Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORD115-31-201ENST00000365318 82 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 AC044792.1-201ENST00000593294 196 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-497P-201ENST00000365316 104 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.58□□□□□ -2.5
SYNE1Q8NF91 RNU6-810P-201ENST00000364001 107 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-974P-201ENST00000384099 108 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 SNORD60-201ENST00000383903 83 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 SNORD116.2-201ENST00000391251 93 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-590P-201ENST00000365039 107 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-315P-201ENST00000362666 107 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 AP001318.4-201ENST00000616637 121 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 SNORD18C-201ENST00000362704 69 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 MIR569-201ENST00000385228 96 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-345P-201ENST00000517001 107 ntBASIC-0.59□□□□□ -2.5
SYNE1Q8NF91 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 AL031737.1-201ENST00000450125 223 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.6□□□□□ -2.5
SYNE1Q8NF91 RNU6-22P-201ENST00000384355 107 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 SNORA63.4-201ENST00000362763 126 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-1044P-201ENST00000384755 107 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-327P-201ENST00000516270 127 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 SNORD63.2-201ENST00000516303 64 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 AC013734.1-201ENST00000619329 111 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 MIR4317-201ENST00000637586 65 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-330P-201ENST00000363015 107 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 MIR548N-201ENST00000408742 75 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 SNORD113-3-201ENST00000364830 72 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU7-119P-201ENST00000459279 63 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-219P-201ENST00000364728 107 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 AL731768.1-201ENST00000603124 139 ntBASIC-0.6□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNY1P5-201ENST00000383890 115 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 SNORA40B-201ENST00000385573 128 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-162P-201ENST00000516228 103 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-267P-201ENST00000516714 103 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-176P-201ENST00000517196 105 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-886P-201ENST00000384319 105 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-520P-201ENST00000384717 104 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU7-151P-201ENST00000516930 53 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 MIR4426-201ENST00000640330 63 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6-663P-201ENST00000391105 106 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.61□□□□□ -2.51
SYNE1Q8NF91 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNY3P8-201ENST00000411366 126 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU6-589P-201ENST00000516485 107 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU6-979P-201ENST00000383896 107 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 SNORA17.4-201ENST00000391287 132 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 SNORD60.1-201ENST00000362451 73 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 MIR581-201ENST00000384895 96 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 MIR7978-201ENST00000636158 59 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU6-172P-201ENST00000411000 93 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU6-822P-201ENST00000362707 106 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 RNU7-171P-201ENST00000459581 62 ntBASIC-0.62□□□□□ -2.51
SYNE1Q8NF91 AC008267.6-201ENST00000441664 139 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 SNORD45.2-201ENST00000363552 72 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-737P-201ENST00000365370 107 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-255P-201ENST00000516957 105 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 SNORD114-13-201ENST00000364377 74 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 MIR548AI-201ENST00000579940 88 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-640P-201ENST00000363693 105 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-196P-201ENST00000384315 107 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-257P-201ENST00000410238 98 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 MIR154-201ENST00000385243 84 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 RNU6-912P-201ENST00000363800 104 ntBASIC-0.63□□□□□ -2.51
SYNE1Q8NF91 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 RNY4P13-201ENST00000384284 96 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 RNU6-70P-201ENST00000516438 60 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 RNU6-411P-201ENST00000384451 107 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 SNORD45A-201ENST00000384512 84 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 MIR363-201ENST00000384840 75 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 MIR4503-201ENST00000582187 83 ntBASIC-0.64□□□□□ -2.51
SYNE1Q8NF91 MIR664A-201ENST00000626086 82 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 MIR450A1-201ENST00000362262 91 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-147P-201ENST00000383983 107 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-419P-201ENST00000517030 63 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 MIR548BB-201ENST00000626714 66 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-854P-201ENST00000364036 107 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.65□□□□□ -2.51
SYNE1Q8NF91 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms