Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MIR579-201ENST00000385221 98 ntBASIC-1.85□□□□□ -2.71
ZIC4Q8N9L1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.85□□□□□ -2.71
ZIC4Q8N9L1 RNU6-172P-201ENST00000411000 93 ntBASIC-1.85□□□□□ -2.71
ZIC4Q8N9L1 RNU6-315P-201ENST00000362666 107 ntBASIC-1.86□□□□□ -2.71
ZIC4Q8N9L1 RNU6-755P-201ENST00000364400 103 ntBASIC-1.86□□□□□ -2.71
ZIC4Q8N9L1 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.86□□□□□ -2.71
ZIC4Q8N9L1 SNORD116-24-201ENST00000384549 92 ntBASIC-1.86□□□□□ -2.71
ZIC4Q8N9L1 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.86□□□□□ -2.71
ZIC4Q8N9L1 RNU6-523P-201ENST00000516304 54 ntBASIC-1.86□□□□□ -2.71
ZIC4Q8N9L1 RNU6-640P-201ENST00000363693 105 ntBASIC-1.87□□□□□ -2.71
ZIC4Q8N9L1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.87□□□□□ -2.71
ZIC4Q8N9L1 RNY3P8-201ENST00000411366 126 ntBASIC-1.87□□□□□ -2.71
ZIC4Q8N9L1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.87□□□□□ -2.71
ZIC4Q8N9L1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.88□□□□□ -2.71
ZIC4Q8N9L1 RNU6-380P-201ENST00000410207 107 ntBASIC-1.88□□□□□ -2.71
ZIC4Q8N9L1 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.88□□□□□ -2.71
ZIC4Q8N9L1 RNU6-844P-201ENST00000517175 102 ntBASIC-1.88□□□□□ -2.71
ZIC4Q8N9L1 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.89□□□□□ -2.71
ZIC4Q8N9L1 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.89□□□□□ -2.71
ZIC4Q8N9L1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.9□□□□□ -2.71
ZIC4Q8N9L1 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.9□□□□□ -2.71
ZIC4Q8N9L1 MIR548W-201ENST00000581970 74 ntBASIC-1.9□□□□□ -2.71
ZIC4Q8N9L1 U6.97-201ENST00000636904 101 ntBASIC-1.9□□□□□ -2.71
ZIC4Q8N9L1 RNU6-209P-201ENST00000384118 107 ntBASIC-1.91□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.92□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.92□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.92□□□□□ -2.72
ZIC4Q8N9L1 RNU6-22P-201ENST00000384355 107 ntBASIC-1.92□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.92□□□□□ -2.72
ZIC4Q8N9L1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.92□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.93□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.93□□□□□ -2.72
ZIC4Q8N9L1 snoU13.10-201ENST00000459301 103 ntBASIC-1.93□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.94□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.94□□□□□ -2.72
ZIC4Q8N9L1 FTX_4.1-201ENST00000616291 147 ntBASIC-1.94□□□□□ -2.72
ZIC4Q8N9L1 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.94□□□□□ -2.72
ZIC4Q8N9L1 RNY4P9-201ENST00000363194 97 ntBASIC-1.95□□□□□ -2.72
ZIC4Q8N9L1 MIR581-201ENST00000384895 96 ntBASIC-1.95□□□□□ -2.72
ZIC4Q8N9L1 RNU7-160P-201ENST00000516660 62 ntBASIC-1.96□□□□□ -2.72
ZIC4Q8N9L1 RNU6-789P-201ENST00000517105 102 ntBASIC-1.96□□□□□ -2.72
ZIC4Q8N9L1 MIR548AI-201ENST00000579940 88 ntBASIC-1.96□□□□□ -2.72
ZIC4Q8N9L1 MIR5588-201ENST00000581890 63 ntBASIC-1.96□□□□□ -2.72
ZIC4Q8N9L1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.96□□□□□ -2.72
ZIC4Q8N9L1 SNORD18C-201ENST00000362704 69 ntBASIC-1.97□□□□□ -2.72
ZIC4Q8N9L1 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.97□□□□□ -2.72
ZIC4Q8N9L1 RNU6-979P-201ENST00000383896 107 ntBASIC-1.97□□□□□ -2.72
ZIC4Q8N9L1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.97□□□□□ -2.72
