Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU6-394P-201ENST00000410735 107 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 RNU6-557P-201ENST00000516842 110 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 MIR548AI-201ENST00000579940 88 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 AC072026.1-201ENST00000605023 201 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 RNU6-92P-201ENST00000605893 104 ntBASIC-1.28□□□□□ -2.61
COL1A1P02452 MIR124-1-201ENST00000385275 85 ntBASIC-1.29□□□□□ -2.62
COL1A1P02452 SNORA40B-201ENST00000385573 128 ntBASIC-1.29□□□□□ -2.62
COL1A1P02452 RNU6-257P-201ENST00000410238 98 ntBASIC-1.29□□□□□ -2.62
COL1A1P02452 MIR8053-201ENST00000613344 75 ntBASIC-1.29□□□□□ -2.62
COL1A1P02452 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.29□□□□□ -2.62
COL1A1P02452 AC134503.1-201ENST00000633048 54 ntBASIC-1.29□□□□□ -2.62
COL1A1P02452 RNU6-854P-201ENST00000364036 107 ntBASIC-1.3□□□□□ -2.62
COL1A1P02452 RNA5SP173-201ENST00000364857 136 ntBASIC-1.3□□□□□ -2.62
COL1A1P02452 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.3□□□□□ -2.62
COL1A1P02452 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.3□□□□□ -2.62
COL1A1P02452 MIR568-201ENST00000385036 95 ntBASIC-1.3□□□□□ -2.62
COL1A1P02452 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.3□□□□□ -2.62
COL1A1P02452 RNU6-345P-201ENST00000517001 107 ntBASIC-1.3□□□□□ -2.62
COL1A1P02452 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.3□□□□□ -2.62
COL1A1P02452 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 SNORA20.1-201ENST00000364790 130 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 RNU6-497P-201ENST00000365316 104 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 SNORD116-21-201ENST00000384507 92 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
COL1A1P02452 AL451105.1-201ENST00000450005 189 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 RNU6-70P-201ENST00000516438 60 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 RNA5SP106-201ENST00000517274 100 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 SNORD114-13-201ENST00000364377 74 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 MIR154-201ENST00000385243 84 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 MIR548F4-201ENST00000408515 105 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 MTATP8P2-201ENST00000435212 202 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 RNU6-346P-201ENST00000516288 111 ntBASIC-1.31□□□□□ -2.62
COL1A1P02452 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.32□□□□□ -2.62
COL1A1P02452 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.32□□□□□ -2.62
COL1A1P02452 RNU6-895P-201ENST00000384125 103 ntBASIC-1.32□□□□□ -2.62
COL1A1P02452 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.32□□□□□ -2.62
COL1A1P02452 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 SNORA63-201ENST00000363450 132 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 SNORD116-22-201ENST00000384430 92 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 MIR3134-201ENST00000579433 74 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 MIR4801-201ENST00000582704 82 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 AL359920.1-201ENST00000618332 176 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 MIR548AH-201ENST00000637109 76 ntBASIC-1.33□□□□□ -2.62
COL1A1P02452 MT-TD-201ENST00000387419 68 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 SNORA40-201ENST00000388090 126 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 SNORD115.2-201ENST00000391126 59 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 MIR1302-5-201ENST00000408164 150 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 MTND5P20-201ENST00000448677 143 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 RNU7-120P-201ENST00000459334 63 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 RNU6-542P-201ENST00000516405 103 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 MIR1297-201ENST00000637311 77 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 AC006160.2-201ENST00000637708 154 ntBASIC-1.34□□□□□ -2.62
COL1A1P02452 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.35□□□□□ -2.63
COL1A1P02452 RNU6-797P-201ENST00000363101 109 ntBASIC-1.35□□□□□ -2.63
COL1A1P02452 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.35□□□□□ -2.63
COL1A1P02452 AC139453.2-201ENST00000487255 133 ntBASIC-1.35□□□□□ -2.63
COL1A1P02452 AC062037.2-201ENST00000610137 73 ntBASIC-1.35□□□□□ -2.63
COL1A1P02452 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.36□□□□□ -2.63
COL1A1P02452 MIR450A1-201ENST00000362262 91 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 MIR488-201ENST00000365739 83 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 AC008737.2-201ENST00000599446 118 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 AC062037.1-201ENST00000605302 128 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 RNU6-411P-201ENST00000384451 107 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 RNU6-788P-201ENST00000390967 104 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 RNU6-687P-201ENST00000516443 89 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 RNU6-255P-201ENST00000516957 105 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 RNU6-419P-201ENST00000517030 63 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 RNU6-176P-201ENST00000517196 105 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 AL117187.1-201ENST00000555482 181 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 MALAT1.1-201ENST00000618249 95 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 U6.95-201ENST00000636931 70 ntBASIC-1.37□□□□□ -2.63
COL1A1P02452 SNORD45.2-201ENST00000363552 72 ntBASIC-1.38□□□□□ -2.63
COL1A1P02452 SNORA25.5-201ENST00000363782 126 ntBASIC-1.38□□□□□ -2.63
COL1A1P02452 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.38□□□□□ -2.63
COL1A1P02452 MTCYBP6-201ENST00000441810 138 ntBASIC-1.38□□□□□ -2.63
COL1A1P02452 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.38□□□□□ -2.63
COL1A1P02452 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.39□□□□□ -2.63
COL1A1P02452 RNA5SP224-201ENST00000365069 126 ntBASIC-1.39□□□□□ -2.63
COL1A1P02452 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.39□□□□□ -2.63
COL1A1P02452 SNORD45C-201ENST00000383893 79 ntBASIC-1.39□□□□□ -2.63
COL1A1P02452 MIR545-201ENST00000385085 106 ntBASIC-1.4□□□□□ -2.63
COL1A1P02452 RNU6-822P-201ENST00000362707 106 ntBASIC-1.41□□□□□ -2.63
COL1A1P02452 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.41□□□□□ -2.63
COL1A1P02452 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.41□□□□□ -2.63
COL1A1P02452 MIR656-201ENST00000385224 78 ntBASIC-1.41□□□□□ -2.63
COL1A1P02452 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.41□□□□□ -2.63
COL1A1P02452 RNU6-122P-201ENST00000516818 107 ntBASIC-1.41□□□□□ -2.63
COL1A1P02452 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.41□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 249.9 ms