Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC091912.2-201ENST00000624798 167 ntBASIC-0.75□□□□□ -2.53
COL5A3P25940 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.76□□□□□ -2.53
COL5A3P25940 RNU6-79P-201ENST00000362511 107 ntBASIC-0.76□□□□□ -2.53
COL5A3P25940 SNORD73B-201ENST00000364394 72 ntBASIC-0.76□□□□□ -2.53
COL5A3P25940 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.76□□□□□ -2.53
COL5A3P25940 MIR5591-201ENST00000578248 65 ntBASIC-0.76□□□□□ -2.53
COL5A3P25940 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.76□□□□□ -2.53
COL5A3P25940 SNORA25.5-201ENST00000363782 126 ntBASIC-0.77□□□□□ -2.53
COL5A3P25940 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.77□□□□□ -2.53
COL5A3P25940 RNU6-411P-201ENST00000384451 107 ntBASIC-0.77□□□□□ -2.53
COL5A3P25940 RNU6-663P-201ENST00000391105 106 ntBASIC-0.77□□□□□ -2.53
COL5A3P25940 MIR889-201ENST00000401280 79 ntBASIC-0.77□□□□□ -2.53
COL5A3P25940 HLA-S-202ENST00000425174 53 ntBASIC-0.77□□□□□ -2.53
COL5A3P25940 RNA5SP170-201ENST00000517150 101 ntBASIC-0.78□□□□□ -2.53
COL5A3P25940 RNU6-92P-201ENST00000605893 104 ntBASIC-0.78□□□□□ -2.53
COL5A3P25940 RNU6-247P-201ENST00000362636 107 ntBASIC-0.78□□□□□ -2.53
COL5A3P25940 RNU6-608P-201ENST00000383927 104 ntBASIC-0.78□□□□□ -2.53
COL5A3P25940 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.78□□□□□ -2.53
COL5A3P25940 SNORA26.2-201ENST00000390922 122 ntBASIC-0.78□□□□□ -2.53
COL5A3P25940 MIR1246-201ENST00000636535 73 ntBASIC-0.78□□□□□ -2.53
COL5A3P25940 SNORD1B-201ENST00000363091 84 ntBASIC-0.79□□□□□ -2.54
COL5A3P25940 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.79□□□□□ -2.54
COL5A3P25940 MIR7978-201ENST00000636158 59 ntBASIC-0.79□□□□□ -2.54
COL5A3P25940 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.8□□□□□ -2.54
COL5A3P25940 RNU6-669P-201ENST00000365575 107 ntBASIC-0.8□□□□□ -2.54
COL5A3P25940 RNU6-540P-201ENST00000384622 101 ntBASIC-0.8□□□□□ -2.54
COL5A3P25940 MIR520D-201ENST00000385002 87 ntBASIC-0.8□□□□□ -2.54
COL5A3P25940 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.8□□□□□ -2.54
COL5A3P25940 AC120024.2-201ENST00000576526 175 ntBASIC-0.8□□□□□ -2.54
COL5A3P25940 MIR6874-201ENST00000635894 71 ntBASIC-0.8□□□□□ -2.54
COL5A3P25940 RNU6-228P-201ENST00000362700 106 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 MIR579-201ENST00000385221 98 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 MIR4520-1-201ENST00000582609 70 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 SNORD60.1-201ENST00000362451 73 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 RNY4P29-201ENST00000410801 97 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 AC005520.4-201ENST00000604337 90 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 MIR6502-201ENST00000617296 76 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 MIR3202-2-201ENST00000635980 79 ntBASIC-0.81□□□□□ -2.54
COL5A3P25940 SNORA27.2-201ENST00000363365 126 ntBASIC-0.82□□□□□ -2.54
COL5A3P25940 RNU6-940P-201ENST00000363433 104 ntBASIC-0.82□□□□□ -2.54
COL5A3P25940 RNU6-974P-201ENST00000384099 108 ntBASIC-0.82□□□□□ -2.54
COL5A3P25940 RNU6-995P-201ENST00000391244 107 ntBASIC-0.82□□□□□ -2.54
COL5A3P25940 RNU6-634P-201ENST00000459134 106 ntBASIC-0.82□□□□□ -2.54
COL5A3P25940 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.82□□□□□ -2.54
COL5A3P25940 RNU6-172P-201ENST00000411000 93 ntBASIC-0.83□□□□□ -2.54
COL5A3P25940 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.83□□□□□ -2.54
COL5A3P25940 RNU6-279P-201ENST00000391297 101 ntBASIC-0.84□□□□□ -2.54
COL5A3P25940 SNORD30.1-201ENST00000391309 70 ntBASIC-0.84□□□□□ -2.54
COL5A3P25940 RNU6-857P-201ENST00000515893 110 ntBASIC-0.84□□□□□ -2.54
COL5A3P25940 RNU6-523P-201ENST00000516304 54 ntBASIC-0.84□□□□□ -2.54
COL5A3P25940 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.84□□□□□ -2.54
COL5A3P25940 MIR496-201ENST00000385226 102 ntBASIC-0.84□□□□□ -2.54
COL5A3P25940 RNU6-695P-201ENST00000391157 104 ntBASIC-0.84□□□□□ -2.54
COL5A3P25940 RNU6-226P-201ENST00000363778 107 ntBASIC-0.86□□□□□ -2.55
COL5A3P25940 RNU6-810P-201ENST00000364001 107 ntBASIC-0.86□□□□□ -2.55
COL5A3P25940 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.86□□□□□ -2.55
COL5A3P25940 AC013734.1-201ENST00000619329 111 ntBASIC-0.86□□□□□ -2.55
COL5A3P25940 MIR4662A-201ENST00000637499 67 ntBASIC-0.86□□□□□ -2.55
COL5A3P25940 SNORD60-201ENST00000383903 83 ntBASIC-0.87□□□□□ -2.55
COL5A3P25940 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.87□□□□□ -2.55
COL5A3P25940 SNORD116.2-201ENST00000391251 93 ntBASIC-0.87□□□□□ -2.55
COL5A3P25940 SNORD63.2-201ENST00000516303 64 ntBASIC-0.87□□□□□ -2.55
COL5A3P25940 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.88□□□□□ -2.55
COL5A3P25940 SNORA25.4-201ENST00000363666 124 ntBASIC-0.88□□□□□ -2.55
COL5A3P25940 SNORD78.1-201ENST00000390866 65 ntBASIC-0.88□□□□□ -2.55
COL5A3P25940 MIR3938-201ENST00000582157 103 ntBASIC-0.88□□□□□ -2.55
COL5A3P25940 MIR7110-201ENST00000612638 86 ntBASIC-0.88□□□□□ -2.55
COL5A3P25940 RNU6-563P-201ENST00000364872 108 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 RNU6-258P-201ENST00000390884 101 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 RNU6-871P-201ENST00000516122 100 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 MIR4511-201ENST00000582784 87 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 RNU6-400P-201ENST00000391173 106 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 U6.97-201ENST00000636904 101 ntBASIC-0.89□□□□□ -2.55
COL5A3P25940 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.9□□□□□ -2.55
COL5A3P25940 MIR1302-4-201ENST00000408701 150 ntBASIC-0.9□□□□□ -2.55
COL5A3P25940 RNU7-160P-201ENST00000516660 62 ntBASIC-0.9□□□□□ -2.55
COL5A3P25940 RNU6-649P-201ENST00000384463 107 ntBASIC-0.91□□□□□ -2.55
COL5A3P25940 RNA5SP93-201ENST00000362525 114 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 SNORD45.2-201ENST00000363552 72 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 MIR125B1-201ENST00000385236 88 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 SNORA40B-201ENST00000385573 128 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 MIR548H1-201ENST00000408610 102 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 AC103706.3-201ENST00000636297 85 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 RNU6-776P-201ENST00000364403 104 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 RNY3P8-201ENST00000411366 126 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 RNU7-119P-201ENST00000459279 63 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 RNU6-539P-201ENST00000516665 103 ntBASIC-0.92□□□□□ -2.56
COL5A3P25940 RNU6-520P-201ENST00000384717 104 ntBASIC-0.93□□□□□ -2.56
COL5A3P25940 AC110620.1-201ENST00000416042 228 ntBASIC-0.93□□□□□ -2.56
COL5A3P25940 RNU6-231P-201ENST00000517122 103 ntBASIC-0.93□□□□□ -2.56
COL5A3P25940 MIR4679-1-201ENST00000637619 75 ntBASIC-0.93□□□□□ -2.56
COL5A3P25940 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 273.7 ms