.45□□□□□ -2.96
COL12A1Q99715 MIR5588-201ENST00000581890 63 ntBASIC-3.45□□□□□ -2.96
COL12A1Q99715 SNORD113-6-201ENST00000363345 75 ntBASIC-3.46□□□□□ -2.96
COL12A1Q99715 IGLL4P-201ENST00000614590 133 ntBASIC-3.46□□□□□ -2.96
COL12A1Q99715 Y_RNA.252-201ENST00000364556 101 ntBASIC-3.46□□□□□ -2.96
COL12A1Q99715 RNU6-1276P-201ENST00000365372 104 ntBASIC-3.47□□□□□ -2.96
COL12A1Q99715 RN7SKP298-201ENST00000515950 94 ntBASIC-3.47□□□□□ -2.96
COL12A1Q99715 RNU4-71P-201ENST00000516258 113 ntBASIC-3.47□□□□□ -2.96
COL12A1Q99715 MIR4760-201ENST00000585040 80 ntBASIC-3.47□□□□□ -2.96
COL12A1Q99715 Y_RNA.276-201ENST00000364732 109 ntBASIC-3.47□□□□□ -2.97
COL12A1Q99715 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.47□□□□□ -2.97
COL12A1Q99715 RNU6-499P-201ENST00000365615 107 ntBASIC-3.48□□□□□ -2.97
COL12A1Q99715 RNU4-14P-201ENST00000410858 122 ntBASIC-3.48□□□□□ -2.97
COL12A1Q99715 AL031737.1-201ENST00000450125 223 ntBASIC-3.48□□□□□ -2.97
COL12A1Q99715 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-3.49□□□□□ -2.97
COL12A1Q99715 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.49□□□□□ -2.97
COL12A1Q99715 RNU6-147P-201ENST00000383983 107 ntBASIC-3.5□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 246.6 ms