ZIC4Q8N9L1 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 MIR154-201ENST00000385243 84 ntBASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 RNU6-803P-201ENST00000516034 102 ntBASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 RNU6-70P-201ENST00000516438 60 ntBASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 MIR4712-201ENST00000583750 82 ntBASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 RNU6-92P-201ENST00000605893 104 ntBASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.98□□□□□ -2.73
ZIC4Q8N9L1 RNU6-32P-201ENST00000383948 107 ntBASIC-1.99□□□□□ -2.73
ZIC4Q8N9L1 RNU6-13P-201ENST00000384248 107 ntBASIC-1.99□□□□□ -2.73
ZIC4Q8N9L1 RNU6-12P-201ENST00000384604 107 ntBASIC-1.99□□□□□ -2.73
ZIC4Q8N9L1 RNU6-520P-201ENST00000384717 104 ntBASIC-1.99□□□□□ -2.73
ZIC4Q8N9L1 RNU6-41P-201ENST00000384741 107 ntBASIC-1.99□□□□□ -2.73
ZIC4Q8N9L1 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.99□□□□□ -2.73
ZIC4Q8N9L1 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.99□□□□□ -2.73
ZIC4Q8N9L1 RNU6-542P-201ENST00000516405 103 ntBASIC-1.99□□□□□ -2.73
ZIC4Q8N9L1 RNU6-895P-201ENST00000384125 103 ntBASIC-2□□□□□ -2.73
ZIC4Q8N9L1 SNORD60.1-201ENST00000362451 73 ntBASIC-2.01□□□□□ -2.73
ZIC4Q8N9L1 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.01□□□□□ -2.73
ZIC4Q8N9L1 MIR548N-201ENST00000408742 75 ntBASIC-2.01□□□□□ -2.73
ZIC4Q8N9L1 RNU6-141P-201ENST00000410499 105 ntBASIC-2.01□□□□□ -2.73
ZIC4Q8N9L1 RNU6-313P-201ENST00000516317 112 ntBASIC-2.01□□□□□ -2.73
ZIC4Q8N9L1 RNU6-828P-201ENST00000364876 107 ntBASIC-2.02□□□□□ -2.73
ZIC4Q8N9L1 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.02□□□□□ -2.73
ZIC4Q8N9L1 RNU6-147P-201ENST00000383983 107 ntBASIC-2.02□□□□□ -2.73
ZIC4Q8N9L1 RNU7-171P-201ENST00000459581 62 ntBASIC-2.02□□□□□ -2.73
ZIC4Q8N9L1 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.02□□□□□ -2.73
ZIC4Q8N9L1 MIR7110-201ENST00000612638 86 ntBASIC-2.02□□□□□ -2.73
ZIC4Q8N9L1 MIR1245B-201ENST00000636115 69 ntBASIC-2.02□□□□□ -2.73
ZIC4Q8N9L1 MIR202-201ENST00000362219 110 ntBASIC-2.03□□□□□ -2.73
ZIC4Q8N9L1 RNY1P1-201ENST00000364372 112 ntBASIC-2.03□□□□□ -2.73
ZIC4Q8N9L1 RNU6-687P-201ENST00000516443 89 ntBASIC-2.03□□□□□ -2.73
ZIC4Q8N9L1 RNU6-231P-201ENST00000517122 103 ntBASIC-2.03□□□□□ -2.73
ZIC4Q8N9L1 MIR3134-201ENST00000579433 74 ntBASIC-2.03□□□□□ -2.73
ZIC4Q8N9L1 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.03□□□□□ -2.73
ZIC4Q8N9L1 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.04□□□□□ -2.74
ZIC4Q8N9L1 RNU6-810P-201ENST00000364001 107 ntBASIC-2.04□□□□□ -2.74
ZIC4Q8N9L1 RNU6-49P-201ENST00000384256 107 ntBASIC-2.04□□□□□ -2.74
ZIC4Q8N9L1 IGLL4P-201ENST00000614590 133 ntBASIC-2.04□□□□□ -2.74
ZIC4Q8N9L1 SNORD60-201ENST00000383903 83 ntBASIC-2.05□□□□□ -2.74
ZIC4Q8N9L1 RNU6-649P-201ENST00000384463 107 ntBASIC-2.05□□□□□ -2.74
ZIC4Q8N9L1 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.05□□□□□ -2.74
ZIC4Q8N9L1 snosnR66.1-201ENST00000391095 99 ntBASIC-2.05□□□□□ -2.74
ZIC4Q8N9L1 AC097484.2-201ENST00000509147 251 ntBASIC-2.05□□□□□ -2.74
ZIC4Q8N9L1 RNU6-361P-201ENST00000364454 107 ntBASIC-2.06□□□□□ -2.74
ZIC4Q8N9L1 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.06□□□□□ -2.74
ZIC4Q8N9L1 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.07□□□□□ -2.74
ZIC4Q8N9L1 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.07□□□□□ -2.74
ZIC4Q8N9L1 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.07□□□□□ -2.74
ZIC4Q8N9L1 SNORA17.4-201ENST00000391287 132 ntBASIC-2.08□□□□□ -2.74
ZIC4Q8N9L1 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms